EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016681 (Gene tree)
Gene ID: 108240282
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 11324 bases
Position: chrLWHD01000073.1:41174-52497
Accession: 108240282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	1	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	2	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	3	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	4	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	5	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	6	7
ENSKMAP00000022478	zf-C2H2	PF00096.26	1.1e-36	7	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	1	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	2	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	3	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	4	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	5	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	6	7
ENSKMAP00000022468	zf-C2H2	PF00096.26	2.2e-34	7	7
ENSKMAP00000022468	zf-met	PF12874.7	9.2e-24	1	5
ENSKMAP00000022468	zf-met	PF12874.7	9.2e-24	2	5
ENSKMAP00000022468	zf-met	PF12874.7	9.2e-24	3	5
ENSKMAP00000022468	zf-met	PF12874.7	9.2e-24	4	5
ENSKMAP00000022468	zf-met	PF12874.7	9.2e-24	5	5
ENSKMAP00000022478	zf-met	PF12874.7	1.3e-23	1	5
ENSKMAP00000022478	zf-met	PF12874.7	1.3e-23	2	5
ENSKMAP00000022478	zf-met	PF12874.7	1.3e-23	3	5
ENSKMAP00000022478	zf-met	PF12874.7	1.3e-23	4	5
ENSKMAP00000022478	zf-met	PF12874.7	1.3e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022753	-	5121	XM_017423645	ENSKMAP00000022468	1307 (aa)	XP_017279134	UPI0007F8D834
ENSKMAT00000022763	-	3948	-	ENSKMAP00000022478	1315 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000016681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016681	sall1a	73	65.854	ENSKMAG00000003846	sall3a	95	65.854
ENSKMAG00000016681	sall1a	58	53.061	ENSKMAG00000010133	znf526	54	53.061
ENSKMAG00000016681	sall1a	57	41.379	ENSKMAG00000001192	-	80	41.379
ENSKMAG00000016681	sall1a	62	43.478	ENSKMAG00000000597	-	90	46.939
ENSKMAG00000016681	sall1a	66	63.462	ENSKMAG00000012418	sall3b	100	63.462
ENSKMAG00000016681	sall1a	56	49.123	ENSKMAG00000021184	-	83	49.123
ENSKMAG00000016681	sall1a	62	50.980	ENSKMAG00000021817	znf236	69	50.980
ENSKMAG00000016681	sall1a	96	65.385	ENSKMAG00000002501	sall4	94	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016681	sall1a	99	67.737	ENSG00000103449	SALL1	100	68.229	Homo_sapiens
ENSKMAG00000016681	sall1a	100	93.497	ENSAPOG00000022764	sall1a	100	93.497	Acanthochromis_polyacanthus
ENSKMAG00000016681	sall1a	99	66.717	ENSAMEG00000006817	SALL1	100	67.067	Ailuropoda_melanoleuca
ENSKMAG00000016681	sall1a	100	92.043	ENSACIG00000004231	sall1a	100	92.043	Amphilophus_citrinellus
ENSKMAG00000016681	sall1a	100	93.879	ENSAOCG00000002800	sall1a	100	93.879	Amphiprion_ocellaris
ENSKMAG00000016681	sall1a	100	93.650	ENSAPEG00000010179	sall1a	100	93.650	Amphiprion_percula
ENSKMAG00000016681	sall1a	99	91.424	ENSATEG00000003006	sall1a	100	91.412	Anabas_testudineus
ENSKMAG00000016681	sall1a	100	69.392	ENSAPLG00000003356	SALL1	100	69.797	Anas_platyrhynchos
