EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016514 (Gene tree)
Gene ID: 108243208
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4501 bases
Position: chrLWHD01000113.1:141319-145819
Accession: 108243208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022230	zf-U11-48K	PF05253.12	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022515	-	1416	XM_017428496	ENSKMAP00000022230	338 (aa)	XP_017283985	UPI0007F88AE9

Gene Model

Click here to download ENSKMAG00000016514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016514	snrnp48	80	46.619	ENSG00000168566	SNRNP48	90	44.300	Homo_sapiens
ENSKMAG00000016514	snrnp48	95	78.328	ENSAPOG00000021430	snrnp48	95	76.471	Acanthochromis_polyacanthus
ENSKMAG00000016514	snrnp48	73	47.451	ENSAMEG00000017349	SNRNP48	72	47.200	Ailuropoda_melanoleuca
ENSKMAG00000016514	snrnp48	93	72.871	ENSACIG00000002032	snrnp48	95	71.118	Amphilophus_citrinellus
ENSKMAG00000016514	snrnp48	95	77.090	ENSAOCG00000010562	snrnp48	95	75.851	Amphiprion_ocellaris
ENSKMAG00000016514	snrnp48	95	76.161	ENSAPEG00000003231	snrnp48	95	76.471	Amphiprion_percula
ENSKMAG00000016514	snrnp48	91	78.641	ENSATEG00000020210	snrnp48	92	79.153	Anabas_testudineus
ENSKMAG00000016514	snrnp48	80	48.797	ENSACAG00000002811	SNRNP48	87	47.500	Anolis_carolinensis
ENSKMAG00000016514	snrnp48	80	46.975	ENSANAG00000033538	SNRNP48	90	44.625	Aotus_nancymaae
ENSKMAG00000016514	snrnp48	91	58.147	ENSAMXG00000015309	snrnp48	94	57.321	Astyanax_mexicanus
ENSKMAG00000016514	snrnp48	91	40.785	ENSBTAG00000001123	SNRNP48	82	44.170	Bos_taurus
ENSKMAG00000016514	snrnp48	80	46.975	ENSCJAG00000021330	SNRNP48	92	44.089	Callithrix_jacchus
ENSKMAG00000016514	snrnp48	80	45.907	ENSCAFG00000009574	SNRNP48	75	43.648	Canis_familiaris
ENSKMAG00000016514	snrnp48	80	45.552	ENSCAFG00020013203	SNRNP48	90	43.322	Canis_lupus_dingo
ENSKMAG00000016514	snrnp48	91	41.867	ENSCHIG00000015216	SNRNP48	82	45.230	Capra_hircus
ENSKMAG00000016514	snrnp48	79	48.551	ENSTSYG00000000698	SNRNP48	81	48.551	Carlito_syrichta
ENSKMAG00000016514	snrnp48	86	43.137	ENSCAPG00000006768	SNRNP48	83	47.471	Cavia_aperea
ENSKMAG00000016514	snrnp48	94	42.353	ENSCPOG00000007910	SNRNP48	90	44.625	Cavia_porcellus
ENSKMAG00000016514	snrnp48	80	46.975	ENSCCAG00000035652	SNRNP48	90	44.625	Cebus_capucinus
ENSKMAG00000016514	snrnp48	80	46.263	ENSCATG00000033947	SNRNP48	90	43.974	Cercocebus_atys
ENSKMAG00000016514	snrnp48	80	46.263	ENSCLAG00000003765	SNRNP48	87	46.128	Chinchilla_lanigera
ENSKMAG00000016514	snrnp48	80	46.975	ENSCSAG00000007409	SNRNP48	90	44.625	Chlorocebus_sabaeus
ENSKMAG00000016514	snrnp48	82	45.000	ENSCPBG00000019146	SNRNP48	88	45.745	Chrysemys_picta_bellii
ENSKMAG00000016514	snrnp48	88	31.230	ENSCING00000004121	-	94	30.000	Ciona_intestinalis
ENSKMAG00000016514	snrnp48	80	46.975	ENSCANG00000030017	SNRNP48	90	44.625	Colobus_angolensis_palliatus
ENSKMAG00000016514	snrnp48	94	42.353	ENSCGRG00001001076	-	91	44.156	Cricetulus_griseus_chok1gshd
ENSKMAG00000016514	snrnp48	88	39.216	ENSCGRG00001008805	-	72	42.489	Cricetulus_griseus_chok1gshd
