EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016638 (Gene tree)
Gene ID: 108248334
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14919 bases
Position: chrLWHD01000336.1:150454-165372
Accession: 108248334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022415	KH_1	PF00013.29	5.9e-16	1	1
ENSKMAP00000022415	TUDOR	PF00567.24	3.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022700	-	2327	XM_017437048	ENSKMAP00000022415	591 (aa)	XP_017292537	UPI000D530108

Gene Model

Click here to download ENSKMAG00000016638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016638	tdrkh	94	76.029	ENSAPOG00000012653	tdrkh	100	75.986	Acanthochromis_polyacanthus
ENSKMAG00000016638	tdrkh	90	73.469	ENSACIG00000010318	tdrkh	98	73.469	Amphilophus_citrinellus
ENSKMAG00000016638	tdrkh	93	76.703	ENSAOCG00000020623	tdrkh	100	76.703	Amphiprion_ocellaris
ENSKMAG00000016638	tdrkh	93	76.703	ENSAPEG00000018388	tdrkh	100	76.703	Amphiprion_percula
ENSKMAG00000016638	tdrkh	94	74.377	ENSATEG00000023809	tdrkh	100	73.571	Anabas_testudineus
ENSKMAG00000016638	tdrkh	93	72.875	ENSACLG00000003017	tdrkh	100	72.694	Astatotilapia_calliptera
ENSKMAG00000016638	tdrkh	93	61.302	ENSAMXG00000011664	tdrkh	93	60.838	Astyanax_mexicanus
ENSKMAG00000016638	tdrkh	94	66.248	ENSCSEG00000002894	tdrkh	99	66.427	Cynoglossus_semilaevis
ENSKMAG00000016638	tdrkh	58	80.392	ENSCVAG00000020347	tdrkh	78	80.392	Cyprinodon_variegatus
ENSKMAG00000016638	tdrkh	93	59.364	ENSDARG00000053474	tdrkh	94	59.640	Danio_rerio
ENSKMAG00000016638	tdrkh	98	63.167	ENSELUG00000024537	tdrkh	100	63.167	Esox_lucius
ENSKMAG00000016638	tdrkh	93	75.676	ENSFHEG00000003544	tdrkh	100	74.775	Fundulus_heteroclitus
ENSKMAG00000016638	tdrkh	97	61.130	ENSGMOG00000009304	tdrkh	99	60.445	Gadus_morhua
ENSKMAG00000016638	tdrkh	93	70.631	ENSGAFG00000010754	tdrkh	100	70.270	Gambusia_affinis
ENSKMAG00000016638	tdrkh	94	68.905	ENSGACG00000015258	tdrkh	95	68.728	Gasterosteus_aculeatus
ENSKMAG00000016638	tdrkh	93	72.694	ENSHBUG00000017609	tdrkh	100	72.514	Haplochromis_burtoni
ENSKMAG00000016638	tdrkh	93	59.750	ENSIPUG00000009673	tdrkh	99	58.750	Ictalurus_punctatus
ENSKMAG00000016638	tdrkh	96	72.522	ENSLBEG00000027323	tdrkh	99	72.522	Labrus_bergylta
ENSKMAG00000016638	tdrkh	98	47.547	ENSLOCG00000011381	tdrkh	99	48.663	Lepisosteus_oculatus
ENSKMAG00000016638	tdrkh	93	73.201	ENSMAMG00000020343	tdrkh	100	72.482	Mastacembelus_armatus
ENSKMAG00000016638	tdrkh	93	72.875	ENSMZEG00005006755	tdrkh	100	72.694	Maylandia_zebra
ENSKMAG00000016638	tdrkh	93	68.116	ENSMMOG00000020663	tdrkh	92	68.116	Mola_mola
ENSKMAG00000016638	tdrkh	93	72.172	ENSMALG00000015401	tdrkh	100	72.172	Monopterus_albus
ENSKMAG00000016638	tdrkh	93	69.982	ENSNBRG00000023815	tdrkh	100	69.801	Neolamprologus_brichardi
ENSKMAG00000016638	tdrkh	93	69.022	ENSORLG00000029204	tdrkh	99	68.116	Oryzias_latipes
ENSKMAG00000016638	tdrkh	87	68.798	ENSORLG00020016168	tdrkh	97	67.829	Oryzias_latipes_hni
ENSKMAG00000016638	tdrkh	90	68.914	ENSORLG00015014094	tdrkh	96	67.978	Oryzias_latipes_hsok
ENSKMAG00000016638	tdrkh	94	69.162	ENSOMEG00000015063	tdrkh	93	69.189	Oryzias_melastigma
ENSKMAG00000016638	tdrkh	93	57.040	ENSPKIG00000017597	tdrkh	100	57.040	Paramormyrops_kingsleyae
ENSKMAG00000016638	tdrkh	92	66.667	ENSPMGG00000019362	tdrkh	99	66.667	Periophthalmus_magnuspinnatus
ENSKMAG00000016638	tdrkh	94	70.714	ENSPFOG00000013032	tdrkh	95	70.357	Poecilia_formosa
ENSKMAG00000016638	tdrkh	93	71.171	ENSPLAG00000004193	tdrkh	100	70.811	Poecilia_latipinna
ENSKMAG00000016638	tdrkh	93	70.811	ENSPMEG00000016502	tdrkh	100	70.450	Poecilia_mexicana
ENSKMAG00000016638	tdrkh	94	68.393	ENSPREG00000004213	tdrkh	95	68.036	Poecilia_reticulata
ENSKMAG00000016638	tdrkh	90	73.084	ENSPNYG00000022818	tdrkh	97	72.897	Pundamilia_nyererei
ENSKMAG00000016638	tdrkh	93	60.254	ENSPNAG00000008783	tdrkh	94	60.108	Pygocentrus_nattereri
ENSKMAG00000016638	tdrkh	93	55.315	ENSSFOG00015001048	tdrkh	100	55.676	Scleropages_formosus
ENSKMAG00000016638	tdrkh	93	73.118	ENSSMAG00000001532	tdrkh	100	73.118	Scophthalmus_maximus
ENSKMAG00000016638	tdrkh	93	74.468	ENSSDUG00000013393	tdrkh	100	75.355	Seriola_dumerili
ENSKMAG00000016638	tdrkh	95	74.956	ENSSLDG00000017418	tdrkh	100	75.709	Seriola_lalandi_dorsalis
ENSKMAG00000016638	tdrkh	94	77.936	ENSSPAG00000006435	tdrkh	95	77.936	Stegastes_partitus
ENSKMAG00000016638	tdrkh	90	67.978	ENSTRUG00000006644	tdrkh	97	67.041	Takifugu_rubripes
ENSKMAG00000016638	tdrkh	93	67.325	ENSTNIG00000003157	tdrkh	99	67.442	Tetraodon_nigroviridis
ENSKMAG00000016638	tdrkh	76	85.455	ENSXCOG00000016972	tdrkh	98	87.037	Xiphophorus_couchianus
ENSKMAG00000016638	tdrkh	93	68.288	ENSXMAG00000014756	tdrkh	100	67.928	Xiphophorus_maculatus