ENSKMAG00000016681	sall1a	99	67.725	ENSACAG00000014399	SALL1	97	67.625	Anolis_carolinensis
ENSKMAG00000016681	sall1a	99	68.063	ENSANAG00000027238	SALL1	100	68.063	Aotus_nancymaae
ENSKMAG00000016681	sall1a	100	92.502	ENSACLG00000017148	sall1a	100	92.568	Astatotilapia_calliptera
ENSKMAG00000016681	sall1a	99	51.819	ENSAMXG00000017702	sall1b	99	52.461	Astyanax_mexicanus
ENSKMAG00000016681	sall1a	100	80.061	ENSAMXG00000018599	sall1a	100	80.441	Astyanax_mexicanus
ENSKMAG00000016681	sall1a	100	67.064	ENSBTAG00000008544	SALL1	100	67.463	Bos_taurus
ENSKMAG00000016681	sall1a	99	68.437	ENSCJAG00000001740	SALL1	100	68.633	Callithrix_jacchus
ENSKMAG00000016681	sall1a	99	67.116	ENSCAFG00000009755	SALL1	100	67.790	Canis_familiaris
ENSKMAG00000016681	sall1a	99	67.116	ENSCAFG00020002842	SALL1	100	67.790	Canis_lupus_dingo
ENSKMAG00000016681	sall1a	100	66.941	ENSCHIG00000026074	SALL1	100	67.114	Capra_hircus
ENSKMAG00000016681	sall1a	99	68.284	ENSTSYG00000029464	SALL1	100	68.209	Carlito_syrichta
ENSKMAG00000016681	sall1a	98	67.735	ENSCPOG00000006564	SALL1	100	67.708	Cavia_porcellus
ENSKMAG00000016681	sall1a	99	66.268	ENSCCAG00000001639	SALL1	100	66.443	Cebus_capucinus
ENSKMAG00000016681	sall1a	99	67.913	ENSCATG00000004982	SALL1	100	68.155	Cercocebus_atys
ENSKMAG00000016681	sall1a	99	67.437	ENSCLAG00000006380	SALL1	100	67.336	Chinchilla_lanigera
ENSKMAG00000016681	sall1a	99	67.390	ENSCSAG00000005319	SALL1	100	67.708	Chlorocebus_sabaeus
ENSKMAG00000016681	sall1a	66	66.406	ENSCHOG00000000800	-	69	66.667	Choloepus_hoffmanni
ENSKMAG00000016681	sall1a	100	68.816	ENSCPBG00000015924	SALL1	100	69.579	Chrysemys_picta_bellii
ENSKMAG00000016681	sall1a	99	68.212	ENSCANG00000036664	SALL1	100	68.468	Colobus_angolensis_palliatus
ENSKMAG00000016681	sall1a	99	66.142	ENSCGRG00001023314	-	100	67.091	Cricetulus_griseus_chok1gshd
ENSKMAG00000016681	sall1a	98	66.081	ENSCGRG00000009496	Sall1	100	67.048	Cricetulus_griseus_crigri
ENSKMAG00000016681	sall1a	99	89.618	ENSCSEG00000009349	sall1a	99	89.618	Cynoglossus_semilaevis
ENSKMAG00000016681	sall1a	90	91.230	ENSCVAG00000020513	sall1a	99	91.230	Cyprinodon_variegatus
ENSKMAG00000016681	sall1a	99	47.615	ENSDARG00000075891	sall1b	99	46.767	Danio_rerio
ENSKMAG00000016681	sall1a	100	78.951	ENSDARG00000074319	sall1a	100	78.607	Danio_rerio
ENSKMAG00000016681	sall1a	99	67.836	ENSDNOG00000016413	SALL1	100	67.937	Dasypus_novemcinctus
ENSKMAG00000016681	sall1a	98	67.277	ENSETEG00000015150	SALL1	100	67.278	Echinops_telfairi
ENSKMAG00000016681	sall1a	90	65.385	ENSEBUG00000011732	SALL1	64	65.385	Eptatretus_burgeri
ENSKMAG00000016681	sall1a	62	42.523	ENSEBUG00000008798	SALL1	67	41.379	Eptatretus_burgeri
ENSKMAG00000016681	sall1a	99	67.715	ENSEASG00005014602	SALL1	100	67.865	Equus_asinus_asinus
ENSKMAG00000016681	sall1a	91	65.759	ENSECAG00000011334	SALL1	99	65.813	Equus_caballus
ENSKMAG00000016681	sall1a	98	67.860	ENSEEUG00000002014	SALL1	100	67.634	Erinaceus_europaeus
ENSKMAG00000016681	sall1a	100	54.296	ENSELUG00000017774	-	100	54.688	Esox_lucius
ENSKMAG00000016681	sall1a	100	77.602	ENSELUG00000006159	sall1a	100	77.818	Esox_lucius
