EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016476 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4604 bases
Position: chrLWHD01000027.1:1279908-1284511
Accession: 108234464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022217	Glu-tRNAGln	PF02686.15	1.4e-07	1	1
ENSKMAP00000022196	Glu-tRNAGln	PF02686.15	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022503	-	372	XM_017413672	ENSKMAP00000022217	123 (aa)	XP_017269161	-
ENSKMAT00000022481	-	402	-	ENSKMAP00000022196	133 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000016476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016476	gatc	77	60.825	ENSG00000257218	GATC	100	65.957	Homo_sapiens
ENSKMAG00000016476	gatc	77	61.856	ENSAMEG00000013298	-	82	56.757	Ailuropoda_melanoleuca
ENSKMAG00000016476	gatc	92	68.293	ENSACIG00000016853	gatc	88	68.293	Amphilophus_citrinellus
ENSKMAG00000016476	gatc	96	80.800	ENSAOCG00000014641	gatc	100	80.800	Amphiprion_ocellaris
ENSKMAG00000016476	gatc	100	80.769	ENSAPEG00000023411	gatc	67	80.769	Amphiprion_percula
ENSKMAG00000016476	gatc	83	72.727	ENSATEG00000009237	gatc	91	72.727	Anabas_testudineus
ENSKMAG00000016476	gatc	78	66.327	ENSACAG00000002868	-	73	66.327	Anolis_carolinensis
ENSKMAG00000016476	gatc	77	61.856	ENSANAG00000034389	-	78	58.491	Aotus_nancymaae
ENSKMAG00000016476	gatc	99	78.295	ENSACLG00000026251	gatc	67	78.295	Astatotilapia_calliptera
ENSKMAG00000016476	gatc	99	72.868	ENSAMXG00000004252	gatc	57	72.868	Astyanax_mexicanus
ENSKMAG00000016476	gatc	93	51.538	ENSBTAG00000012791	GATC	95	51.538	Bos_taurus
ENSKMAG00000016476	gatc	89	38.462	WBGene00013433	Y66D12A.7	67	38.462	Caenorhabditis_elegans
ENSKMAG00000016476	gatc	77	61.856	ENSCJAG00000001183	-	53	61.856	Callithrix_jacchus
ENSKMAG00000016476	gatc	77	62.887	ENSCAFG00000010311	-	71	62.887	Canis_familiaris
ENSKMAG00000016476	gatc	77	62.887	ENSCAFG00020020606	-	71	62.887	Canis_lupus_dingo
ENSKMAG00000016476	gatc	92	50.388	ENSCHIG00000019423	-	95	50.388	Capra_hircus
ENSKMAG00000016476	gatc	77	58.763	ENSTSYG00000006845	-	71	58.763	Carlito_syrichta
ENSKMAG00000016476	gatc	74	59.783	ENSCPOG00000026436	-	63	59.783	Cavia_porcellus
ENSKMAG00000016476	gatc	77	61.856	ENSCCAG00000022235	-	85	51.724	Cebus_capucinus
ENSKMAG00000016476	gatc	77	60.825	ENSCATG00000038807	GATC	85	52.174	Cercocebus_atys
ENSKMAG00000016476	gatc	83	54.955	ENSCLAG00000011015	-	57	62.637	Chinchilla_lanigera
ENSKMAG00000016476	gatc	77	61.856	ENSCSAG00000002259	GATC	85	52.174	Chlorocebus_sabaeus
ENSKMAG00000016476	gatc	77	60.825	ENSCHOG00000009235	-	82	54.054	Choloepus_hoffmanni
ENSKMAG00000016476	gatc	98	59.055	ENSCPBG00000011342	-	68	59.055	Chrysemys_picta_bellii
ENSKMAG00000016476	gatc	77	60.825	ENSCANG00000031071	GATC	78	56.604	Colobus_angolensis_palliatus
ENSKMAG00000016476	gatc	74	61.290	ENSCGRG00001019220	-	67	56.731	Cricetulus_griseus_chok1gshd
ENSKMAG00000016476	gatc	74	61.290	ENSCGRG00000004184	-	67	56.731	Cricetulus_griseus_crigri
ENSKMAG00000016476	gatc	85	73.832	ENSCSEG00000016618	-	63	73.832	Cynoglossus_semilaevis
