EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016784 (Gene tree)
Gene ID: 108240261
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 71076 bases
Position: chrLWHD01000073.1:415349-486424
Accession: 108240261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022760	ResIII	PF04851.15	4.6e-06	1	1
ENSKMAP00000022841	ResIII	PF04851.15	5.2e-06	1	1
ENSKMAP00000022721	ResIII	PF04851.15	6e-06	1	1
ENSKMAP00000022760	BRK	PF07533.16	1.4e-31	1	2
ENSKMAP00000022760	BRK	PF07533.16	1.4e-31	2	2
ENSKMAP00000022841	BRK	PF07533.16	2.1e-31	1	2
ENSKMAP00000022841	BRK	PF07533.16	2.1e-31	2	2
ENSKMAP00000022721	BRK	PF07533.16	2.2e-31	1	2
ENSKMAP00000022721	BRK	PF07533.16	2.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023131	-	8595	-	ENSKMAP00000022841	2864 (aa)	-	-
ENSKMAT00000023010	-	12188	XM_017423608	ENSKMAP00000022721	2998 (aa)	XP_017279097	UPI0007F86CFA
ENSKMAT00000023051	-	10211	XM_017423612	ENSKMAP00000022760	2494 (aa)	XP_017279101	UPI0007F90483

Gene Model

Click here to download ENSKMAG00000016784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016784	chd9	57	68.880	ENSKMAG00000009724	chd7	59	68.920
ENSKMAG00000016784	chd9	70	61.519	ENSKMAG00000020106	chd8	70	61.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016784	chd9	96	69.753	ENSG00000177200	CHD9	97	69.726	Homo_sapiens
ENSKMAG00000016784	chd9	99	90.616	ENSAPOG00000023034	chd9	97	91.414	Acanthochromis_polyacanthus
ENSKMAG00000016784	chd9	66	75.074	ENSAMEG00000016232	CHD9	84	70.353	Ailuropoda_melanoleuca
ENSKMAG00000016784	chd9	94	85.690	ENSACIG00000004097	chd9	95	80.336	Amphilophus_citrinellus
ENSKMAG00000016784	chd9	99	91.027	ENSAOCG00000005487	chd9	97	91.829	Amphiprion_ocellaris
ENSKMAG00000016784	chd9	99	91.067	ENSAPEG00000009859	chd9	97	91.871	Amphiprion_percula
ENSKMAG00000016784	chd9	99	89.854	ENSATEG00000002748	chd9	97	86.261	Anabas_testudineus
ENSKMAG00000016784	chd9	94	70.898	ENSAPLG00000002826	CHD9	61	76.779	Anas_platyrhynchos
ENSKMAG00000016784	chd9	66	75.403	ENSACAG00000016150	CHD9	83	70.536	Anolis_carolinensis
ENSKMAG00000016784	chd9	96	60.744	ENSANAG00000015630	CHD9	92	71.025	Aotus_nancymaae
ENSKMAG00000016784	chd9	98	85.755	ENSACLG00000016899	chd9	97	81.474	Astatotilapia_calliptera
ENSKMAG00000016784	chd9	99	76.013	ENSAMXG00000005652	chd9	97	77.310	Astyanax_mexicanus
ENSKMAG00000016784	chd9	96	60.828	ENSBTAG00000002287	CHD9	84	69.987	Bos_taurus
ENSKMAG00000016784	chd9	94	69.841	ENSCJAG00000001573	CHD9	92	71.378	Callithrix_jacchus
ENSKMAG00000016784	chd9	96	61.350	ENSCAFG00000009699	CHD9	84	70.017	Canis_familiaris
ENSKMAG00000016784	chd9	96	61.350	ENSCAFG00020002879	CHD9	91	71.731	Canis_lupus_dingo
ENSKMAG00000016784	chd9	96	61.155	ENSTSYG00000007693	CHD9	91	71.025	Carlito_syrichta
