EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016610 (Gene tree)
Gene ID: 108250791
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: RNA polymerase II-associated protein 3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 16872 bases
Position: chrLWHD01000695.1:12278-29149
Accession: 108250791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022382	RRM_1	PF00076.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022667	-	4173	XM_025002725	ENSKMAP00000022382	642 (aa)	XP_024858493	UPI000D52F4D9

Gene Model

Click here to download ENSKMAG00000016610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016610	si:dkey-33c12.4	50	41.284	ENSKMAG00000006468	-	53	41.358
ENSKMAG00000016610	si:dkey-33c12.4	55	32.337	ENSKMAG00000021350	zgc:123010	63	31.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016610	si:dkey-33c12.4	55	32.609	ENSAPOG00000019633	zgc:123010	62	31.937	Acanthochromis_polyacanthus
ENSKMAG00000016610	si:dkey-33c12.4	52	40.805	ENSAPOG00000022403	-	52	40.882	Acanthochromis_polyacanthus
ENSKMAG00000016610	si:dkey-33c12.4	100	61.905	ENSAPOG00000005058	si:dkey-33c12.4	100	60.714	Acanthochromis_polyacanthus
ENSKMAG00000016610	si:dkey-33c12.4	54	30.966	ENSACIG00000021684	zgc:123010	80	30.108	Amphilophus_citrinellus
ENSKMAG00000016610	si:dkey-33c12.4	55	32.609	ENSAOCG00000005910	zgc:123010	62	31.937	Amphiprion_ocellaris
ENSKMAG00000016610	si:dkey-33c12.4	98	62.367	ENSAOCG00000020066	si:dkey-33c12.4	98	61.912	Amphiprion_ocellaris
ENSKMAG00000016610	si:dkey-33c12.4	52	40.805	ENSAOCG00000000431	-	79	35.019	Amphiprion_ocellaris
ENSKMAG00000016610	si:dkey-33c12.4	52	40.341	ENSAPEG00000023603	-	79	34.572	Amphiprion_percula
ENSKMAG00000016610	si:dkey-33c12.4	55	32.609	ENSAPEG00000014305	zgc:123010	66	31.937	Amphiprion_percula
ENSKMAG00000016610	si:dkey-33c12.4	51	40.517	ENSATEG00000018302	-	57	38.781	Anabas_testudineus
ENSKMAG00000016610	si:dkey-33c12.4	99	58.716	ENSATEG00000018885	si:dkey-33c12.4	99	58.447	Anabas_testudineus
ENSKMAG00000016610	si:dkey-33c12.4	55	31.793	ENSATEG00000001220	zgc:123010	59	30.108	Anabas_testudineus
ENSKMAG00000016610	si:dkey-33c12.4	99	61.364	ENSACLG00000014192	si:dkey-33c12.4	99	59.219	Astatotilapia_calliptera
ENSKMAG00000016610	si:dkey-33c12.4	52	40.000	ENSACLG00000003019	-	54	41.641	Astatotilapia_calliptera
ENSKMAG00000016610	si:dkey-33c12.4	55	32.877	ENSACLG00000010188	zgc:123010	64	32.454	Astatotilapia_calliptera
ENSKMAG00000016610	si:dkey-33c12.4	96	37.615	ENSAMXG00000010871	si:dkey-33c12.4	98	37.500	Astyanax_mexicanus
ENSKMAG00000016610	si:dkey-33c12.4	54	31.250	ENSAMXG00000041967	zgc:123010	53	44.595	Astyanax_mexicanus