ENSKMAG00000016476	gatc	98	72.441	ENSCSEG00000007798	gatc	64	72.441	Cynoglossus_semilaevis
ENSKMAG00000016476	gatc	100	80.769	ENSCVAG00000004364	gatc	69	80.769	Cyprinodon_variegatus
ENSKMAG00000016476	gatc	100	73.077	ENSDARG00000056855	gatc	71	73.077	Danio_rerio
ENSKMAG00000016476	gatc	76	60.000	ENSDNOG00000012593	-	56	59.184	Dasypus_novemcinctus
ENSKMAG00000016476	gatc	67	49.412	FBgn0064115	GatC	57	49.412	Drosophila_melanogaster
ENSKMAG00000016476	gatc	79	47.619	ENSETEG00000002604	-	77	47.619	Echinops_telfairi
ENSKMAG00000016476	gatc	76	51.064	ENSEBUG00000008772	gatc	59	50.485	Eptatretus_burgeri
ENSKMAG00000016476	gatc	91	51.220	ENSECAG00000011118	-	83	51.220	Equus_caballus
ENSKMAG00000016476	gatc	76	58.333	ENSEEUG00000011638	-	71	58.333	Erinaceus_europaeus
ENSKMAG00000016476	gatc	91	69.106	ENSELUG00000012608	gatc	71	75.258	Esox_lucius
ENSKMAG00000016476	gatc	77	60.825	ENSFCAG00000038718	-	80	56.881	Felis_catus
ENSKMAG00000016476	gatc	88	57.273	ENSFALG00000007564	-	72	57.273	Ficedula_albicollis
ENSKMAG00000016476	gatc	83	60.577	ENSFDAG00000018720	-	76	60.577	Fukomys_damarensis
ENSKMAG00000016476	gatc	100	80.000	ENSFHEG00000014992	GATC	70	80.000	Fundulus_heteroclitus
ENSKMAG00000016476	gatc	99	73.810	ENSGMOG00000008742	gatc	79	73.810	Gadus_morhua
ENSKMAG00000016476	gatc	83	60.577	ENSGALG00000007195	-	74	61.165	Gallus_gallus
ENSKMAG00000016476	gatc	85	80.180	ENSGAFG00000012801	gatc	70	80.180	Gambusia_affinis
ENSKMAG00000016476	gatc	99	77.519	ENSGACG00000008973	gatc	66	77.519	Gasterosteus_aculeatus
ENSKMAG00000016476	gatc	98	59.843	ENSGAGG00000016018	-	70	59.843	Gopherus_agassizii
ENSKMAG00000016476	gatc	84	52.174	ENSGGOG00000026821	GATC	89	52.174	Gorilla_gorilla
ENSKMAG00000016476	gatc	99	78.295	ENSHBUG00000006827	gatc	67	78.295	Haplochromis_burtoni
ENSKMAG00000016476	gatc	83	59.615	ENSHGLG00000011394	GATC	76	59.615	Heterocephalus_glaber_female
ENSKMAG00000016476	gatc	83	56.731	ENSHGLG00100018850	-	75	56.731	Heterocephalus_glaber_male
ENSKMAG00000016476	gatc	98	76.984	ENSHCOG00000009209	gatc	100	76.984	Hippocampus_comes
ENSKMAG00000016476	gatc	99	71.318	ENSIPUG00000023072	gatc	60	71.318	Ictalurus_punctatus
ENSKMAG00000016476	gatc	73	65.217	ENSSTOG00000025740	-	60	65.217	Ictidomys_tridecemlineatus
ENSKMAG00000016476	gatc	74	62.366	ENSJJAG00000000369	Gatc	59	62.366	Jaculus_jaculus
ENSKMAG00000016476	gatc	100	78.462	ENSLBEG00000007603	gatc	72	78.462	Labrus_bergylta
ENSKMAG00000016476	gatc	95	58.871	ENSLACG00000018239	-	64	58.871	Latimeria_chalumnae
ENSKMAG00000016476	gatc	99	68.217	ENSLOCG00000004056	gatc	70	68.217	Lepisosteus_oculatus
ENSKMAG00000016476	gatc	73	62.637	ENSLAFG00000006384	-	64	61.224	Loxodonta_africana
ENSKMAG00000016476	gatc	77	60.825	ENSMFAG00000034197	GATC	85	52.174	Macaca_fascicularis
ENSKMAG00000016476	gatc	77	60.825	ENSMMUG00000046665	GATC	85	52.174	Macaca_mulatta
ENSKMAG00000016476	gatc	77	60.825	ENSMNEG00000034653	GATC	85	52.174	Macaca_nemestrina
ENSKMAG00000016476	gatc	77	61.856	ENSMLEG00000039862	GATC	85	53.043	Mandrillus_leucophaeus
