EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016611 (Gene tree)
Gene ID: 108245372
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8380 bases
Position: chrLWHD01000172.1:455867-464246
Accession: 108245372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022441	ResIII	PF04851.15	3.4e-07	1	1
ENSKMAP00000022403	ResIII	PF04851.15	3.9e-07	1	1
ENSKMAP00000022441	DEAD	PF00270.29	1e-38	1	1
ENSKMAP00000022403	DEAD	PF00270.29	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022726	-	1569	-	ENSKMAP00000022441	522 (aa)	-	-
ENSKMAT00000022688	-	2001	XM_017432241	ENSKMAP00000022403	561 (aa)	XP_017287730	UPI0007F865F5

Gene Model

Click here to download ENSKMAG00000016611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016611	ddx56	83	31.019	ENSKMAG00000013071	ddx47	78	31.336
ENSKMAG00000016611	ddx56	80	31.116	ENSKMAG00000014889	ddx27	51	31.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016611	ddx56	98	64.973	ENSG00000136271	DDX56	97	68.156	Homo_sapiens
ENSKMAG00000016611	ddx56	99	85.536	ENSAPOG00000017113	ddx56	99	85.893	Acanthochromis_polyacanthus
ENSKMAG00000016611	ddx56	98	63.291	ENSAMEG00000017711	DDX56	98	63.291	Ailuropoda_melanoleuca
ENSKMAG00000016611	ddx56	96	73.000	ENSACIG00000013747	ddx56	99	84.615	Amphilophus_citrinellus
ENSKMAG00000016611	ddx56	96	87.674	ENSAOCG00000018059	ddx56	94	87.849	Amphiprion_ocellaris
ENSKMAG00000016611	ddx56	93	87.526	ENSAOCG00000015447	-	87	87.730	Amphiprion_ocellaris
ENSKMAG00000016611	ddx56	99	85.305	ENSAPEG00000007267	ddx56	99	84.946	Amphiprion_percula
ENSKMAG00000016611	ddx56	99	84.436	ENSATEG00000005279	ddx56	99	83.900	Anabas_testudineus
ENSKMAG00000016611	ddx56	99	81.786	ENSACLG00000020113	ddx56	99	81.607	Astatotilapia_calliptera
ENSKMAG00000016611	ddx56	99	75.763	ENSAMXG00000019357	ddx56	99	76.122	Astyanax_mexicanus
ENSKMAG00000016611	ddx56	99	64.222	ENSBTAG00000010602	DDX56	99	64.222	Bos_taurus
ENSKMAG00000016611	ddx56	97	41.040	WBGene00016073	C24H12.4	86	41.261	Caenorhabditis_elegans
ENSKMAG00000016611	ddx56	98	64.324	ENSCJAG00000012233	DDX56	98	62.877	Callithrix_jacchus
ENSKMAG00000016611	ddx56	82	61.220	ENSCAFG00000029295	DDX56	99	61.656	Canis_familiaris
ENSKMAG00000016611	ddx56	98	63.465	ENSCAFG00020019695	DDX56	98	63.364	Canis_lupus_dingo
ENSKMAG00000016611	ddx56	99	64.758	ENSCHIG00000014261	DDX56	99	64.222	Capra_hircus
ENSKMAG00000016611	ddx56	98	64.065	ENSTSYG00000008048	DDX56	97	63.148	Carlito_syrichta
ENSKMAG00000016611	ddx56	85	65.843	ENSCAPG00000006286	DDX56	99	62.190	Cavia_aperea
ENSKMAG00000016611	ddx56	99	64.758	ENSCPOG00000003359	DDX56	99	64.065	Cavia_porcellus