ENSKMAG00000016610	si:dkey-33c12.4	83	31.273	ENSCPBG00000024454	-	50	35.593	Chrysemys_picta_bellii
ENSKMAG00000016610	si:dkey-33c12.4	74	33.396	ENSCSEG00000002755	-	89	32.784	Cynoglossus_semilaevis
ENSKMAG00000016610	si:dkey-33c12.4	100	59.754	ENSCVAG00000006564	-	100	60.308	Cyprinodon_variegatus
ENSKMAG00000016610	si:dkey-33c12.4	57	32.718	ENSCVAG00000013288	zgc:123010	63	31.926	Cyprinodon_variegatus
ENSKMAG00000016610	si:dkey-33c12.4	60	37.745	ENSCVAG00000004187	-	74	36.147	Cyprinodon_variegatus
ENSKMAG00000016610	si:dkey-33c12.4	54	30.056	ENSDARG00000039082	zgc:123010	61	31.373	Danio_rerio
ENSKMAG00000016610	si:dkey-33c12.4	98	35.988	ENSDARG00000057890	si:dkey-33c12.4	99	36.141	Danio_rerio
ENSKMAG00000016610	si:dkey-33c12.4	56	33.243	ENSELUG00000022008	zgc:123010	74	43.258	Esox_lucius
ENSKMAG00000016610	si:dkey-33c12.4	95	39.183	ENSELUG00000002009	si:dkey-33c12.4	97	38.880	Esox_lucius
ENSKMAG00000016610	si:dkey-33c12.4	81	35.874	ENSELUG00000001633	-	55	39.889	Esox_lucius
ENSKMAG00000016610	si:dkey-33c12.4	100	63.102	ENSFHEG00000005521	si:dkey-33c12.4	100	64.458	Fundulus_heteroclitus
ENSKMAG00000016610	si:dkey-33c12.4	57	32.031	ENSFHEG00000002306	zgc:123010	62	32.031	Fundulus_heteroclitus
ENSKMAG00000016610	si:dkey-33c12.4	57	31.135	ENSGMOG00000018473	zgc:123010	86	31.398	Gadus_morhua
ENSKMAG00000016610	si:dkey-33c12.4	66	33.621	ENSGAFG00000009373	zgc:123010	56	42.949	Gambusia_affinis
ENSKMAG00000016610	si:dkey-33c12.4	99	61.203	ENSGAFG00000017596	si:dkey-33c12.4	100	62.293	Gambusia_affinis
ENSKMAG00000016610	si:dkey-33c12.4	57	61.580	ENSGACG00000004936	-	97	60.763	Gasterosteus_aculeatus
ENSKMAG00000016610	si:dkey-33c12.4	99	61.295	ENSHBUG00000010735	si:dkey-33c12.4	99	60.693	Haplochromis_burtoni
ENSKMAG00000016610	si:dkey-33c12.4	96	39.357	ENSIPUG00000005998	si:dkey-33c12.4	99	38.615	Ictalurus_punctatus
ENSKMAG00000016610	si:dkey-33c12.4	90	54.742	ENSLBEG00000017203	-	99	56.167	Labrus_bergylta
ENSKMAG00000016610	si:dkey-33c12.4	54	39.678	ENSLBEG00000028046	-	56	38.667	Labrus_bergylta
ENSKMAG00000016610	si:dkey-33c12.4	54	31.129	ENSLBEG00000023984	zgc:123010	59	31.768	Labrus_bergylta
ENSKMAG00000016610	si:dkey-33c12.4	99	55.115	ENSLBEG00000021088	-	99	56.375	Labrus_bergylta
ENSKMAG00000016610	si:dkey-33c12.4	53	36.311	ENSLACG00000004602	-	60	35.977	Latimeria_chalumnae
ENSKMAG00000016610	si:dkey-33c12.4	86	38.305	ENSLOCG00000001861	-	92	35.591	Lepisosteus_oculatus
ENSKMAG00000016610	si:dkey-33c12.4	78	32.563	ENSMAMG00000004311	-	75	35.463	Mastacembelus_armatus
ENSKMAG00000016610	si:dkey-33c12.4	53	30.791	ENSMAMG00000001145	zgc:123010	71	31.161	Mastacembelus_armatus
