EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016495 (Gene tree)
Gene ID: 108250778
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3989 bases
Position: chrLWHD01000692.1:64151-68139
Accession: 108250778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022212	RNA_pol_Rpc34	PF05158.12	2e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022497	-	777	XM_025002723	ENSKMAP00000022212	258 (aa)	XP_024858491	-

Gene Model

Click here to download ENSKMAG00000016495's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG
kmr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016495	polr3f	100	81.818	ENSG00000132664	POLR3F	87	81.818	Homo_sapiens
ENSKMAG00000016495	polr3f	100	88.000	ENSAPOG00000008271	polr3f	90	88.000	Acanthochromis_polyacanthus
ENSKMAG00000016495	polr3f	100	81.455	ENSAMEG00000005222	POLR3F	87	81.455	Ailuropoda_melanoleuca
ENSKMAG00000016495	polr3f	100	93.130	ENSACIG00000006705	polr3f	89	93.130	Amphilophus_citrinellus
ENSKMAG00000016495	polr3f	100	88.727	ENSAOCG00000000687	polr3f	87	88.727	Amphiprion_ocellaris
ENSKMAG00000016495	polr3f	100	88.364	ENSAPEG00000015263	polr3f	87	88.364	Amphiprion_percula
ENSKMAG00000016495	polr3f	100	88.364	ENSATEG00000015539	polr3f	100	88.727	Anabas_testudineus
ENSKMAG00000016495	polr3f	100	82.909	ENSAPLG00000005533	POLR3F	100	82.909	Anas_platyrhynchos
ENSKMAG00000016495	polr3f	100	80.000	ENSACAG00000014293	POLR3F	89	80.000	Anolis_carolinensis
ENSKMAG00000016495	polr3f	100	82.182	ENSANAG00000026726	POLR3F	87	82.182	Aotus_nancymaae
ENSKMAG00000016495	polr3f	100	88.000	ENSACLG00000003615	polr3f	87	88.000	Astatotilapia_calliptera
ENSKMAG00000016495	polr3f	100	85.455	ENSAMXG00000036020	polr3f	88	85.455	Astyanax_mexicanus
ENSKMAG00000016495	polr3f	100	81.091	ENSBTAG00000008825	POLR3F	87	81.091	Bos_taurus
ENSKMAG00000016495	polr3f	99	34.074	WBGene00021112	W09C3.4	86	34.074	Caenorhabditis_elegans
ENSKMAG00000016495	polr3f	100	82.182	ENSCJAG00000005159	POLR3F	87	82.182	Callithrix_jacchus
ENSKMAG00000016495	polr3f	100	81.455	ENSCAFG00000005420	POLR3F	87	81.455	Canis_familiaris
ENSKMAG00000016495	polr3f	100	81.455	ENSCAFG00020027500	POLR3F	87	81.455	Canis_lupus_dingo
ENSKMAG00000016495	polr3f	100	81.091	ENSCHIG00000014743	POLR3F	87	81.091	Capra_hircus
ENSKMAG00000016495	polr3f	100	81.091	ENSTSYG00000004207	POLR3F	87	81.091	Carlito_syrichta
ENSKMAG00000016495	polr3f	59	70.779	ENSCAPG00000008423	POLR3F	75	70.779	Cavia_aperea
ENSKMAG00000016495	polr3f	100	81.818	ENSCPOG00000002400	POLR3F	87	81.818	Cavia_porcellus
ENSKMAG00000016495	polr3f	100	71.273	ENSCCAG00000021800	POLR3F	85	71.273	Cebus_capucinus
ENSKMAG00000016495	polr3f	100	81.455	ENSCATG00000019507	POLR3F	87	81.455	Cercocebus_atys
ENSKMAG00000016495	polr3f	100	81.455	ENSCLAG00000016296	POLR3F	87	81.455	Chinchilla_lanigera
