EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016467 (Gene tree)
Gene ID: 108242537
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 2687 bases
Position: chrLWHD01000102.1:1093354-1096040
Accession: 108242537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022167	Ribosomal_S18	PF01084.20	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022452	-	992	XM_017427414	ENSKMAP00000022167	128 (aa)	XP_017282903	UPI0007F90922

Gene Model

Click here to download ENSKMAG00000016467's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016467	mrps18c	100	68.992	ENSAPOG00000019045	mrps18c	100	68.992	Acanthochromis_polyacanthus
ENSKMAG00000016467	mrps18c	72	80.435	ENSACIG00000020253	mrps18c	91	80.435	Amphilophus_citrinellus
ENSKMAG00000016467	mrps18c	100	67.692	ENSAOCG00000014338	mrps18c	100	67.692	Amphiprion_ocellaris
ENSKMAG00000016467	mrps18c	100	67.692	ENSAPEG00000022956	mrps18c	100	67.692	Amphiprion_percula
ENSKMAG00000016467	mrps18c	68	87.356	ENSAPEG00000023068	-	88	81.720	Amphiprion_percula
ENSKMAG00000016467	mrps18c	100	73.846	ENSATEG00000023417	mrps18c	100	73.846	Anabas_testudineus
ENSKMAG00000016467	mrps18c	70	62.921	ENSAPLG00000012544	-	86	62.921	Anas_platyrhynchos
ENSKMAG00000016467	mrps18c	72	86.957	ENSACLG00000010521	mrps18c	90	86.957	Astatotilapia_calliptera
ENSKMAG00000016467	mrps18c	71	75.824	ENSAMXG00000012238	mrps18c	92	75.824	Astyanax_mexicanus
ENSKMAG00000016467	mrps18c	91	57.265	ENSCPBG00000007783	-	69	57.265	Chrysemys_picta_bellii
ENSKMAG00000016467	mrps18c	74	75.789	ENSCSEG00000000711	mrps18c	92	59.000	Cynoglossus_semilaevis
ENSKMAG00000016467	mrps18c	100	70.312	ENSCVAG00000020169	mrps18c	100	70.312	Cyprinodon_variegatus
ENSKMAG00000016467	mrps18c	94	65.323	ENSDARG00000069624	mrps18c	91	65.323	Danio_rerio
ENSKMAG00000016467	mrps18c	84	70.000	ENSELUG00000024603	mrps18c	83	70.000	Esox_lucius
ENSKMAG00000016467	mrps18c	100	76.562	ENSFHEG00000018752	-	100	76.562	Fundulus_heteroclitus
ENSKMAG00000016467	mrps18c	100	76.562	ENSFHEG00000015550	mrps18c	95	76.562	Fundulus_heteroclitus
ENSKMAG00000016467	mrps18c	73	61.702	ENSGALG00000023191	MRPS18C	65	61.702	Gallus_gallus
ENSKMAG00000016467	mrps18c	100	75.000	ENSGAFG00000008048	mrps18c	83	75.000	Gambusia_affinis
ENSKMAG00000016467	mrps18c	95	54.688	ENSGAGG00000015144	-	90	54.688	Gopherus_agassizii
ENSKMAG00000016467	mrps18c	100	70.769	ENSHBUG00000002008	mrps18c	100	70.769	Haplochromis_burtoni
ENSKMAG00000016467	mrps18c	94	68.800	ENSHCOG00000013161	mrps18c	95	68.800	Hippocampus_comes
ENSKMAG00000016467	mrps18c	71	71.429	ENSIPUG00000003783	mrps18c	88	71.429	Ictalurus_punctatus
ENSKMAG00000016467	mrps18c	100	73.077	ENSLBEG00000021861	mrps18c	100	73.077	Labrus_bergylta
