EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000016745 (Gene tree)
Gene ID
108230435
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
8371 bases
Position
chrLWHD01000008.1:5451208-5459578
Accession
108230435
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000022570RRM_1PF00076.229e-4412
ENSKMAP00000022570RRM_1PF00076.229e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000022857-1542XM_017406659ENSKMAP00000022570513 (aa)XP_017262148UPI0007F9126C
Gene Model
Click here to download ENSKMAG00000016745's gene model file
Pathways
Pathway IDPathway NameSource
kmr03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016745's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000016745puf60b10077.927ENSKMAG00000010106-10078.352
ENSKMAG00000016745puf60b5637.255ENSKMAG00000005960u2af2a6839.216
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000016745puf60b10085.988ENSG00000179950PUF6010084.837Homo_sapiens
ENSKMAG00000016745puf60b10097.466ENSAPOG00000001713puf60b9897.466Acanthochromis_polyacanthus
ENSKMAG00000016745puf60b10084.069ENSAMEG00000006406PUF609282.726Ailuropoda_melanoleuca
ENSKMAG00000016745puf60b10078.016ENSACIG00000003263-9977.864Amphilophus_citrinellus
ENSKMAG00000016745puf60b10098.246ENSACIG00000021705puf60b10098.246Amphilophus_citrinellus
ENSKMAG00000016745puf60b10097.466ENSAOCG00000005395puf60b10097.466Amphiprion_ocellaris
ENSKMAG00000016745puf60b10083.852ENSAOCG00000015558-9784.241Amphiprion_ocellaris
ENSKMAG00000016745puf60b10074.612ENSAPEG00000001836-9975.723Amphiprion_percula
ENSKMAG00000016745puf60b10091.813ENSAPEG00000011923puf60b9791.813Amphiprion_percula
ENSKMAG00000016745puf60b10098.246ENSATEG00000001730puf60b9898.246Anabas_testudineus
ENSKMAG00000016745puf60b10082.490ENSATEG00000006303-9883.074Anabas_testudineus
ENSKMAG00000016745puf60b10086.564ENSAPLG00000010150PUF609985.413Anas_platyrhynchos
ENSKMAG00000016745puf60b10085.496ENSACAG00000001645PUF609684.542Anolis_carolinensis
ENSKMAG00000016745puf60b10085.797ENSANAG00000018626PUF6010084.645Aotus_nancymaae
ENSKMAG00000016745puf60b10098.246ENSACLG00000004462puf60b10098.246Astatotilapia_calliptera
ENSKMAG00000016745puf60b10081.214ENSAMXG00000041030puf60b10081.784Astyanax_mexicanus
ENSKMAG00000016745puf60b10086.286ENSAMXG00000036570puf60a10083.272Astyanax_mexicanus
ENSKMAG00000016745puf60b10086.372ENSBTAG00000037493PUF609885.221Bos_taurus
ENSKMAG00000016745puf60b8150.667WBGene00004389rnp-68352.303Caenorhabditis_elegans
ENSKMAG00000016745puf60b10085.988ENSCJAG00000021485PUF609784.837Callithrix_jacchus
ENSKMAG00000016745puf60b10085.797ENSCAFG00000001400PUF609284.645Canis_familiaris
ENSKMAG00000016745puf60b10086.180ENSCAFG00020018754PUF609785.029Canis_lupus_dingo
ENSKMAG00000016745puf60b10086.372ENSCHIG00000001618PUF608685.221Capra_hircus
ENSKMAG00000016745puf60b10086.180ENSTSYG00000011912PUF6010085.029Carlito_syrichta
ENSKMAG00000016745puf60b10081.333ENSCPOG00000014613PUF609380.190Cavia_porcellus
ENSKMAG00000016745puf60b10086.180ENSCCAG00000007744PUF609785.029Cebus_capucinus
ENSKMAG00000016745puf60b10085.988ENSCATG00000035405PUF609784.837Cercocebus_atys
ENSKMAG00000016745puf60b10086.180ENSCLAG00000009154PUF609185.029Chinchilla_lanigera