ENSKMAG00000016611	ddx56	98	63.784	ENSCCAG00000025303	DDX56	98	63.964	Cebus_capucinus
ENSKMAG00000016611	ddx56	98	64.791	ENSCATG00000039389	DDX56	97	63.327	Cercocebus_atys
ENSKMAG00000016611	ddx56	99	63.506	ENSCLAG00000007666	DDX56	99	63.273	Chinchilla_lanigera
ENSKMAG00000016611	ddx56	98	64.791	ENSCSAG00000015636	DDX56	97	63.327	Chlorocebus_sabaeus
ENSKMAG00000016611	ddx56	98	68.966	ENSCPBG00000024556	DDX56	97	68.784	Chrysemys_picta_bellii
ENSKMAG00000016611	ddx56	95	60.040	ENSCING00000005185	-	98	59.883	Ciona_intestinalis
ENSKMAG00000016611	ddx56	95	60.359	ENSCSAVG00000011266	-	98	60.159	Ciona_savignyi
ENSKMAG00000016611	ddx56	98	64.791	ENSCANG00000028187	DDX56	97	63.327	Colobus_angolensis_palliatus
ENSKMAG00000016611	ddx56	98	66.019	ENSCGRG00001019019	Ddx56	98	64.195	Cricetulus_griseus_chok1gshd
ENSKMAG00000016611	ddx56	98	66.019	ENSCGRG00000011870	Ddx56	98	64.195	Cricetulus_griseus_crigri
ENSKMAG00000016611	ddx56	99	81.753	ENSCSEG00000008368	ddx56	99	81.574	Cynoglossus_semilaevis
ENSKMAG00000016611	ddx56	99	86.964	ENSCVAG00000006499	ddx56	99	86.786	Cyprinodon_variegatus
ENSKMAG00000016611	ddx56	99	78.315	ENSDARG00000020913	ddx56	99	78.315	Danio_rerio
ENSKMAG00000016611	ddx56	86	62.241	ENSDNOG00000036526	DDX56	97	61.618	Dasypus_novemcinctus
ENSKMAG00000016611	ddx56	99	51.619	FBgn0001565	Hlc	92	51.619	Drosophila_melanogaster
ENSKMAG00000016611	ddx56	69	75.000	ENSETEG00000002969	-	74	58.072	Echinops_telfairi
ENSKMAG00000016611	ddx56	92	44.191	ENSETEG00000019559	-	99	43.568	Echinops_telfairi
ENSKMAG00000016611	ddx56	98	66.667	ENSEBUG00000009986	ddx56	99	66.667	Eptatretus_burgeri
ENSKMAG00000016611	ddx56	96	65.748	ENSEASG00005017795	DDX56	98	62.210	Equus_asinus_asinus
ENSKMAG00000016611	ddx56	96	65.551	ENSECAG00000019897	DDX56	98	62.032	Equus_caballus
ENSKMAG00000016611	ddx56	84	64.786	ENSEEUG00000004849	DDX56	97	62.292	Erinaceus_europaeus
ENSKMAG00000016611	ddx56	99	79.249	ENSELUG00000004150	ddx56	99	79.249	Esox_lucius
ENSKMAG00000016611	ddx56	98	63.110	ENSFCAG00000010261	DDX56	98	62.210	Felis_catus
ENSKMAG00000016611	ddx56	98	66.473	ENSFDAG00000007128	DDX56	99	63.148	Fukomys_damarensis
ENSKMAG00000016611	ddx56	96	86.706	ENSFHEG00000018008	ddx56	97	87.476	Fundulus_heteroclitus
ENSKMAG00000016611	ddx56	99	82.309	ENSGAFG00000006906	ddx56	99	81.937	Gambusia_affinis
ENSKMAG00000016611	ddx56	94	72.691	ENSGAGG00000006789	DDX56	90	71.512	Gopherus_agassizii
ENSKMAG00000016611	ddx56	98	64.973	ENSGGOG00000012031	DDX56	97	63.506	Gorilla_gorilla
ENSKMAG00000016611	ddx56	97	78.389	ENSHBUG00000015246	ddx56	97	76.611	Haplochromis_burtoni