ENSKMAG00000016610	si:dkey-33c12.4	51	34.951	ENSMAMG00000003394	-	80	40.373	Mastacembelus_armatus
ENSKMAG00000016610	si:dkey-33c12.4	99	60.215	ENSMAMG00000000111	si:dkey-33c12.4	99	60.215	Mastacembelus_armatus
ENSKMAG00000016610	si:dkey-33c12.4	55	30.563	ENSMZEG00005014740	-	72	41.216	Maylandia_zebra
ENSKMAG00000016610	si:dkey-33c12.4	55	32.877	ENSMZEG00005027733	zgc:123010	64	32.454	Maylandia_zebra
ENSKMAG00000016610	si:dkey-33c12.4	99	60.752	ENSMZEG00005014276	si:dkey-33c12.4	99	60.332	Maylandia_zebra
ENSKMAG00000016610	si:dkey-33c12.4	54	39.785	ENSMZEG00005000585	-	54	41.641	Maylandia_zebra
ENSKMAG00000016610	si:dkey-33c12.4	51	30.000	ENSMMOG00000017955	-	70	30.000	Mola_mola
ENSKMAG00000016610	si:dkey-33c12.4	55	32.329	ENSMALG00000017698	zgc:123010	62	31.926	Monopterus_albus
ENSKMAG00000016610	si:dkey-33c12.4	55	39.674	ENSMALG00000003167	-	51	42.342	Monopterus_albus
ENSKMAG00000016610	si:dkey-33c12.4	99	58.951	ENSMALG00000002265	si:dkey-33c12.4	99	58.833	Monopterus_albus
ENSKMAG00000016610	si:dkey-33c12.4	53	30.857	ENSNBRG00000021157	zgc:123010	65	46.923	Neolamprologus_brichardi
ENSKMAG00000016610	si:dkey-33c12.4	56	61.644	ENSONIG00000012263	-	99	60.916	Oreochromis_niloticus
ENSKMAG00000016610	si:dkey-33c12.4	55	30.959	ENSONIG00000018353	zgc:123010	66	30.607	Oreochromis_niloticus
ENSKMAG00000016610	si:dkey-33c12.4	52	39.377	ENSONIG00000007538	-	98	48.148	Oreochromis_niloticus
ENSKMAG00000016610	si:dkey-33c12.4	79	34.100	ENSORLG00000030385	-	52	40.673	Oryzias_latipes
ENSKMAG00000016610	si:dkey-33c12.4	98	53.616	ENSORLG00000029651	si:dkey-33c12.4	99	52.786	Oryzias_latipes
ENSKMAG00000016610	si:dkey-33c12.4	96	54.194	ENSORLG00020008750	si:dkey-33c12.4	99	50.742	Oryzias_latipes_hni
ENSKMAG00000016610	si:dkey-33c12.4	52	40.580	ENSORLG00015008400	-	53	41.194	Oryzias_latipes_hsok
ENSKMAG00000016610	si:dkey-33c12.4	57	32.283	ENSORLG00015008373	zgc:123010	63	32.021	Oryzias_latipes_hsok
ENSKMAG00000016610	si:dkey-33c12.4	98	53.030	ENSOMEG00000008913	-	98	53.253	Oryzias_melastigma
ENSKMAG00000016610	si:dkey-33c12.4	89	36.349	ENSPKIG00000011819	-	78	37.705	Paramormyrops_kingsleyae
ENSKMAG00000016610	si:dkey-33c12.4	56	32.240	ENSPKIG00000015521	zgc:123010	68	31.967	Paramormyrops_kingsleyae
ENSKMAG00000016610	si:dkey-33c12.4	52	31.065	ENSPMAG00000004544	zgc:123010	99	31.953	Petromyzon_marinus
ENSKMAG00000016610	si:dkey-33c12.4	99	61.743	ENSPFOG00000009143	si:dkey-33c12.4	100	62.275	Poecilia_formosa
ENSKMAG00000016610	si:dkey-33c12.4	96	62.422	ENSPLAG00000022537	si:dkey-33c12.4	100	62.267	Poecilia_latipinna
ENSKMAG00000016610	si:dkey-33c12.4	99	61.300	ENSPMEG00000015590	si:dkey-33c12.4	100	61.826	Poecilia_mexicana