ENSKMAG00000016514	snrnp48	94	42.353	ENSCGRG00000007781	Snrnp48	91	44.156	Cricetulus_griseus_crigri
ENSKMAG00000016514	snrnp48	96	65.964	ENSCSEG00000000722	snrnp48	91	67.391	Cynoglossus_semilaevis
ENSKMAG00000016514	snrnp48	92	77.603	ENSCVAG00000019829	snrnp48	89	69.164	Cyprinodon_variegatus
ENSKMAG00000016514	snrnp48	93	52.439	ENSDARG00000039989	snrnp48	96	53.374	Danio_rerio
ENSKMAG00000016514	snrnp48	80	46.667	ENSDNOG00000014978	SNRNP48	90	44.373	Dasypus_novemcinctus
ENSKMAG00000016514	snrnp48	93	42.857	ENSDORG00000015140	Snrnp48	90	44.660	Dipodomys_ordii
ENSKMAG00000016514	snrnp48	79	47.826	ENSEASG00005012021	SNRNP48	85	47.603	Equus_asinus_asinus
ENSKMAG00000016514	snrnp48	80	46.263	ENSECAG00000026937	SNRNP48	87	46.128	Equus_caballus
ENSKMAG00000016514	snrnp48	88	60.703	ENSELUG00000009766	snrnp48	95	58.430	Esox_lucius
ENSKMAG00000016514	snrnp48	80	45.907	ENSFCAG00000018853	SNRNP48	90	43.648	Felis_catus
ENSKMAG00000016514	snrnp48	69	52.941	ENSFALG00000007797	SNRNP48	86	49.265	Ficedula_albicollis
ENSKMAG00000016514	snrnp48	80	45.552	ENSFDAG00000009231	SNRNP48	91	44.444	Fukomys_damarensis
ENSKMAG00000016514	snrnp48	66	84.071	ENSFHEG00000014647	snrnp48	95	79.853	Fundulus_heteroclitus
ENSKMAG00000016514	snrnp48	95	62.229	ENSGMOG00000018599	-	93	65.085	Gadus_morhua
ENSKMAG00000016514	snrnp48	76	50.190	ENSGALG00000013005	SNRNP48	67	56.436	Gallus_gallus
ENSKMAG00000016514	snrnp48	82	80.935	ENSGAFG00000021639	snrnp48	95	78.287	Gambusia_affinis
ENSKMAG00000016514	snrnp48	72	76.923	ENSGACG00000017756	-	97	69.753	Gasterosteus_aculeatus
ENSKMAG00000016514	snrnp48	83	44.702	ENSGAGG00000000865	SNRNP48	68	51.675	Gopherus_agassizii
ENSKMAG00000016514	snrnp48	80	46.975	ENSGGOG00000013220	SNRNP48	90	44.625	Gorilla_gorilla
ENSKMAG00000016514	snrnp48	93	78.233	ENSHBUG00000017066	snrnp48	94	77.950	Haplochromis_burtoni
ENSKMAG00000016514	snrnp48	80	45.196	ENSHGLG00000015241	SNRNP48	92	42.492	Heterocephalus_glaber_female
ENSKMAG00000016514	snrnp48	80	45.196	ENSHGLG00100010027	SNRNP48	92	42.492	Heterocephalus_glaber_male
ENSKMAG00000016514	snrnp48	74	73.123	ENSHCOG00000014066	snrnp48	94	66.361	Hippocampus_comes
ENSKMAG00000016514	snrnp48	80	46.619	ENSSTOG00000014635	SNRNP48	87	46.465	Ictidomys_tridecemlineatus
ENSKMAG00000016514	snrnp48	80	46.619	ENSJJAG00000011495	Snrnp48	92	43.770	Jaculus_jaculus
ENSKMAG00000016514	snrnp48	82	76.259	ENSLBEG00000026249	snrnp48	95	74.303	Labrus_bergylta
ENSKMAG00000016514	snrnp48	96	47.126	ENSLACG00000003958	SNRNP48	93	47.649	Latimeria_chalumnae
ENSKMAG00000016514	snrnp48	83	60.351	ENSLOCG00000004187	snrnp48	94	55.556	Lepisosteus_oculatus
ENSKMAG00000016514	snrnp48	80	45.390	ENSLAFG00000011152	SNRNP48	90	43.182	Loxodonta_africana
ENSKMAG00000016514	snrnp48	80	46.975	ENSMFAG00000045216	SNRNP48	90	44.625	Macaca_fascicularis
ENSKMAG00000016514	snrnp48	80	46.975	ENSMMUG00000014785	SNRNP48	90	44.625	Macaca_mulatta
ENSKMAG00000016514	snrnp48	80	46.975	ENSMNEG00000042269	SNRNP48	90	44.625	Macaca_nemestrina