ENSKMAG00000016611	ddx56	98	66.279	ENSHGLG00000017271	DDX56	99	62.970	Heterocephalus_glaber_female
ENSKMAG00000016611	ddx56	98	66.279	ENSHGLG00100015731	DDX56	99	62.970	Heterocephalus_glaber_male
ENSKMAG00000016611	ddx56	100	78.901	ENSHCOG00000001685	ddx56	100	78.901	Hippocampus_comes
ENSKMAG00000016611	ddx56	99	75.577	ENSIPUG00000006602	ddx56	97	74.101	Ictalurus_punctatus
ENSKMAG00000016611	ddx56	98	64.195	ENSSTOG00000000464	DDX56	98	63.653	Ictidomys_tridecemlineatus
ENSKMAG00000016611	ddx56	98	64.919	ENSJJAG00000014269	Ddx56	99	64.557	Jaculus_jaculus
ENSKMAG00000016611	ddx56	99	83.244	ENSLBEG00000026281	ddx56	100	82.709	Labrus_bergylta
ENSKMAG00000016611	ddx56	99	70.886	ENSLACG00000015551	DDX56	97	71.942	Latimeria_chalumnae
ENSKMAG00000016611	ddx56	99	77.518	ENSLOCG00000015185	ddx56	98	77.518	Lepisosteus_oculatus
ENSKMAG00000016611	ddx56	99	64.591	ENSLAFG00000018206	DDX56	99	64.057	Loxodonta_africana
ENSKMAG00000016611	ddx56	98	64.610	ENSMFAG00000041001	DDX56	97	63.148	Macaca_fascicularis
ENSKMAG00000016611	ddx56	98	64.610	ENSMMUG00000002645	DDX56	97	63.148	Macaca_mulatta
ENSKMAG00000016611	ddx56	98	64.610	ENSMNEG00000028492	DDX56	97	63.148	Macaca_nemestrina
ENSKMAG00000016611	ddx56	98	64.973	ENSMLEG00000043591	DDX56	97	63.506	Mandrillus_leucophaeus
ENSKMAG00000016611	ddx56	100	81.915	ENSMAMG00000007776	ddx56	100	81.560	Mastacembelus_armatus
ENSKMAG00000016611	ddx56	99	81.786	ENSMZEG00005009813	ddx56	99	81.607	Maylandia_zebra
ENSKMAG00000016611	ddx56	98	64.865	ENSMICG00000005550	DDX56	98	63.410	Microcebus_murinus
ENSKMAG00000016611	ddx56	98	63.834	ENSMOCG00000016782	Ddx56	98	63.472	Microtus_ochrogaster
ENSKMAG00000016611	ddx56	99	84.571	ENSMMOG00000009654	ddx56	99	84.571	Mola_mola
ENSKMAG00000016611	ddx56	98	59.206	ENSMODG00000016137	DDX56	97	58.664	Monodelphis_domestica
ENSKMAG00000016611	ddx56	73	75.584	ENSMALG00000016910	ddx56	99	75.584	Monopterus_albus
ENSKMAG00000016611	ddx56	98	63.784	MGP_CAROLIEiJ_G0016069	Ddx56	97	67.480	Mus_caroli
ENSKMAG00000016611	ddx56	98	63.423	ENSMUSG00000004393	Ddx56	97	67.886	Mus_musculus
ENSKMAG00000016611	ddx56	98	64.376	MGP_PahariEiJ_G0016822	Ddx56	97	67.480	Mus_pahari
ENSKMAG00000016611	ddx56	98	63.423	MGP_SPRETEiJ_G0016911	Ddx56	97	67.886	Mus_spretus
ENSKMAG00000016611	ddx56	98	64.854	ENSMPUG00000018196	DDX56	85	63.803	Mustela_putorius_furo
ENSKMAG00000016611	ddx56	98	62.387	ENSMLUG00000003509	DDX56	98	61.854	Myotis_lucifugus
ENSKMAG00000016611	ddx56	99	64.401	ENSNGAG00000018785	Ddx56	99	63.864	Nannospalax_galili
ENSKMAG00000016611	ddx56	97	77.996	ENSNBRG00000002656	ddx56	98	76.460	Neolamprologus_brichardi
ENSKMAG00000016611	ddx56	98	64.973	ENSNLEG00000003816	DDX56	97	63.506	Nomascus_leucogenys