ENSKMAG00000016476	gatc	99	78.295	ENSMAMG00000015851	gatc	71	78.295	Mastacembelus_armatus
ENSKMAG00000016476	gatc	99	78.295	ENSMZEG00005016072	gatc	67	78.295	Maylandia_zebra
ENSKMAG00000016476	gatc	83	62.500	ENSMGAG00000008733	-	98	62.500	Meleagris_gallopavo
ENSKMAG00000016476	gatc	74	62.366	ENSMAUG00000012756	Gatc	60	62.366	Mesocricetus_auratus
ENSKMAG00000016476	gatc	77	62.887	ENSMICG00000008669	-	85	54.310	Microcebus_murinus
ENSKMAG00000016476	gatc	82	56.881	ENSMOCG00000005051	Gatc	60	62.366	Microtus_ochrogaster
ENSKMAG00000016476	gatc	93	69.167	ENSMMOG00000017695	gatc	89	76.636	Mola_mola
ENSKMAG00000016476	gatc	77	61.856	ENSMODG00000003152	-	73	61.856	Monodelphis_domestica
ENSKMAG00000016476	gatc	76	59.406	MGP_CAROLIEiJ_G0027623	Gatc	58	62.222	Mus_caroli
ENSKMAG00000016476	gatc	72	62.222	ENSMUSG00000029536	Gatc	58	62.222	Mus_musculus
ENSKMAG00000016476	gatc	72	63.333	MGP_PahariEiJ_G0024203	Gatc	58	63.333	Mus_pahari
ENSKMAG00000016476	gatc	72	61.111	MGP_SPRETEiJ_G0028621	Gatc	58	61.111	Mus_spretus
ENSKMAG00000016476	gatc	77	61.856	ENSMPUG00000003183	-	80	57.798	Mustela_putorius_furo
ENSKMAG00000016476	gatc	76	60.000	ENSMLUG00000010341	-	94	60.000	Myotis_lucifugus
ENSKMAG00000016476	gatc	74	59.000	ENSNGAG00000004734	Gatc	66	59.000	Nannospalax_galili
ENSKMAG00000016476	gatc	99	78.295	ENSNBRG00000007810	gatc	67	78.295	Neolamprologus_brichardi
ENSKMAG00000016476	gatc	77	60.825	ENSNLEG00000015651	GATC	71	60.825	Nomascus_leucogenys
ENSKMAG00000016476	gatc	77	58.763	ENSMEUG00000004064	-	81	57.843	Notamacropus_eugenii
ENSKMAG00000016476	gatc	78	60.204	ENSOPRG00000004226	-	72	60.204	Ochotona_princeps
ENSKMAG00000016476	gatc	78	55.769	ENSODEG00000005919	-	70	55.769	Octodon_degus
ENSKMAG00000016476	gatc	99	75.573	ENSONIG00000013444	gatc	90	75.573	Oreochromis_niloticus
ENSKMAG00000016476	gatc	80	60.000	ENSOCUG00000009867	-	74	60.000	Oryctolagus_cuniculus
ENSKMAG00000016476	gatc	93	72.727	ENSORLG00000007156	gatc	100	72.727	Oryzias_latipes
ENSKMAG00000016476	gatc	100	73.077	ENSORLG00020014991	gatc	69	73.077	Oryzias_latipes_hni
ENSKMAG00000016476	gatc	100	72.308	ENSORLG00015003450	gatc	69	72.308	Oryzias_latipes_hsok
ENSKMAG00000016476	gatc	100	74.615	ENSOMEG00000002280	gatc	70	74.615	Oryzias_melastigma
ENSKMAG00000016476	gatc	80	60.396	ENSOGAG00000003850	-	93	60.396	Otolemur_garnettii
ENSKMAG00000016476	gatc	82	55.340	ENSOARG00000012338	-	80	55.340	Ovis_aries
ENSKMAG00000016476	gatc	77	59.794	ENSPPAG00000029164	GATC	85	51.304	Pan_paniscus
ENSKMAG00000016476	gatc	77	61.856	ENSPPRG00000000929	-	80	57.798	Panthera_pardus
ENSKMAG00000016476	gatc	77	61.856	ENSPTIG00000009889	-	80	57.798	Panthera_tigris_altaica
ENSKMAG00000016476	gatc	77	59.794	ENSPTRG00000049887	GATC	77	56.731	Pan_troglodytes
ENSKMAG00000016476	gatc	77	59.794	ENSPANG00000033975	GATC	85	52.174	Papio_anubis
ENSKMAG00000016476	gatc	100	66.154	ENSPKIG00000024856	gatc	67	66.154	Paramormyrops_kingsleyae
ENSKMAG00000016476	gatc	84	63.810	ENSPSIG00000011112	-	90	63.810	Pelodiscus_sinensis