ENSKMAG00000016681	sall1a	99	66.841	ENSFCAG00000024654	SALL1	100	67.044	Felis_catus
ENSKMAG00000016681	sall1a	100	69.595	ENSFALG00000000074	SALL1	100	69.398	Ficedula_albicollis
ENSKMAG00000016681	sall1a	100	92.272	ENSFHEG00000012579	sall1a	100	92.272	Fundulus_heteroclitus
ENSKMAG00000016681	sall1a	73	65.854	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSKMAG00000016681	sall1a	100	83.841	ENSGMOG00000006103	sall1a	100	83.841	Gadus_morhua
ENSKMAG00000016681	sall1a	97	40.842	ENSGMOG00000013383	-	99	40.457	Gadus_morhua
ENSKMAG00000016681	sall1a	100	69.595	ENSGALG00000039238	SALL1	100	69.624	Gallus_gallus
ENSKMAG00000016681	sall1a	100	92.895	ENSGAFG00000009964	sall1a	100	92.895	Gambusia_affinis
ENSKMAG00000016681	sall1a	99	89.510	ENSGACG00000016702	sall1a	99	89.510	Gasterosteus_aculeatus
ENSKMAG00000016681	sall1a	100	68.666	ENSGAGG00000013979	SALL1	100	69.337	Gopherus_agassizii
ENSKMAG00000016681	sall1a	99	67.715	ENSGGOG00000000663	SALL1	100	68.080	Gorilla_gorilla
ENSKMAG00000016681	sall1a	100	92.502	ENSHBUG00000022005	sall1a	100	92.568	Haplochromis_burtoni
ENSKMAG00000016681	sall1a	99	67.860	ENSHGLG00000004288	-	100	68.155	Heterocephalus_glaber_female
ENSKMAG00000016681	sall1a	99	67.860	ENSHGLG00100017496	SALL1	100	68.155	Heterocephalus_glaber_male
ENSKMAG00000016681	sall1a	100	84.947	ENSHCOG00000000974	sall1a	100	84.871	Hippocampus_comes
ENSKMAG00000016681	sall1a	100	79.452	ENSIPUG00000016265	SALL1	100	78.751	Ictalurus_punctatus
ENSKMAG00000016681	sall1a	99	50.680	ENSIPUG00000022928	sall1b	99	50.301	Ictalurus_punctatus
ENSKMAG00000016681	sall1a	99	67.976	ENSSTOG00000020885	SALL1	100	67.854	Ictidomys_tridecemlineatus
ENSKMAG00000016681	sall1a	98	89.272	ENSLBEG00000012207	sall1a	95	89.272	Labrus_bergylta
ENSKMAG00000016681	sall1a	97	37.785	ENSLACG00000014018	-	93	39.330	Latimeria_chalumnae
ENSKMAG00000016681	sall1a	100	68.849	ENSLACG00000003556	SALL1	100	69.074	Latimeria_chalumnae
ENSKMAG00000016681	sall1a	100	77.853	ENSLOCG00000007283	sall1b	100	77.475	Lepisosteus_oculatus
ENSKMAG00000016681	sall1a	98	67.429	ENSLAFG00000015251	SALL1	100	67.609	Loxodonta_africana
ENSKMAG00000016681	sall1a	99	68.012	ENSMFAG00000003298	SALL1	100	68.155	Macaca_fascicularis
ENSKMAG00000016681	sall1a	93	67.929	ENSMMUG00000017200	SALL1	100	68.083	Macaca_mulatta
ENSKMAG00000016681	sall1a	93	68.035	ENSMNEG00000034770	SALL1	100	68.083	Macaca_nemestrina
ENSKMAG00000016681	sall1a	99	68.212	ENSMLEG00000036406	SALL1	100	68.437	Mandrillus_leucophaeus
ENSKMAG00000016681	sall1a	99	92.502	ENSMAMG00000004164	sall1a	99	92.651	Mastacembelus_armatus
ENSKMAG00000016681	sall1a	100	92.502	ENSMZEG00005006479	sall1a	100	92.568	Maylandia_zebra
ENSKMAG00000016681	sall1a	98	69.396	ENSMGAG00000004704	SALL1	100	69.425	Meleagris_gallopavo
ENSKMAG00000016681	sall1a	99	65.890	ENSMAUG00000019093	Sall1	100	66.441	Mesocricetus_auratus
ENSKMAG00000016681	sall1a	100	67.491	ENSMICG00000036486	SALL1	100	67.541	Microcebus_murinus
ENSKMAG00000016681	sall1a	99	90.735	ENSMMOG00000016400	sall1a	99	90.735	Mola_mola
ENSKMAG00000016681	sall1a	99	68.240	ENSMODG00000013114	SALL1	99	68.544	Monodelphis_domestica