ENSKMAG00000016745puf60b10085.988ENSCSAG00000008878PUF6010084.837Chlorocebus_sabaeus
ENSKMAG00000016745puf60b10085.605ENSCPBG00000005595PUF609784.645Chrysemys_picta_bellii
ENSKMAG00000016745puf60b9849.119ENSCING00000008436-9548.337Ciona_intestinalis
ENSKMAG00000016745puf60b6358.876ENSCING00000002156-8759.403Ciona_intestinalis
ENSKMAG00000016745puf60b9754.095ENSCSAVG00000001385-9953.551Ciona_savignyi
ENSKMAG00000016745puf60b9748.400ENSCSAVG00000004765-9747.929Ciona_savignyi
ENSKMAG00000016745puf60b8185.545ENSCANG00000041843PUF6010084.123Colobus_angolensis_palliatus
ENSKMAG00000016745puf60b10086.372ENSCGRG00001017442Puf609185.221Cricetulus_griseus_chok1gshd
ENSKMAG00000016745puf60b10086.372ENSCGRG00000003717Puf609285.221Cricetulus_griseus_crigri
ENSKMAG00000016745puf60b10097.856ENSCSEG00000019887puf60b9197.856Cynoglossus_semilaevis
ENSKMAG00000016745puf60b10075.337ENSCSEG00000014845-8977.649Cynoglossus_semilaevis
ENSKMAG00000016745puf60b10098.441ENSCVAG00000009386puf60b10098.441Cyprinodon_variegatus
ENSKMAG00000016745puf60b9182.051ENSCVAG00000001560-9881.410Cyprinodon_variegatus
ENSKMAG00000016745puf60b10082.163ENSDARG00000001241puf60b9998.413Danio_rerio
ENSKMAG00000016745puf60b10087.476ENSDARG00000032175puf60a9991.925Danio_rerio
ENSKMAG00000016745puf60b9971.595ENSDNOG00000043278PUF609071.206Dasypus_novemcinctus
ENSKMAG00000016745puf60b10086.372ENSDORG00000004585Puf609485.221Dipodomys_ordii
ENSKMAG00000016745puf60b9749.050FBgn0028577hfp7263.971Drosophila_melanogaster
ENSKMAG00000016745puf60b10059.291ENSEBUG00000014291puf60b8461.800Eptatretus_burgeri
ENSKMAG00000016745puf60b9770.518ENSEBUG00000005470-8869.522Eptatretus_burgeri
ENSKMAG00000016745puf60b10086.180ENSEASG00005009695PUF609785.029Equus_asinus_asinus
ENSKMAG00000016745puf60b10086.180ENSECAG00000024681PUF609685.029Equus_caballus
ENSKMAG00000016745puf60b10088.588ENSELUG00000018443-9888.588Esox_lucius
ENSKMAG00000016745puf60b10088.168ENSELUG00000006507puf60b9985.662Esox_lucius
ENSKMAG00000016745puf60b10086.180ENSFCAG00000001045PUF6010085.029Felis_catus
ENSKMAG00000016745puf60b10077.351ENSFALG00000001136PUF609776.775Ficedula_albicollis
ENSKMAG00000016745puf60b10085.988ENSFDAG00000017177PUF609184.837Fukomys_damarensis
ENSKMAG00000016745puf60b9682.688ENSFHEG00000021687PUF6010083.610Fundulus_heteroclitus
ENSKMAG00000016745puf60b10099.220ENSFHEG00000020046puf60b10099.220Fundulus_heteroclitus
ENSKMAG00000016745puf60b10082.625ENSGMOG00000006392puf60b9982.625Gadus_morhua
ENSKMAG00000016745puf60b6689.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSKMAG00000016745puf60b10080.777ENSGAFG00000004334-9981.109Gambusia_affinis
ENSKMAG00000016745puf60b10099.220ENSGAFG00000021040puf60b10099.220Gambusia_affinis
ENSKMAG00000016745puf60b10073.346ENSGACG00000001484-10072.374Gasterosteus_aculeatus
ENSKMAG00000016745puf60b10084.405ENSGACG00000004717puf60b9784.405Gasterosteus_aculeatus
ENSKMAG00000016745puf60b10085.605ENSGAGG00000013289PUF609184.645Gopherus_agassizii
ENSKMAG00000016745puf60b10085.988ENSGGOG00000004646PUF609784.837Gorilla_gorilla
ENSKMAG00000016745puf60b10083.658ENSHBUG00000009634-9883.268Haplochromis_burtoni
ENSKMAG00000016745puf60b10098.246ENSHBUG00000015118puf60b10098.246Haplochromis_burtoni