ENSKMAG00000016495	polr3f	100	81.455	ENSCSAG00000011513	POLR3F	87	81.455	Chlorocebus_sabaeus
ENSKMAG00000016495	polr3f	67	84.270	ENSCHOG00000013268	POLR3F	60	84.270	Choloepus_hoffmanni
ENSKMAG00000016495	polr3f	100	81.818	ENSCPBG00000023473	POLR3F	100	81.818	Chrysemys_picta_bellii
ENSKMAG00000016495	polr3f	98	61.111	ENSCING00000001212	-	85	61.111	Ciona_intestinalis
ENSKMAG00000016495	polr3f	65	64.497	ENSCSAVG00000003340	-	96	64.497	Ciona_savignyi
ENSKMAG00000016495	polr3f	90	80.800	ENSCANG00000037390	POLR3F	86	80.800	Colobus_angolensis_palliatus
ENSKMAG00000016495	polr3f	100	81.818	ENSCGRG00001002032	Polr3f	87	81.818	Cricetulus_griseus_chok1gshd
ENSKMAG00000016495	polr3f	100	81.818	ENSCGRG00000010852	Polr3f	87	81.818	Cricetulus_griseus_crigri
ENSKMAG00000016495	polr3f	100	86.182	ENSCSEG00000001247	polr3f	87	86.182	Cynoglossus_semilaevis
ENSKMAG00000016495	polr3f	100	89.888	ENSCVAG00000007611	polr3f	87	89.888	Cyprinodon_variegatus
ENSKMAG00000016495	polr3f	100	84.727	ENSDARG00000012572	polr3f	88	84.727	Danio_rerio
ENSKMAG00000016495	polr3f	100	79.562	ENSDNOG00000010719	POLR3F	87	79.562	Dasypus_novemcinctus
ENSKMAG00000016495	polr3f	100	82.182	ENSDORG00000016352	Polr3f	87	82.182	Dipodomys_ordii
ENSKMAG00000016495	polr3f	89	56.957	FBgn0038951	CG5380	75	56.957	Drosophila_melanogaster
ENSKMAG00000016495	polr3f	57	61.486	ENSETEG00000015485	-	53	61.486	Echinops_telfairi
ENSKMAG00000016495	polr3f	100	74.182	ENSEBUG00000006783	polr3f	88	74.182	Eptatretus_burgeri
ENSKMAG00000016495	polr3f	100	81.818	ENSEASG00005002022	POLR3F	87	81.818	Equus_asinus_asinus
ENSKMAG00000016495	polr3f	100	81.818	ENSECAG00000009920	POLR3F	87	81.818	Equus_caballus
ENSKMAG00000016495	polr3f	75	92.000	ENSEEUG00000000184	POLR3F	67	92.000	Erinaceus_europaeus
ENSKMAG00000016495	polr3f	100	84.364	ENSELUG00000001558	polr3f	88	85.455	Esox_lucius
ENSKMAG00000016495	polr3f	100	81.455	ENSFCAG00000013828	POLR3F	87	81.455	Felis_catus
ENSKMAG00000016495	polr3f	100	82.909	ENSFALG00000007623	POLR3F	100	82.909	Ficedula_albicollis
ENSKMAG00000016495	polr3f	100	81.091	ENSFDAG00000002528	POLR3F	87	81.091	Fukomys_damarensis
ENSKMAG00000016495	polr3f	100	87.273	ENSFHEG00000006450	polr3f	87	87.273	Fundulus_heteroclitus
ENSKMAG00000016495	polr3f	100	82.909	ENSGALG00000008749	POLR3F	88	82.909	Gallus_gallus
ENSKMAG00000016495	polr3f	100	88.000	ENSGAFG00000003698	polr3f	87	88.000	Gambusia_affinis
ENSKMAG00000016495	polr3f	100	81.818	ENSGAGG00000006151	POLR3F	88	81.818	Gopherus_agassizii
ENSKMAG00000016495	polr3f	100	81.818	ENSGGOG00000011543	POLR3F	87	81.818	Gorilla_gorilla
ENSKMAG00000016495	polr3f	100	88.364	ENSHBUG00000013806	polr3f	87	88.364	Haplochromis_burtoni
ENSKMAG00000016495	polr3f	100	81.091	ENSHGLG00000011867	POLR3F	87	81.091	Heterocephalus_glaber_female