ENSKMAG00000016784	chd9	72	60.459	ENSCAPG00000011604	CHD9	58	63.813	Cavia_aperea
ENSKMAG00000016784	chd9	66	70.322	ENSCPOG00000036544	CHD9	84	66.624	Cavia_porcellus
ENSKMAG00000016784	chd9	66	74.821	ENSCCAG00000036178	CHD9	92	71.631	Cebus_capucinus
ENSKMAG00000016784	chd9	96	60.983	ENSCATG00000036753	CHD9	91	71.080	Cercocebus_atys
ENSKMAG00000016784	chd9	96	61.581	ENSCLAG00000007137	CHD9	96	81.043	Chinchilla_lanigera
ENSKMAG00000016784	chd9	66	74.896	ENSCSAG00000005311	CHD9	84	69.815	Chlorocebus_sabaeus
ENSKMAG00000016784	chd9	65	91.927	ENSCHOG00000003935	CHD9	58	91.885	Choloepus_hoffmanni
ENSKMAG00000016784	chd9	87	82.524	ENSCPBG00000012459	CHD9	81	82.524	Chrysemys_picta_bellii
ENSKMAG00000016784	chd9	66	74.896	ENSCANG00000030349	CHD9	91	71.731	Colobus_angolensis_palliatus
ENSKMAG00000016784	chd9	95	69.558	ENSCGRG00001016150	Chd9	85	70.227	Cricetulus_griseus_chok1gshd
ENSKMAG00000016784	chd9	95	69.558	ENSCGRG00000012850	Chd9	99	77.802	Cricetulus_griseus_crigri
ENSKMAG00000016784	chd9	99	85.646	ENSCSEG00000009209	chd9	96	85.401	Cynoglossus_semilaevis
ENSKMAG00000016784	chd9	94	89.725	ENSCVAG00000016195	chd9	97	83.615	Cyprinodon_variegatus
ENSKMAG00000016784	chd9	99	76.154	ENSDARG00000074498	chd9	97	77.522	Danio_rerio
ENSKMAG00000016784	chd9	77	70.696	ENSDNOG00000006045	CHD9	97	70.329	Dasypus_novemcinctus
ENSKMAG00000016784	chd9	69	68.585	ENSDORG00000008523	-	96	70.630	Dipodomys_ordii
ENSKMAG00000016784	chd9	80	92.063	ENSETEG00000009565	CHD9	69	92.063	Echinops_telfairi
ENSKMAG00000016784	chd9	91	72.543	ENSEASG00005014832	CHD9	96	76.891	Equus_asinus_asinus
ENSKMAG00000016784	chd9	66	75.045	ENSECAG00000011505	CHD9	85	70.059	Equus_caballus
ENSKMAG00000016784	chd9	74	86.087	ENSEEUG00000014515	CHD9	74	83.978	Erinaceus_europaeus
ENSKMAG00000016784	chd9	99	77.316	ENSELUG00000006031	chd9	97	77.975	Esox_lucius
ENSKMAG00000016784	chd9	94	70.329	ENSFCAG00000022534	CHD9	91	72.085	Felis_catus
ENSKMAG00000016784	chd9	96	70.654	ENSFALG00000013276	CHD9	97	70.501	Ficedula_albicollis
ENSKMAG00000016784	chd9	96	61.159	ENSFDAG00000021037	CHD9	84	69.828	Fukomys_damarensis
ENSKMAG00000016784	chd9	96	90.518	ENSFHEG00000006068	chd9	96	89.722	Fundulus_heteroclitus
ENSKMAG00000016784	chd9	79	86.314	ENSGMOG00000006040	chd9	81	89.552	Gadus_morhua
ENSKMAG00000016784	chd9	92	71.734	ENSGALG00000039178	CHD9	85	72.191	Gallus_gallus
ENSKMAG00000016784	chd9	99	89.550	ENSGAFG00000010014	chd9	96	90.522	Gambusia_affinis
ENSKMAG00000016784	chd9	96	84.726	ENSGACG00000016694	chd9	95	89.004	Gasterosteus_aculeatus
ENSKMAG00000016784	chd9	66	74.642	ENSGGOG00000014816	CHD9	92	71.378	Gorilla_gorilla
ENSKMAG00000016784	chd9	99	86.271	ENSHBUG00000023322	chd9	96	88.260	Haplochromis_burtoni