ENSKMAG00000016467	mrps18c	100	73.077	ENSLBEG00000019174	mrps18c	100	73.077	Labrus_bergylta
ENSKMAG00000016467	mrps18c	98	55.303	ENSLACG00000011243	mrps18c	100	55.303	Latimeria_chalumnae
ENSKMAG00000016467	mrps18c	73	71.277	ENSLOCG00000012115	mrps18c	70	71.277	Lepisosteus_oculatus
ENSKMAG00000016467	mrps18c	100	65.672	ENSMAMG00000012386	mrps18c	100	65.672	Mastacembelus_armatus
ENSKMAG00000016467	mrps18c	100	70.769	ENSMZEG00005023278	mrps18c	100	70.769	Maylandia_zebra
ENSKMAG00000016467	mrps18c	72	89.130	ENSMMOG00000011316	mrps18c	70	89.130	Mola_mola
ENSKMAG00000016467	mrps18c	100	70.769	ENSNBRG00000006182	mrps18c	100	70.769	Neolamprologus_brichardi
ENSKMAG00000016467	mrps18c	70	67.416	ENSMEUG00000010972	-	70	67.416	Notamacropus_eugenii
ENSKMAG00000016467	mrps18c	100	70.769	ENSONIG00000012527	mrps18c	92	83.871	Oreochromis_niloticus
ENSKMAG00000016467	mrps18c	100	67.442	ENSORLG00015006869	mrps18c	100	67.442	Oryzias_latipes_hsok
ENSKMAG00000016467	mrps18c	70	75.281	ENSOMEG00000005009	mrps18c	86	75.281	Oryzias_melastigma
ENSKMAG00000016467	mrps18c	91	67.241	ENSPKIG00000021736	mrps18c	79	67.241	Paramormyrops_kingsleyae
ENSKMAG00000016467	mrps18c	71	80.220	ENSPMGG00000002991	mrps18c	92	80.220	Periophthalmus_magnuspinnatus
ENSKMAG00000016467	mrps18c	100	75.000	ENSPFOG00000002351	mrps18c	83	75.000	Poecilia_formosa
ENSKMAG00000016467	mrps18c	100	75.000	ENSPLAG00000015187	mrps18c	100	75.000	Poecilia_latipinna
ENSKMAG00000016467	mrps18c	100	74.219	ENSPMEG00000014488	mrps18c	83	74.219	Poecilia_mexicana
ENSKMAG00000016467	mrps18c	65	81.928	ENSPREG00000012593	mrps18c	85	81.928	Poecilia_reticulata
ENSKMAG00000016467	mrps18c	100	70.000	ENSPNYG00000010654	mrps18c	100	70.000	Pundamilia_nyererei
ENSKMAG00000016467	mrps18c	76	69.072	ENSPNAG00000009350	mrps18c	91	69.072	Pygocentrus_nattereri
ENSKMAG00000016467	mrps18c	100	63.846	ENSSFOG00015019444	mrps18c	93	63.846	Scleropages_formosus
ENSKMAG00000016467	mrps18c	100	72.656	ENSSDUG00000015676	mrps18c	100	72.656	Seriola_dumerili
ENSKMAG00000016467	mrps18c	83	72.414	ENSSLDG00000002034	mrps18c	90	72.414	Seriola_lalandi_dorsalis
ENSKMAG00000016467	mrps18c	74	61.053	ENSSPUG00000013990	-	69	61.053	Sphenodon_punctatus
ENSKMAG00000016467	mrps18c	99	66.667	ENSSPAG00000008687	mrps18c	99	66.667	Stegastes_partitus
ENSKMAG00000016467	mrps18c	100	67.692	ENSTRUG00000024403	mrps18c	100	67.692	Takifugu_rubripes
ENSKMAG00000016467	mrps18c	100	70.000	ENSTNIG00000005674	mrps18c	100	70.000	Tetraodon_nigroviridis
ENSKMAG00000016467	mrps18c	70	69.663	ENSXETG00000027597	mrps18c	68	69.663	Xenopus_tropicalis
ENSKMAG00000016467	mrps18c	100	67.969	ENSXCOG00000016208	mrps18c	87	81.609	Xiphophorus_couchianus
ENSKMAG00000016467	mrps18c	100	75.000	ENSXMAG00000012555	mrps18c	83	75.000	Xiphophorus_maculatus