ENSKMAG00000016495	polr3f	100	81.091	ENSHGLG00100012577	POLR3F	87	81.091	Heterocephalus_glaber_male
ENSKMAG00000016495	polr3f	100	76.000	ENSHCOG00000011751	polr3f	87	76.000	Hippocampus_comes
ENSKMAG00000016495	polr3f	100	84.364	ENSIPUG00000013347	polr3f	88	84.364	Ictalurus_punctatus
ENSKMAG00000016495	polr3f	100	81.455	ENSSTOG00000013588	POLR3F	87	81.455	Ictidomys_tridecemlineatus
ENSKMAG00000016495	polr3f	100	81.455	ENSJJAG00000017513	Polr3f	87	81.455	Jaculus_jaculus
ENSKMAG00000016495	polr3f	90	95.690	ENSLBEG00000011998	polr3f	100	95.690	Labrus_bergylta
ENSKMAG00000016495	polr3f	100	82.909	ENSLACG00000009371	POLR3F	88	82.909	Latimeria_chalumnae
ENSKMAG00000016495	polr3f	100	84.364	ENSLOCG00000015701	polr3f	88	84.364	Lepisosteus_oculatus
ENSKMAG00000016495	polr3f	100	80.727	ENSLAFG00000004929	POLR3F	87	80.727	Loxodonta_africana
ENSKMAG00000016495	polr3f	100	81.455	ENSMFAG00000002227	POLR3F	87	81.455	Macaca_fascicularis
ENSKMAG00000016495	polr3f	100	81.455	ENSMMUG00000004143	POLR3F	100	81.455	Macaca_mulatta
ENSKMAG00000016495	polr3f	100	81.455	ENSMNEG00000033404	POLR3F	87	81.455	Macaca_nemestrina
ENSKMAG00000016495	polr3f	100	81.455	ENSMLEG00000021905	POLR3F	87	81.455	Mandrillus_leucophaeus
ENSKMAG00000016495	polr3f	100	88.000	ENSMAMG00000017975	polr3f	87	88.000	Mastacembelus_armatus
ENSKMAG00000016495	polr3f	100	88.000	ENSMZEG00005015134	polr3f	87	88.000	Maylandia_zebra
ENSKMAG00000016495	polr3f	100	82.909	ENSMGAG00000006691	POLR3F	88	82.909	Meleagris_gallopavo
ENSKMAG00000016495	polr3f	100	81.818	ENSMAUG00000020176	Polr3f	87	81.818	Mesocricetus_auratus
ENSKMAG00000016495	polr3f	100	81.455	ENSMICG00000044519	POLR3F	87	81.455	Microcebus_murinus
ENSKMAG00000016495	polr3f	100	81.818	ENSMOCG00000018352	Polr3f	87	81.818	Microtus_ochrogaster
ENSKMAG00000016495	polr3f	100	87.004	ENSMMOG00000018477	polr3f	93	87.365	Mola_mola
ENSKMAG00000016495	polr3f	100	82.182	ENSMODG00000005624	POLR3F	87	82.182	Monodelphis_domestica
ENSKMAG00000016495	polr3f	100	88.727	ENSMALG00000006685	polr3f	87	88.727	Monopterus_albus
ENSKMAG00000016495	polr3f	100	81.091	MGP_CAROLIEiJ_G0024385	Polr3f	87	81.091	Mus_caroli
ENSKMAG00000016495	polr3f	100	81.091	ENSMUSG00000027427	Polr3f	87	81.091	Mus_musculus
ENSKMAG00000016495	polr3f	100	81.091	MGP_PahariEiJ_G0025829	Polr3f	87	81.091	Mus_pahari
ENSKMAG00000016495	polr3f	100	81.091	MGP_SPRETEiJ_G0025304	Polr3f	87	81.091	Mus_spretus
ENSKMAG00000016495	polr3f	100	58.451	ENSMPUG00000001252	-	87	58.451	Mustela_putorius_furo
ENSKMAG00000016495	polr3f	100	81.455	ENSMLUG00000014844	POLR3F	87	81.455	Myotis_lucifugus
ENSKMAG00000016495	polr3f	100	81.091	ENSNGAG00000010898	Polr3f	87	81.091	Nannospalax_galili
