EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016656 (Gene tree)
Gene ID: 108250090
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 354C-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3671 bases
Position: chrLWHD01000550.1:64716-68386
Accession: 108250090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022424	zf-C2H2	PF00096.26	1.2e-17	1	2
ENSKMAP00000022424	zf-C2H2	PF00096.26	1.2e-17	2	2
ENSKMAP00000022424	zf-met	PF12874.7	5.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022709	-	2528	XM_017439802	ENSKMAP00000022424	457 (aa)	XP_017295291	UPI0007F8AFC4

Gene Model

Click here to download ENSKMAG00000016656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016656	-	55	45.045	ENSKMAG00000021716	-	74	45.045
ENSKMAG00000016656	-	56	31.933	ENSKMAG00000016047	gfi1b	79	31.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016656	-	96	61.678	ENSAPOG00000009709	-	100	63.039	Acanthochromis_polyacanthus
ENSKMAG00000016656	-	97	53.693	ENSMAMG00000002083	-	94	71.560	Mastacembelus_armatus
ENSKMAG00000016656	-	67	43.478	ENSPMGG00000011591	-	81	43.478	Periophthalmus_magnuspinnatus
ENSKMAG00000016656	-	53	38.182	ENSSMAG00000013663	-	83	84.615	Scophthalmus_maximus
ENSKMAG00000016656	-	96	50.200	ENSXMAG00000028364	-	86	71.111	Xiphophorus_maculatus