ENSKMAG00000016476	gatc	97	76.984	ENSPMGG00000018829	gatc	80	76.984	Periophthalmus_magnuspinnatus
ENSKMAG00000016476	gatc	74	63.441	ENSPEMG00000000665	Gatc	60	63.441	Peromyscus_maniculatus_bairdii
ENSKMAG00000016476	gatc	89	54.545	ENSPCIG00000025999	-	79	54.545	Phascolarctos_cinereus
ENSKMAG00000016476	gatc	100	82.308	ENSPFOG00000011603	gatc	70	82.308	Poecilia_formosa
ENSKMAG00000016476	gatc	100	82.308	ENSPLAG00000002471	gatc	70	82.308	Poecilia_latipinna
ENSKMAG00000016476	gatc	100	81.538	ENSPMEG00000020958	gatc	70	81.538	Poecilia_mexicana
ENSKMAG00000016476	gatc	98	77.869	ENSPREG00000022256	gatc	77	77.869	Poecilia_reticulata
ENSKMAG00000016476	gatc	83	59.615	ENSPPYG00000005030	GATC	85	52.174	Pongo_abelii
ENSKMAG00000016476	gatc	86	52.991	ENSPCAG00000013864	-	86	52.991	Procavia_capensis
ENSKMAG00000016476	gatc	92	48.000	ENSPCOG00000015558	-	97	48.000	Propithecus_coquereli
ENSKMAG00000016476	gatc	86	53.846	ENSPCOG00000009493	-	91	53.846	Propithecus_coquereli
ENSKMAG00000016476	gatc	73	63.043	ENSPVAG00000002228	-	68	63.043	Pteropus_vampyrus
ENSKMAG00000016476	gatc	99	77.519	ENSPNYG00000016015	gatc	67	77.519	Pundamilia_nyererei
ENSKMAG00000016476	gatc	99	71.318	ENSPNAG00000001239	gatc	58	71.318	Pygocentrus_nattereri
ENSKMAG00000016476	gatc	73	65.217	ENSRNOG00000001161	Gatc	59	65.217	Rattus_norvegicus
ENSKMAG00000016476	gatc	68	65.556	ENSRNOG00000045621	Gatc	59	65.556	Rattus_norvegicus
ENSKMAG00000016476	gatc	76	61.053	ENSRBIG00000033363	GATC	78	55.660	Rhinopithecus_bieti
ENSKMAG00000016476	gatc	76	61.053	ENSRROG00000042802	GATC	78	55.660	Rhinopithecus_roxellana
ENSKMAG00000016476	gatc	77	59.794	ENSSBOG00000033750	-	71	59.794	Saimiri_boliviensis_boliviensis
ENSKMAG00000016476	gatc	82	55.340	ENSSHAG00000005745	-	97	55.340	Sarcophilus_harrisii
ENSKMAG00000016476	gatc	93	69.231	ENSSFOG00015002508	gatc	69	67.890	Scleropages_formosus
ENSKMAG00000016476	gatc	100	79.231	ENSSMAG00000014280	gatc	72	79.231	Scophthalmus_maximus
ENSKMAG00000016476	gatc	100	78.462	ENSSDUG00000012206	gatc	67	78.462	Seriola_dumerili
ENSKMAG00000016476	gatc	100	77.692	ENSSLDG00000025159	gatc	66	77.692	Seriola_lalandi_dorsalis
ENSKMAG00000016476	gatc	91	55.085	ENSSPUG00000015693	-	69	63.158	Sphenodon_punctatus
ENSKMAG00000016476	gatc	100	80.000	ENSSPAG00000011860	gatc	68	80.000	Stegastes_partitus
ENSKMAG00000016476	gatc	85	59.048	ENSSSCG00000032747	-	85	54.701	Sus_scrofa
ENSKMAG00000016476	gatc	86	60.185	ENSTGUG00000009561	-	100	60.185	Taeniopygia_guttata
ENSKMAG00000016476	gatc	99	74.419	ENSTRUG00000021596	gatc	65	74.419	Takifugu_rubripes
ENSKMAG00000016476	gatc	99	75.969	ENSTNIG00000015879	gatc	62	75.969	Tetraodon_nigroviridis
ENSKMAG00000016476	gatc	85	54.310	ENSTTRG00000000144	GATC	85	54.310	Tursiops_truncatus
ENSKMAG00000016476	gatc	77	62.887	ENSUAMG00000015523	-	82	56.757	Ursus_americanus
ENSKMAG00000016476	gatc	77	62.887	ENSVVUG00000021055	-	71	62.887	Vulpes_vulpes
ENSKMAG00000016476	gatc	85	83.178	ENSXCOG00000017087	gatc	78	83.178	Xiphophorus_couchianus
ENSKMAG00000016476	gatc	99	79.845	ENSXMAG00000018267	gatc	70	79.845	Xiphophorus_maculatus