ENSKMAG00000016495	polr3f	100	88.364	ENSNBRG00000020796	polr3f	87	88.364	Neolamprologus_brichardi
ENSKMAG00000016495	polr3f	100	81.818	ENSNLEG00000009778	POLR3F	87	81.818	Nomascus_leucogenys
ENSKMAG00000016495	polr3f	100	75.273	ENSMEUG00000010320	POLR3F	93	75.273	Notamacropus_eugenii
ENSKMAG00000016495	polr3f	100	81.455	ENSOPRG00000003385	POLR3F	87	81.455	Ochotona_princeps
ENSKMAG00000016495	polr3f	100	81.455	ENSODEG00000011521	POLR3F	87	81.455	Octodon_degus
ENSKMAG00000016495	polr3f	100	88.364	ENSONIG00000006858	polr3f	87	88.364	Oreochromis_niloticus
ENSKMAG00000016495	polr3f	100	82.545	ENSOANG00000001253	POLR3F	87	82.545	Ornithorhynchus_anatinus
ENSKMAG00000016495	polr3f	100	81.455	ENSOCUG00000015067	POLR3F	87	81.455	Oryctolagus_cuniculus
ENSKMAG00000016495	polr3f	100	86.182	ENSORLG00000022412	polr3f	87	86.909	Oryzias_latipes
ENSKMAG00000016495	polr3f	100	86.182	ENSORLG00020021944	polr3f	87	86.909	Oryzias_latipes_hni
ENSKMAG00000016495	polr3f	100	80.000	ENSOGAG00000002916	POLR3F	87	80.000	Otolemur_garnettii
ENSKMAG00000016495	polr3f	100	50.388	ENSOARG00000008647	-	84	50.388	Ovis_aries
ENSKMAG00000016495	polr3f	100	81.091	ENSOARG00000000315	-	87	81.091	Ovis_aries
ENSKMAG00000016495	polr3f	100	81.818	ENSPPAG00000036681	POLR3F	87	81.818	Pan_paniscus
ENSKMAG00000016495	polr3f	100	81.455	ENSPPRG00000024604	POLR3F	87	81.455	Panthera_pardus
ENSKMAG00000016495	polr3f	100	81.455	ENSPTIG00000020292	POLR3F	87	81.455	Panthera_tigris_altaica
ENSKMAG00000016495	polr3f	100	81.818	ENSPTRG00000013287	POLR3F	87	81.818	Pan_troglodytes
ENSKMAG00000016495	polr3f	100	81.455	ENSPANG00000025015	POLR3F	87	81.455	Papio_anubis
ENSKMAG00000016495	polr3f	100	82.909	ENSPKIG00000004427	polr3f	88	82.909	Paramormyrops_kingsleyae
ENSKMAG00000016495	polr3f	100	82.909	ENSPSIG00000016613	POLR3F	100	82.909	Pelodiscus_sinensis
ENSKMAG00000016495	polr3f	100	51.504	ENSPMGG00000018350	polr3f	84	55.894	Periophthalmus_magnuspinnatus
ENSKMAG00000016495	polr3f	100	82.182	ENSPEMG00000006966	Polr3f	87	82.182	Peromyscus_maniculatus_bairdii
ENSKMAG00000016495	polr3f	100	74.909	ENSPMAG00000005530	polr3f	88	74.909	Petromyzon_marinus
ENSKMAG00000016495	polr3f	100	82.182	ENSPCIG00000000908	POLR3F	74	82.182	Phascolarctos_cinereus
ENSKMAG00000016495	polr3f	100	87.636	ENSPFOG00000018334	polr3f	87	87.636	Poecilia_formosa
ENSKMAG00000016495	polr3f	100	87.636	ENSPLAG00000021803	polr3f	87	87.636	Poecilia_latipinna
ENSKMAG00000016495	polr3f	100	87.636	ENSPMEG00000013150	polr3f	87	87.636	Poecilia_mexicana
ENSKMAG00000016495	polr3f	100	87.636	ENSPREG00000005278	polr3f	87	87.636	Poecilia_reticulata
ENSKMAG00000016495	polr3f	100	81.818	ENSPPYG00000010737	POLR3F	87	81.818	Pongo_abelii
ENSKMAG00000016495	polr3f	57	86.486	ENSPCAG00000004893	POLR3F	51	86.486	Procavia_capensis