ENSKMAG00000016681	sall1a	99	91.271	ENSMALG00000013400	sall1a	99	91.271	Monopterus_albus
ENSKMAG00000016681	sall1a	99	66.246	MGP_CAROLIEiJ_G0031362	Sall1	100	66.444	Mus_caroli
ENSKMAG00000016681	sall1a	99	65.975	ENSMUSG00000031665	Sall1	100	66.420	Mus_musculus
ENSKMAG00000016681	sall1a	99	65.727	MGP_PahariEiJ_G0022961	Sall1	100	66.049	Mus_pahari
ENSKMAG00000016681	sall1a	99	65.975	MGP_SPRETEiJ_G0032480	Sall1	100	66.420	Mus_spretus
ENSKMAG00000016681	sall1a	99	66.667	ENSMPUG00000003265	SALL1	99	64.889	Mustela_putorius_furo
ENSKMAG00000016681	sall1a	97	65.699	ENSMLUG00000015541	SALL1	99	66.387	Myotis_lucifugus
ENSKMAG00000016681	sall1a	100	92.655	ENSNBRG00000009307	sall1a	100	92.733	Neolamprologus_brichardi
ENSKMAG00000016681	sall1a	93	80.447	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSKMAG00000016681	sall1a	99	68.219	ENSMEUG00000012206	SALL1	99	68.421	Notamacropus_eugenii
ENSKMAG00000016681	sall1a	91	72.500	ENSOPRG00000005645	SALL1	73	72.165	Ochotona_princeps
ENSKMAG00000016681	sall1a	99	67.715	ENSODEG00000003685	SALL1	100	67.689	Octodon_degus
ENSKMAG00000016681	sall1a	100	92.884	ENSONIG00000002831	sall1a	100	92.884	Oreochromis_niloticus
ENSKMAG00000016681	sall1a	89	73.820	ENSOANG00000013399	SALL1	96	77.869	Ornithorhynchus_anatinus
ENSKMAG00000016681	sall1a	100	90.895	ENSORLG00000013827	sall1a	100	91.723	Oryzias_latipes
ENSKMAG00000016681	sall1a	100	90.972	ENSORLG00020020570	sall1a	100	90.972	Oryzias_latipes_hni
ENSKMAG00000016681	sall1a	100	90.819	ENSORLG00015018830	sall1a	100	91.723	Oryzias_latipes_hsok
ENSKMAG00000016681	sall1a	100	90.666	ENSOMEG00000016043	sall1a	100	90.917	Oryzias_melastigma
ENSKMAG00000016681	sall1a	99	67.836	ENSOGAG00000027316	SALL1	100	68.012	Otolemur_garnettii
ENSKMAG00000016681	sall1a	100	63.146	ENSOARG00000017583	SALL1	100	63.418	Ovis_aries
ENSKMAG00000016681	sall1a	98	67.936	ENSPPAG00000035657	SALL1	100	68.209	Pan_paniscus
ENSKMAG00000016681	sall1a	99	50.226	ENSPPAG00000035136	-	99	50.262	Pan_paniscus
ENSKMAG00000016681	sall1a	100	66.717	ENSPPRG00000023283	SALL1	100	66.963	Panthera_pardus
ENSKMAG00000016681	sall1a	87	71.617	ENSPTIG00000013539	-	94	71.834	Panthera_tigris_altaica
ENSKMAG00000016681	sall1a	99	67.838	ENSPTRG00000008108	SALL1	100	68.155	Pan_troglodytes
ENSKMAG00000016681	sall1a	99	50.458	ENSPTRG00000045256	-	99	50.647	Pan_troglodytes
ENSKMAG00000016681	sall1a	99	68.138	ENSPANG00000024176	SALL1	100	68.362	Papio_anubis
ENSKMAG00000016681	sall1a	100	70.455	ENSPKIG00000005383	-	100	70.758	Paramormyrops_kingsleyae
ENSKMAG00000016681	sall1a	100	71.991	ENSPKIG00000022251	sall1a	100	72.067	Paramormyrops_kingsleyae
ENSKMAG00000016681	sall1a	100	69.421	ENSPSIG00000008582	SALL1	100	69.699	Pelodiscus_sinensis
ENSKMAG00000016681	sall1a	99	84.215	ENSPMGG00000021788	sall1a	99	84.215	Periophthalmus_magnuspinnatus
ENSKMAG00000016681	sall1a	97	48.394	ENSPMAG00000008148	sall1b	97	48.989	Petromyzon_marinus
ENSKMAG00000016681	sall1a	99	68.267	ENSPCIG00000017840	SALL1	99	68.421	Phascolarctos_cinereus
ENSKMAG00000016681	sall1a	98	92.541	ENSPFOG00000015799	sall1a	96	92.541	Poecilia_formosa
ENSKMAG00000016681	sall1a	100	92.819	ENSPLAG00000022539	sall1a	100	92.819	Poecilia_latipinna