ENSKMAG00000016514	snrnp48	80	46.975	ENSMLEG00000034004	SNRNP48	90	44.625	Mandrillus_leucophaeus
ENSKMAG00000016514	snrnp48	95	72.981	ENSMAMG00000018673	snrnp48	83	72.755	Mastacembelus_armatus
ENSKMAG00000016514	snrnp48	80	48.344	ENSMGAG00000006037	SNRNP48	67	56.931	Meleagris_gallopavo
ENSKMAG00000016514	snrnp48	94	42.353	ENSMAUG00000011944	Snrnp48	91	43.831	Mesocricetus_auratus
ENSKMAG00000016514	snrnp48	80	46.099	ENSMICG00000012497	SNRNP48	95	43.252	Microcebus_murinus
ENSKMAG00000016514	snrnp48	95	43.675	ENSMOCG00000015555	Snrnp48	96	42.945	Microtus_ochrogaster
ENSKMAG00000016514	snrnp48	56	82.292	ENSMMOG00000003072	-	61	82.292	Mola_mola
ENSKMAG00000016514	snrnp48	83	46.259	ENSMODG00000009996	SNRNP48	68	48.016	Monodelphis_domestica
ENSKMAG00000016514	snrnp48	95	74.613	ENSMALG00000005725	snrnp48	95	74.303	Monopterus_albus
ENSKMAG00000016514	snrnp48	94	42.353	MGP_CAROLIEiJ_G0018441	Snrnp48	91	44.805	Mus_caroli
ENSKMAG00000016514	snrnp48	94	42.353	ENSMUSG00000021431	Snrnp48	91	44.805	Mus_musculus
ENSKMAG00000016514	snrnp48	94	42.647	MGP_PahariEiJ_G0019509	Snrnp48	91	45.130	Mus_pahari
ENSKMAG00000016514	snrnp48	94	42.353	MGP_SPRETEiJ_G0019321	Snrnp48	91	44.805	Mus_spretus
ENSKMAG00000016514	snrnp48	94	44.118	ENSNGAG00000004849	Snrnp48	91	45.833	Nannospalax_galili
ENSKMAG00000016514	snrnp48	93	78.233	ENSNBRG00000012127	snrnp48	94	77.950	Neolamprologus_brichardi
ENSKMAG00000016514	snrnp48	80	46.975	ENSNLEG00000011667	SNRNP48	90	44.625	Nomascus_leucogenys
ENSKMAG00000016514	snrnp48	88	42.357	ENSOPRG00000015471	SNRNP48	91	44.218	Ochotona_princeps
ENSKMAG00000016514	snrnp48	93	78.233	ENSONIG00000001520	snrnp48	94	77.950	Oreochromis_niloticus
ENSKMAG00000016514	snrnp48	54	35.749	ENSOANG00000019888	-	99	35.749	Ornithorhynchus_anatinus
ENSKMAG00000016514	snrnp48	77	45.185	ENSOCUG00000005168	SNRNP48	92	45.196	Oryctolagus_cuniculus
ENSKMAG00000016514	snrnp48	88	77.441	ENSORLG00000015654	snrnp48	94	75.466	Oryzias_latipes
ENSKMAG00000016514	snrnp48	88	76.431	ENSORLG00020015976	snrnp48	80	74.845	Oryzias_latipes_hni
ENSKMAG00000016514	snrnp48	88	76.094	ENSORLG00015022379	snrnp48	80	74.534	Oryzias_latipes_hsok
ENSKMAG00000016514	snrnp48	85	76.655	ENSOMEG00000022007	snrnp48	94	74.534	Oryzias_melastigma
ENSKMAG00000016514	snrnp48	82	44.792	ENSOGAG00000005275	SNRNP48	91	44.079	Otolemur_garnettii
ENSKMAG00000016514	snrnp48	82	43.390	ENSOARG00000017319	SNRNP48	80	49.138	Ovis_aries
ENSKMAG00000016514	snrnp48	80	46.975	ENSPPAG00000032873	SNRNP48	90	44.625	Pan_paniscus
ENSKMAG00000016514	snrnp48	79	47.101	ENSPPRG00000004283	SNRNP48	88	44.702	Panthera_pardus
ENSKMAG00000016514	snrnp48	67	48.485	ENSPTIG00000013502	SNRNP48	89	45.525	Panthera_tigris_altaica
ENSKMAG00000016514	snrnp48	80	46.975	ENSPTRG00000017703	SNRNP48	90	44.625	Pan_troglodytes
ENSKMAG00000016514	snrnp48	80	46.975	ENSPANG00000000771	SNRNP48	90	44.625	Papio_anubis
ENSKMAG00000016514	snrnp48	82	62.766	ENSPKIG00000013703	snrnp48	52	66.122	Paramormyrops_kingsleyae