ENSKMAG00000016495	polr3f	100	81.455	ENSPCOG00000004543	POLR3F	87	81.455	Propithecus_coquereli
ENSKMAG00000016495	polr3f	100	81.091	ENSPVAG00000000403	POLR3F	87	81.091	Pteropus_vampyrus
ENSKMAG00000016495	polr3f	100	88.364	ENSPNYG00000016276	polr3f	87	88.364	Pundamilia_nyererei
ENSKMAG00000016495	polr3f	100	85.455	ENSPNAG00000005164	polr3f	88	85.455	Pygocentrus_nattereri
ENSKMAG00000016495	polr3f	100	81.455	ENSRNOG00000007548	Polr3f	74	81.455	Rattus_norvegicus
ENSKMAG00000016495	polr3f	100	81.455	ENSRBIG00000021268	POLR3F	87	81.455	Rhinopithecus_bieti
ENSKMAG00000016495	polr3f	100	81.455	ENSRROG00000039911	POLR3F	87	81.455	Rhinopithecus_roxellana
ENSKMAG00000016495	polr3f	62	32.738	YNR003C	RPC34	52	32.738	Saccharomyces_cerevisiae
ENSKMAG00000016495	polr3f	100	82.182	ENSSBOG00000018207	POLR3F	87	82.182	Saimiri_boliviensis_boliviensis
ENSKMAG00000016495	polr3f	87	86.222	ENSSHAG00000018160	POLR3F	75	84.848	Sarcophilus_harrisii
ENSKMAG00000016495	polr3f	100	84.727	ENSSFOG00015022433	polr3f	88	84.727	Scleropages_formosus
ENSKMAG00000016495	polr3f	100	86.909	ENSSMAG00000021029	polr3f	87	86.909	Scophthalmus_maximus
ENSKMAG00000016495	polr3f	100	74.909	ENSSDUG00000022435	polr3f	86	76.000	Seriola_dumerili
ENSKMAG00000016495	polr3f	100	86.909	ENSSLDG00000012761	polr3f	87	88.000	Seriola_lalandi_dorsalis
ENSKMAG00000016495	polr3f	100	72.857	ENSSARG00000006039	POLR3F	87	72.857	Sorex_araneus
ENSKMAG00000016495	polr3f	100	82.182	ENSSPUG00000001873	POLR3F	88	82.182	Sphenodon_punctatus
ENSKMAG00000016495	polr3f	100	86.047	ENSSPAG00000002092	polr3f	86	86.047	Stegastes_partitus
ENSKMAG00000016495	polr3f	100	81.091	ENSSSCG00000007095	POLR3F	100	89.655	Sus_scrofa
ENSKMAG00000016495	polr3f	100	82.909	ENSTGUG00000005839	POLR3F	88	82.909	Taeniopygia_guttata
ENSKMAG00000016495	polr3f	100	85.455	ENSTRUG00000012101	polr3f	87	86.545	Takifugu_rubripes
ENSKMAG00000016495	polr3f	100	84.000	ENSTNIG00000006456	polr3f	87	85.091	Tetraodon_nigroviridis
ENSKMAG00000016495	polr3f	100	62.545	ENSTBEG00000007921	POLR3F	87	62.545	Tupaia_belangeri
ENSKMAG00000016495	polr3f	100	81.455	ENSTTRG00000002580	POLR3F	87	81.455	Tursiops_truncatus
ENSKMAG00000016495	polr3f	64	86.145	ENSUAMG00000024166	POLR3F	100	86.145	Ursus_americanus
ENSKMAG00000016495	polr3f	100	81.091	ENSUMAG00000024944	POLR3F	87	81.091	Ursus_maritimus
ENSKMAG00000016495	polr3f	100	81.818	ENSVPAG00000009063	POLR3F	87	81.818	Vicugna_pacos
ENSKMAG00000016495	polr3f	100	81.455	ENSVVUG00000012925	POLR3F	87	81.455	Vulpes_vulpes
ENSKMAG00000016495	polr3f	100	81.818	ENSXETG00000024898	polr3f	88	81.818	Xenopus_tropicalis
ENSKMAG00000016495	polr3f	100	87.636	ENSXCOG00000010301	polr3f	100	87.636	Xiphophorus_couchianus
ENSKMAG00000016495	polr3f	100	87.636	ENSXMAG00000004604	polr3f	87	87.636	Xiphophorus_maculatus