ENSKMAG00000016610	si:dkey-33c12.4	99	60.902	ENSPNYG00000018262	si:dkey-33c12.4	99	60.483	Pundamilia_nyererei
ENSKMAG00000016610	si:dkey-33c12.4	55	33.151	ENSPNYG00000007893	zgc:123010	63	32.718	Pundamilia_nyererei
ENSKMAG00000016610	si:dkey-33c12.4	54	39.305	ENSPNYG00000001047	-	54	41.641	Pundamilia_nyererei
ENSKMAG00000016610	si:dkey-33c12.4	98	35.832	ENSPNAG00000018386	si:dkey-33c12.4	99	34.783	Pygocentrus_nattereri
ENSKMAG00000016610	si:dkey-33c12.4	62	41.990	ENSSFOG00015009199	-	58	42.559	Scleropages_formosus
ENSKMAG00000016610	si:dkey-33c12.4	58	42.440	ENSSFOG00015005186	-	95	36.699	Scleropages_formosus
ENSKMAG00000016610	si:dkey-33c12.4	57	30.871	ENSSFOG00015021394	zgc:123010	67	30.871	Scleropages_formosus
ENSKMAG00000016610	si:dkey-33c12.4	99	59.940	ENSSMAG00000008147	si:dkey-33c12.4	99	59.880	Scophthalmus_maximus
ENSKMAG00000016610	si:dkey-33c12.4	54	32.692	ENSSMAG00000002904	zgc:123010	64	32.337	Scophthalmus_maximus
ENSKMAG00000016610	si:dkey-33c12.4	70	35.343	ENSSMAG00000010960	-	53	40.120	Scophthalmus_maximus
ENSKMAG00000016610	si:dkey-33c12.4	99	61.796	ENSSDUG00000003213	si:dkey-33c12.4	99	61.774	Seriola_dumerili
ENSKMAG00000016610	si:dkey-33c12.4	54	31.492	ENSSDUG00000008651	zgc:123010	58	31.768	Seriola_dumerili
ENSKMAG00000016610	si:dkey-33c12.4	54	41.061	ENSSDUG00000010976	-	52	43.653	Seriola_dumerili
ENSKMAG00000016610	si:dkey-33c12.4	54	31.492	ENSSLDG00000019386	zgc:123010	58	31.768	Seriola_lalandi_dorsalis
ENSKMAG00000016610	si:dkey-33c12.4	99	62.614	ENSSLDG00000009448	si:dkey-33c12.4	99	62.385	Seriola_lalandi_dorsalis
ENSKMAG00000016610	si:dkey-33c12.4	54	41.598	ENSSLDG00000012846	-	54	43.252	Seriola_lalandi_dorsalis
ENSKMAG00000016610	si:dkey-33c12.4	57	32.723	ENSSPAG00000013621	zgc:123010	62	32.461	Stegastes_partitus
ENSKMAG00000016610	si:dkey-33c12.4	100	64.137	ENSSPAG00000022577	-	100	64.286	Stegastes_partitus
ENSKMAG00000016610	si:dkey-33c12.4	58	36.598	ENSTRUG00000000057	-	59	36.658	Takifugu_rubripes
ENSKMAG00000016610	si:dkey-33c12.4	99	44.168	ENSTRUG00000022374	si:dkey-33c12.4	90	46.202	Takifugu_rubripes
ENSKMAG00000016610	si:dkey-33c12.4	53	31.429	ENSTNIG00000001303	zgc:123010	83	41.912	Tetraodon_nigroviridis
ENSKMAG00000016610	si:dkey-33c12.4	54	55.143	ENSTNIG00000010542	-	93	51.130	Tetraodon_nigroviridis
ENSKMAG00000016610	si:dkey-33c12.4	53	31.195	ENSXETG00000033896	-	99	31.195	Xenopus_tropicalis
ENSKMAG00000016610	si:dkey-33c12.4	53	33.521	ENSXCOG00000012281	zgc:123010	71	33.803	Xiphophorus_couchianus
ENSKMAG00000016610	si:dkey-33c12.4	99	61.689	ENSXMAG00000018535	si:dkey-33c12.4	100	62.935	Xiphophorus_maculatus