ENSKMAG00000016745puf60b10085.988ENSHGLG00000006111PUF609184.837Heterocephalus_glaber_female
ENSKMAG00000016745puf60b10085.988ENSHGLG00100012362PUF609184.837Heterocephalus_glaber_male
ENSKMAG00000016745puf60b10092.857ENSHCOG00000015541puf60b9993.421Hippocampus_comes
ENSKMAG00000016745puf60b9867.451ENSHCOG00000000378-9966.163Hippocampus_comes
ENSKMAG00000016745puf60b10085.221ENSIPUG00000002453puf60a9984.837Ictalurus_punctatus
ENSKMAG00000016745puf60b10082.765ENSIPUG00000004660puf60b9982.386Ictalurus_punctatus
ENSKMAG00000016745puf60b10086.180ENSSTOG00000025037PUF609285.029Ictidomys_tridecemlineatus
ENSKMAG00000016745puf60b10086.372ENSJJAG00000001076Puf609285.221Jaculus_jaculus
ENSKMAG00000016745puf60b10093.957ENSLBEG00000012505puf60b10093.957Labrus_bergylta
ENSKMAG00000016745puf60b7079.891ENSLACG00000005456PUF609978.415Latimeria_chalumnae
ENSKMAG00000016745puf60b10089.126ENSLOCG00000010106puf60b9889.126Lepisosteus_oculatus
ENSKMAG00000016745puf60b10085.029ENSLAFG00000022929PUF609383.877Loxodonta_africana
ENSKMAG00000016745puf60b10085.988ENSMFAG00000043373PUF609884.837Macaca_fascicularis
ENSKMAG00000016745puf60b10085.988ENSMMUG00000013558PUF609784.837Macaca_mulatta
ENSKMAG00000016745puf60b10085.988ENSMNEG00000031099PUF609784.837Macaca_nemestrina
ENSKMAG00000016745puf60b10085.988ENSMLEG00000040009PUF6010084.837Mandrillus_leucophaeus
ENSKMAG00000016745puf60b10096.296ENSMAMG00000010394puf60b10093.738Mastacembelus_armatus
ENSKMAG00000016745puf60b10083.495ENSMAMG00000019476-9883.689Mastacembelus_armatus
ENSKMAG00000016745puf60b10098.246ENSMZEG00005018515puf60b10098.246Maylandia_zebra
ENSKMAG00000016745puf60b10083.658ENSMZEG00005019425-9883.268Maylandia_zebra
ENSKMAG00000016745puf60b10086.564ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSKMAG00000016745puf60b6990.278ENSMAUG00000014267-8888.611Mesocricetus_auratus
ENSKMAG00000016745puf60b9668.849ENSMAUG00000018549-9568.119Mesocricetus_auratus
ENSKMAG00000016745puf60b10086.180ENSMICG00000012226PUF609885.029Microcebus_murinus
ENSKMAG00000016745puf60b10086.372ENSMOCG00000018780Puf609285.221Microtus_ochrogaster
ENSKMAG00000016745puf60b10098.051ENSMMOG00000004217puf60b10098.051Mola_mola
ENSKMAG00000016745puf60b10073.786ENSMMOG00000018059-9977.064Mola_mola
ENSKMAG00000016745puf60b10085.797ENSMODG00000009161PUF609384.645Monodelphis_domestica
ENSKMAG00000016745puf60b10089.864ENSMALG00000006797puf60b9789.864Monopterus_albus
ENSKMAG00000016745puf60b10082.296ENSMALG00000000200-9882.101Monopterus_albus
ENSKMAG00000016745puf60b10086.564MGP_CAROLIEiJ_G0019910Puf609185.413Mus_caroli
ENSKMAG00000016745puf60b10086.564ENSMUSG00000002524Puf609185.413Mus_musculus
ENSKMAG00000016745puf60b10086.564MGP_PahariEiJ_G0019920Puf609185.413Mus_pahari
ENSKMAG00000016745puf60b10086.564MGP_SPRETEiJ_G0020812Puf609185.413Mus_spretus
ENSKMAG00000016745puf60b10085.988ENSMPUG00000008137PUF609184.837Mustela_putorius_furo
ENSKMAG00000016745puf60b10079.655ENSMLUG00000013032-9778.503Myotis_lucifugus
ENSKMAG00000016745puf60b10085.605ENSMLUG00000000238-9284.453Myotis_lucifugus
ENSKMAG00000016745puf60b10086.372ENSNGAG00000000712Puf6010085.221Nannospalax_galili
ENSKMAG00000016745puf60b10083.658ENSNBRG00000017223-9883.268Neolamprologus_brichardi