ENSKMAG00000016681	sall1a	100	92.972	ENSPMEG00000020894	sall1a	100	92.972	Poecilia_mexicana
ENSKMAG00000016681	sall1a	100	92.513	ENSPREG00000006802	sall1a	100	92.513	Poecilia_reticulata
ENSKMAG00000016681	sall1a	90	66.723	ENSPPYG00000007345	SALL1	96	66.972	Pongo_abelii
ENSKMAG00000016681	sall1a	80	77.143	ENSPCAG00000008162	SALL1	89	77.143	Procavia_capensis
ENSKMAG00000016681	sall1a	99	67.638	ENSPCOG00000028192	SALL1	100	67.884	Propithecus_coquereli
ENSKMAG00000016681	sall1a	66	69.746	ENSPVAG00000015374	SALL1	100	69.827	Pteropus_vampyrus
ENSKMAG00000016681	sall1a	100	92.578	ENSPNYG00000010865	sall1a	100	92.651	Pundamilia_nyererei
ENSKMAG00000016681	sall1a	100	78.327	ENSPNAG00000023644	sall1a	100	78.707	Pygocentrus_nattereri
ENSKMAG00000016681	sall1a	99	65.306	ENSPNAG00000028248	-	67	65.306	Pygocentrus_nattereri
ENSKMAG00000016681	sall1a	99	53.413	ENSPNAG00000007442	sall1b	99	53.614	Pygocentrus_nattereri
ENSKMAG00000016681	sall1a	100	66.342	ENSRNOG00000013907	Sall1	100	66.267	Rattus_norvegicus
ENSKMAG00000016681	sall1a	93	67.903	ENSRBIG00000015707	SALL1	100	68.244	Rhinopithecus_bieti
ENSKMAG00000016681	sall1a	97	68.203	ENSRROG00000035777	SALL1	100	68.145	Rhinopithecus_roxellana
ENSKMAG00000016681	sall1a	99	68.012	ENSSBOG00000032186	SALL1	100	68.155	Saimiri_boliviensis_boliviensis
ENSKMAG00000016681	sall1a	99	67.919	ENSSHAG00000009477	SALL1	99	67.895	Sarcophilus_harrisii
ENSKMAG00000016681	sall1a	98	71.186	ENSSFOG00015001590	sall1a	99	71.164	Scleropages_formosus
ENSKMAG00000016681	sall1a	100	72.851	ENSSFOG00015020020	sall1a	100	72.775	Scleropages_formosus
ENSKMAG00000016681	sall1a	99	92.113	ENSSMAG00000009160	sall1a	99	92.113	Scophthalmus_maximus
ENSKMAG00000016681	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSKMAG00000016681	sall1a	99	93.338	ENSSDUG00000006507	sall1a	99	93.388	Seriola_dumerili
ENSKMAG00000016681	sall1a	99	93.338	ENSSLDG00000017721	sall1a	99	93.338	Seriola_lalandi_dorsalis
ENSKMAG00000016681	sall1a	98	66.819	ENSSARG00000000661	SALL1	100	67.122	Sorex_araneus
ENSKMAG00000016681	sall1a	100	68.393	ENSSPUG00000000156	SALL1	100	68.896	Sphenodon_punctatus
ENSKMAG00000016681	sall1a	100	93.425	ENSSPAG00000021615	sall1a	100	93.425	Stegastes_partitus
ENSKMAG00000016681	sall1a	99	66.841	ENSSSCG00000002836	SALL1	100	66.841	Sus_scrofa
ENSKMAG00000016681	sall1a	100	69.369	ENSTGUG00000007514	SALL1	100	69.173	Taeniopygia_guttata
ENSKMAG00000016681	sall1a	91	86.946	ENSTRUG00000008950	sall1a	100	86.946	Takifugu_rubripes
ENSKMAG00000016681	sall1a	92	86.012	ENSTNIG00000004257	sall1a	100	86.012	Tetraodon_nigroviridis
ENSKMAG00000016681	sall1a	72	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSKMAG00000016681	sall1a	90	66.134	ENSUAMG00000023379	-	92	66.080	Ursus_americanus
ENSKMAG00000016681	sall1a	90	65.913	ENSVVUG00000019383	-	99	66.471	Vulpes_vulpes
ENSKMAG00000016681	sall1a	100	65.033	ENSXETG00000018417	sall1	100	65.106	Xenopus_tropicalis
ENSKMAG00000016681	sall1a	84	61.538	ENSXETG00000017176	sall2	81	61.538	Xenopus_tropicalis
ENSKMAG00000016681	sall1a	100	92.590	ENSXMAG00000016273	sall1a	100	92.745	Xiphophorus_maculatus