ENSKMAG00000016611	ddx56	95	61.000	ENSMEUG00000006788	DDX56	99	60.600	Notamacropus_eugenii
ENSKMAG00000016611	ddx56	98	62.568	ENSOPRG00000000292	-	98	61.691	Ochotona_princeps
ENSKMAG00000016611	ddx56	72	66.755	ENSODEG00000014807	DDX56	98	66.227	Octodon_degus
ENSKMAG00000016611	ddx56	99	79.428	ENSONIG00000011509	ddx56	99	78.891	Oreochromis_niloticus
ENSKMAG00000016611	ddx56	96	55.576	ENSOANG00000006320	-	99	55.393	Ornithorhynchus_anatinus
ENSKMAG00000016611	ddx56	78	56.098	ENSOANG00000015987	-	94	56.098	Ornithorhynchus_anatinus
ENSKMAG00000016611	ddx56	53	64.158	ENSOANG00000010592	-	99	63.799	Ornithorhynchus_anatinus
ENSKMAG00000016611	ddx56	98	64.195	ENSOCUG00000022918	DDX56	98	64.324	Oryctolagus_cuniculus
ENSKMAG00000016611	ddx56	99	84.107	ENSORLG00000001434	ddx56	99	83.929	Oryzias_latipes
ENSKMAG00000016611	ddx56	99	83.750	ENSORLG00020015718	ddx56	96	83.571	Oryzias_latipes_hni
ENSKMAG00000016611	ddx56	99	84.107	ENSORLG00015003004	ddx56	95	83.929	Oryzias_latipes_hsok
ENSKMAG00000016611	ddx56	99	83.929	ENSOMEG00000022072	ddx56	99	83.929	Oryzias_melastigma
ENSKMAG00000016611	ddx56	98	63.964	ENSOGAG00000009981	DDX56	98	63.604	Otolemur_garnettii
ENSKMAG00000016611	ddx56	99	64.937	ENSOARG00000015240	DDX56	99	64.758	Ovis_aries
ENSKMAG00000016611	ddx56	96	53.309	ENSPPAG00000031263	-	96	53.309	Pan_paniscus
ENSKMAG00000016611	ddx56	98	62.321	ENSPPAG00000029147	DDX56	97	60.915	Pan_paniscus
ENSKMAG00000016611	ddx56	98	62.568	ENSPPRG00000014594	DDX56	98	62.389	Panthera_pardus
ENSKMAG00000016611	ddx56	96	55.576	ENSPTIG00000019500	DDX56	98	55.948	Panthera_tigris_altaica
ENSKMAG00000016611	ddx56	93	53.753	ENSPTRG00000052765	-	99	53.558	Pan_troglodytes
ENSKMAG00000016611	ddx56	98	64.973	ENSPTRG00000019147	DDX56	97	63.506	Pan_troglodytes
ENSKMAG00000016611	ddx56	98	64.610	ENSPANG00000002446	DDX56	97	63.148	Papio_anubis
ENSKMAG00000016611	ddx56	99	78.998	ENSPKIG00000018998	ddx56	99	75.850	Paramormyrops_kingsleyae
ENSKMAG00000016611	ddx56	99	81.071	ENSPMGG00000017421	ddx56	99	81.308	Periophthalmus_magnuspinnatus
ENSKMAG00000016611	ddx56	99	65.295	ENSPCIG00000009336	DDX56	98	65.295	Phascolarctos_cinereus
ENSKMAG00000016611	ddx56	99	86.856	ENSPFOG00000018658	ddx56	100	87.389	Poecilia_formosa
ENSKMAG00000016611	ddx56	99	87.034	ENSPLAG00000019208	ddx56	100	87.567	Poecilia_latipinna
ENSKMAG00000016611	ddx56	99	86.856	ENSPMEG00000001775	ddx56	100	87.389	Poecilia_mexicana
ENSKMAG00000016611	ddx56	99	87.034	ENSPREG00000015142	ddx56	100	87.034	Poecilia_reticulata
ENSKMAG00000016611	ddx56	98	64.973	ENSPPYG00000017591	DDX56	97	63.506	Pongo_abelii