ENSKMAG00000016745puf60b8395.642ENSNBRG00000013047puf60b9797.602Neolamprologus_brichardi
ENSKMAG00000016745puf60b10085.988ENSNLEG00000002156PUF609784.837Nomascus_leucogenys
ENSKMAG00000016745puf60b7293.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSKMAG00000016745puf60b7190.294ENSODEG00000014024-8990.294Octodon_degus
ENSKMAG00000016745puf60b9863.889ENSODEG00000015513-9762.282Octodon_degus
ENSKMAG00000016745puf60b10083.463ENSONIG00000014030-9783.074Oreochromis_niloticus
ENSKMAG00000016745puf60b10098.246ENSONIG00000006247puf60b9798.246Oreochromis_niloticus
ENSKMAG00000016745puf60b9772.200ENSOANG00000006962PUF609770.741Ornithorhynchus_anatinus
ENSKMAG00000016745puf60b9982.274ENSORLG00000028655-9982.081Oryzias_latipes
ENSKMAG00000016745puf60b10097.856ENSORLG00000012279puf60b10097.856Oryzias_latipes
ENSKMAG00000016745puf60b9982.913ENSORLG00020018144-9782.718Oryzias_latipes_hni
ENSKMAG00000016745puf60b10097.856ENSORLG00020007333puf6010097.856Oryzias_latipes_hni
ENSKMAG00000016745puf60b10097.476ENSORLG00015007718puf60b10097.476Oryzias_latipes_hsok
ENSKMAG00000016745puf60b9982.913ENSORLG00015016833-9782.718Oryzias_latipes_hsok
ENSKMAG00000016745puf60b9982.879ENSOMEG00000022185-9782.685Oryzias_melastigma
ENSKMAG00000016745puf60b10095.611ENSOMEG00000001643puf60b9995.483Oryzias_melastigma
ENSKMAG00000016745puf60b10086.180ENSOGAG00000006259PUF609285.029Otolemur_garnettii
ENSKMAG00000016745puf60b10084.556ENSOARG00000016235PUF609783.398Ovis_aries
ENSKMAG00000016745puf60b10085.988ENSPPAG00000029933PUF609784.837Pan_paniscus
ENSKMAG00000016745puf60b10086.180ENSPPRG00000003257PUF6010085.029Panthera_pardus
ENSKMAG00000016745puf60b10083.877ENSPTIG00000009795PUF609882.726Panthera_tigris_altaica
ENSKMAG00000016745puf60b10085.988ENSPTRG00000043963-9784.837Pan_troglodytes
ENSKMAG00000016745puf60b10085.988ENSPTRG00000020670PUF609784.837Pan_troglodytes
ENSKMAG00000016745puf60b10085.988ENSPANG00000021936PUF609784.837Papio_anubis
ENSKMAG00000016745puf60b10090.448ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSKMAG00000016745puf60b10089.362ENSPKIG00000004295puf60a9992.239Paramormyrops_kingsleyae
ENSKMAG00000016745puf60b10085.988ENSPSIG00000004679PUF609884.837Pelodiscus_sinensis
ENSKMAG00000016745puf60b10096.124ENSPMGG00000013444puf60b9996.124Periophthalmus_magnuspinnatus
ENSKMAG00000016745puf60b10086.372ENSPEMG00000008820Puf609285.221Peromyscus_maniculatus_bairdii
ENSKMAG00000016745puf60b10086.180ENSPCIG00000020270PUF609885.029Phascolarctos_cinereus
ENSKMAG00000016745puf60b10082.136ENSPFOG00000011118-9782.330Poecilia_formosa
ENSKMAG00000016745puf60b10099.415ENSPFOG00000019217puf60b9896.101Poecilia_formosa
ENSKMAG00000016745puf60b10099.415ENSPLAG00000010754puf60b10099.415Poecilia_latipinna
ENSKMAG00000016745puf60b10082.524ENSPLAG00000017025-9082.330Poecilia_latipinna
ENSKMAG00000016745puf60b10099.415ENSPMEG00000000838puf60b10099.415Poecilia_mexicana
ENSKMAG00000016745puf60b10082.330ENSPMEG00000009767-9082.524Poecilia_mexicana
ENSKMAG00000016745puf60b10096.774ENSPREG00000005440puf60b9896.939Poecilia_reticulata
ENSKMAG00000016745puf60b8183.886ENSPPYG00000018951-9582.464Pongo_abelii