ENSKMAG00000016514	snrnp48	78	46.690	ENSPSIG00000002213	SNRNP48	66	52.607	Pelodiscus_sinensis
ENSKMAG00000016514	snrnp48	75	65.267	ENSPMGG00000008120	snrnp48	88	68.145	Periophthalmus_magnuspinnatus
ENSKMAG00000016514	snrnp48	94	43.235	ENSPEMG00000008872	Snrnp48	91	45.130	Peromyscus_maniculatus_bairdii
ENSKMAG00000016514	snrnp48	95	78.593	ENSPFOG00000003578	snrnp48	95	78.593	Poecilia_formosa
ENSKMAG00000016514	snrnp48	69	83.051	ENSPLAG00000002290	snrnp48	82	83.051	Poecilia_latipinna
ENSKMAG00000016514	snrnp48	95	78.593	ENSPMEG00000018033	snrnp48	95	78.593	Poecilia_mexicana
ENSKMAG00000016514	snrnp48	81	81.522	ENSPREG00000018541	snrnp48	95	77.064	Poecilia_reticulata
ENSKMAG00000016514	snrnp48	80	46.619	ENSPPYG00000016209	SNRNP48	90	44.300	Pongo_abelii
ENSKMAG00000016514	snrnp48	72	35.686	ENSPCAG00000011991	SNRNP48	93	36.653	Procavia_capensis
ENSKMAG00000016514	snrnp48	80	46.429	ENSPVAG00000002854	SNRNP48	90	44.118	Pteropus_vampyrus
ENSKMAG00000016514	snrnp48	92	77.885	ENSPNYG00000015399	snrnp48	100	77.564	Pundamilia_nyererei
ENSKMAG00000016514	snrnp48	94	43.988	ENSRNOG00000013756	Snrnp48	91	46.302	Rattus_norvegicus
ENSKMAG00000016514	snrnp48	80	46.975	ENSRBIG00000043856	SNRNP48	89	46.975	Rhinopithecus_bieti
ENSKMAG00000016514	snrnp48	80	46.975	ENSRROG00000043229	SNRNP48	90	44.625	Rhinopithecus_roxellana
ENSKMAG00000016514	snrnp48	80	47.331	ENSSBOG00000019486	SNRNP48	90	44.951	Saimiri_boliviensis_boliviensis
ENSKMAG00000016514	snrnp48	82	46.980	ENSSHAG00000014483	SNRNP48	93	44.308	Sarcophilus_harrisii
ENSKMAG00000016514	snrnp48	74	60.465	ENSSFOG00015006610	snrnp48	75	56.467	Scleropages_formosus
ENSKMAG00000016514	snrnp48	95	75.232	ENSSDUG00000014953	snrnp48	95	73.065	Seriola_dumerili
ENSKMAG00000016514	snrnp48	95	75.542	ENSSLDG00000005989	snrnp48	95	73.375	Seriola_lalandi_dorsalis
ENSKMAG00000016514	snrnp48	77	47.970	ENSSPUG00000006257	SNRNP48	59	53.365	Sphenodon_punctatus
ENSKMAG00000016514	snrnp48	95	79.938	ENSSPAG00000006454	snrnp48	95	78.947	Stegastes_partitus
ENSKMAG00000016514	snrnp48	77	48.763	ENSTGUG00000007575	SNRNP48	64	56.219	Taeniopygia_guttata
ENSKMAG00000016514	snrnp48	95	66.873	ENSTRUG00000007031	snrnp48	94	67.901	Takifugu_rubripes
ENSKMAG00000016514	snrnp48	97	65.663	ENSTNIG00000012977	-	92	65.944	Tetraodon_nigroviridis
ENSKMAG00000016514	snrnp48	73	47.656	ENSTBEG00000015620	SNRNP48	74	47.410	Tupaia_belangeri
ENSKMAG00000016514	snrnp48	91	42.727	ENSTTRG00000016715	SNRNP48	92	43.631	Tursiops_truncatus
ENSKMAG00000016514	snrnp48	80	45.714	ENSUAMG00000003690	SNRNP48	90	43.464	Ursus_americanus
ENSKMAG00000016514	snrnp48	71	47.308	ENSVPAG00000003557	SNRNP48	89	46.124	Vicugna_pacos
ENSKMAG00000016514	snrnp48	83	44.828	ENSVVUG00000004996	SNRNP48	89	43.464	Vulpes_vulpes
ENSKMAG00000016514	snrnp48	84	46.154	ENSXETG00000020447	snrnp48	85	46.154	Xenopus_tropicalis
ENSKMAG00000016514	snrnp48	70	81.857	ENSXCOG00000004478	snrnp48	95	70.732	Xiphophorus_couchianus
ENSKMAG00000016514	snrnp48	95	77.676	ENSXMAG00000013595	snrnp48	95	77.676	Xiphophorus_maculatus