ENSKMAG00000016611	ddx56	96	64.457	ENSPCAG00000011499	DDX56	99	63.904	Procavia_capensis
ENSKMAG00000016611	ddx56	98	64.685	ENSPCOG00000024864	DDX56	98	63.233	Propithecus_coquereli
ENSKMAG00000016611	ddx56	87	68.900	ENSPVAG00000000791	DDX56	86	68.900	Pteropus_vampyrus
ENSKMAG00000016611	ddx56	99	81.607	ENSPNYG00000019212	ddx56	99	81.429	Pundamilia_nyererei
ENSKMAG00000016611	ddx56	99	78.695	ENSPNAG00000025446	ddx56	99	77.158	Pygocentrus_nattereri
ENSKMAG00000016611	ddx56	98	64.557	ENSRNOG00000004670	Ddx56	98	64.014	Rattus_norvegicus
ENSKMAG00000016611	ddx56	98	64.791	ENSRBIG00000030140	DDX56	97	63.327	Rhinopithecus_bieti
ENSKMAG00000016611	ddx56	98	64.610	ENSRROG00000044428	DDX56	97	63.148	Rhinopithecus_roxellana
ENSKMAG00000016611	ddx56	96	44.007	YLR276C	-	97	45.189	Saccharomyces_cerevisiae
ENSKMAG00000016611	ddx56	98	64.195	ENSSBOG00000034339	DDX56	98	62.745	Saimiri_boliviensis_boliviensis
ENSKMAG00000016611	ddx56	86	64.403	ENSSHAG00000016615	DDX56	99	63.786	Sarcophilus_harrisii
ENSKMAG00000016611	ddx56	99	76.893	ENSSFOG00015012795	ddx56	98	75.719	Scleropages_formosus
ENSKMAG00000016611	ddx56	99	84.464	ENSSMAG00000011280	ddx56	99	86.431	Scophthalmus_maximus
ENSKMAG00000016611	ddx56	99	84.135	ENSSDUG00000023597	ddx56	99	85.027	Seriola_dumerili
ENSKMAG00000016611	ddx56	99	84.135	ENSSLDG00000018369	ddx56	99	85.027	Seriola_lalandi_dorsalis
ENSKMAG00000016611	ddx56	72	78.571	ENSSARG00000014363	DDX56	78	73.134	Sorex_araneus
ENSKMAG00000016611	ddx56	96	73.715	ENSSPUG00000000784	DDX56	96	69.946	Sphenodon_punctatus
ENSKMAG00000016611	ddx56	96	88.247	ENSSPAG00000009392	ddx56	99	87.313	Stegastes_partitus
ENSKMAG00000016611	ddx56	98	63.538	ENSSSCG00000016745	DDX56	98	63.309	Sus_scrofa
ENSKMAG00000016611	ddx56	100	81.915	ENSTRUG00000018623	ddx56	100	81.915	Takifugu_rubripes
ENSKMAG00000016611	ddx56	99	81.947	ENSTNIG00000013593	ddx56	100	81.947	Tetraodon_nigroviridis
ENSKMAG00000016611	ddx56	99	63.849	ENSTBEG00000007119	DDX56	98	62.589	Tupaia_belangeri
ENSKMAG00000016611	ddx56	86	62.140	ENSTTRG00000010552	DDX56	99	62.551	Tursiops_truncatus
ENSKMAG00000016611	ddx56	95	67.200	ENSUAMG00000014194	DDX56	97	64.168	Ursus_americanus
ENSKMAG00000016611	ddx56	95	67.265	ENSUMAG00000009666	DDX56	97	64.168	Ursus_maritimus
ENSKMAG00000016611	ddx56	98	62.795	ENSVVUG00000011905	DDX56	97	63.158	Vulpes_vulpes
ENSKMAG00000016611	ddx56	98	71.429	ENSXETG00000019000	ddx56	99	71.583	Xenopus_tropicalis
ENSKMAG00000016611	ddx56	99	84.843	ENSXCOG00000017413	ddx56	99	84.843	Xiphophorus_couchianus
ENSKMAG00000016611	ddx56	99	87.189	ENSXMAG00000018749	ddx56	100	87.011	Xiphophorus_maculatus