ENSKMAG00000016745puf60b8185.545ENSPCAG00000014837PUF6010084.123Procavia_capensis
ENSKMAG00000016745puf60b10085.988ENSPCOG00000027981PUF609884.837Propithecus_coquereli
ENSKMAG00000016745puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSKMAG00000016745puf60b10098.246ENSPNYG00000002556puf60b10098.246Pundamilia_nyererei
ENSKMAG00000016745puf60b10083.658ENSPNYG00000004273-9883.268Pundamilia_nyererei
ENSKMAG00000016745puf60b10084.526ENSPNAG00000019909puf60a9984.749Pygocentrus_nattereri
ENSKMAG00000016745puf60b10080.507ENSPNAG00000019415puf60b8980.312Pygocentrus_nattereri
ENSKMAG00000016745puf60b10086.564ENSRNOG00000009960Puf609285.413Rattus_norvegicus
ENSKMAG00000016745puf60b10085.988ENSRBIG00000035274PUF609784.837Rhinopithecus_bieti
ENSKMAG00000016745puf60b10085.988ENSRROG00000029360PUF609884.837Rhinopithecus_roxellana
ENSKMAG00000016745puf60b10084.645ENSSBOG00000027089PUF609783.493Saimiri_boliviensis_boliviensis
ENSKMAG00000016745puf60b9085.714ENSSHAG00000006668PUF608984.435Sarcophilus_harrisii
ENSKMAG00000016745puf60b10082.726ENSSFOG00015019619puf60b9985.425Scleropages_formosus
ENSKMAG00000016745puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSKMAG00000016745puf60b7698.976ENSSMAG00000016381puf60b7598.976Scophthalmus_maximus
ENSKMAG00000016745puf60b10096.183ENSSDUG00000009935puf60b9996.183Seriola_dumerili
ENSKMAG00000016745puf60b9783.936ENSSDUG00000007048-9584.770Seriola_dumerili
ENSKMAG00000016745puf60b10081.731ENSSLDG00000007366-9981.958Seriola_lalandi_dorsalis
ENSKMAG00000016745puf60b10098.246ENSSLDG00000024011puf60b10095.636Seriola_lalandi_dorsalis
ENSKMAG00000016745puf60b6578.171ENSSPUG00000013518PUF609278.171Sphenodon_punctatus
ENSKMAG00000016745puf60b10083.527ENSSPAG00000020285-10083.915Stegastes_partitus
ENSKMAG00000016745puf60b10095.256ENSSPAG00000012144puf60b10095.256Stegastes_partitus
ENSKMAG00000016745puf60b10086.180ENSSSCG00000038800PUF609781.958Sus_scrofa
ENSKMAG00000016745puf60b10083.908ENSTGUG00000012797-9983.269Taeniopygia_guttata
ENSKMAG00000016745puf60b10078.794ENSTRUG00000008843-10078.405Takifugu_rubripes
ENSKMAG00000016745puf60b10097.466ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSKMAG00000016745puf60b10097.271ENSTNIG00000013675puf60b9997.271Tetraodon_nigroviridis
ENSKMAG00000016745puf60b10079.922ENSTNIG00000003069-9978.947Tetraodon_nigroviridis
ENSKMAG00000016745puf60b7766.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSKMAG00000016745puf60b5586.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSKMAG00000016745puf60b10084.837ENSTTRG00000017088PUF6010084.069Tursiops_truncatus
ENSKMAG00000016745puf60b10086.180ENSUAMG00000024917PUF609785.029Ursus_americanus
ENSKMAG00000016745puf60b10081.190ENSUMAG00000000272PUF609279.846Ursus_maritimus
ENSKMAG00000016745puf60b10086.180ENSVVUG00000022527PUF6010085.029Vulpes_vulpes
ENSKMAG00000016745puf60b10083.877ENSXETG00000012469puf609782.917Xenopus_tropicalis
ENSKMAG00000016745puf60b10096.101ENSXCOG00000012355puf60b10096.101Xiphophorus_couchianus
ENSKMAG00000016745puf60b10079.223ENSXMAG00000010507-9879.029Xiphophorus_maculatus
ENSKMAG00000016745puf60b10099.415ENSXMAG00000001862puf60b10099.415Xiphophorus_maculatus

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