ENSKMAG00000016784	chd9	94	70.279	ENSHGLG00000014938	CHD9	96	80.975	Heterocephalus_glaber_female
ENSKMAG00000016784	chd9	96	82.752	ENSHCOG00000000937	chd9	97	82.684	Hippocampus_comes
ENSKMAG00000016784	chd9	99	76.942	ENSIPUG00000016448	chd9	96	77.934	Ictalurus_punctatus
ENSKMAG00000016784	chd9	96	61.472	ENSSTOG00000022273	CHD9	96	80.856	Ictidomys_tridecemlineatus
ENSKMAG00000016784	chd9	66	71.152	ENSJJAG00000015741	-	96	71.378	Jaculus_jaculus
ENSKMAG00000016784	chd9	99	88.684	ENSLBEG00000012077	chd9	96	89.582	Labrus_bergylta
ENSKMAG00000016784	chd9	97	65.859	ENSLACG00000005557	CHD9	84	66.653	Latimeria_chalumnae
ENSKMAG00000016784	chd9	97	75.918	ENSLOCG00000007225	chd9	97	76.746	Lepisosteus_oculatus
ENSKMAG00000016784	chd9	66	74.613	ENSLAFG00000015374	CHD9	80	69.470	Loxodonta_africana
ENSKMAG00000016784	chd9	90	71.124	ENSMFAG00000041354	CHD9	93	70.956	Macaca_fascicularis
ENSKMAG00000016784	chd9	66	74.896	ENSMMUG00000016310	CHD9	91	71.731	Macaca_mulatta
ENSKMAG00000016784	chd9	96	60.740	ENSMNEG00000031494	CHD9	86	71.837	Macaca_nemestrina
ENSKMAG00000016784	chd9	66	74.955	ENSMLEG00000043219	CHD9	91	71.731	Mandrillus_leucophaeus
ENSKMAG00000016784	chd9	99	89.068	ENSMAMG00000003909	chd9	97	84.476	Mastacembelus_armatus
ENSKMAG00000016784	chd9	99	88.679	ENSMZEG00005006581	chd9	96	89.996	Maylandia_zebra
ENSKMAG00000016784	chd9	95	65.822	ENSMGAG00000004642	CHD9	59	71.798	Meleagris_gallopavo
ENSKMAG00000016784	chd9	96	60.907	ENSMICG00000016679	CHD9	91	72.085	Microcebus_murinus
ENSKMAG00000016784	chd9	97	84.530	ENSMMOG00000016406	chd9	97	78.713	Mola_mola
ENSKMAG00000016784	chd9	87	63.549	ENSMODG00000013142	-	95	77.857	Monodelphis_domestica
ENSKMAG00000016784	chd9	98	86.902	ENSMALG00000013306	chd9	99	80.260	Monopterus_albus
ENSKMAG00000016784	chd9	96	60.612	MGP_CAROLIEiJ_G0031364	Chd9	84	69.617	Mus_caroli
ENSKMAG00000016784	chd9	96	60.983	ENSMUSG00000056608	Chd9	99	76.164	Mus_musculus
ENSKMAG00000016784	chd9	94	67.807	MGP_PahariEiJ_G0022964	Chd9	84	68.600	Mus_pahari
ENSKMAG00000016784	chd9	96	60.489	MGP_SPRETEiJ_G0032483	Chd9	84	69.881	Mus_spretus
ENSKMAG00000016784	chd9	96	61.191	ENSMPUG00000003285	CHD9	84	70.130	Mustela_putorius_furo
ENSKMAG00000016784	chd9	66	74.732	ENSMLUG00000004456	CHD9	84	69.139	Myotis_lucifugus
ENSKMAG00000016784	chd9	99	87.957	ENSNBRG00000009423	chd9	96	89.252	Neolamprologus_brichardi
ENSKMAG00000016784	chd9	89	61.536	ENSNLEG00000001026	CHD9	86	71.950	Nomascus_leucogenys
ENSKMAG00000016784	chd9	72	96.241	ENSMEUG00000008222	-	76	91.083	Notamacropus_eugenii
ENSKMAG00000016784	chd9	97	60.577	ENSODEG00000004466	CHD9	85	69.104	Octodon_degus
ENSKMAG00000016784	chd9	97	88.501	ENSONIG00000002816	chd9	96	90.055	Oreochromis_niloticus
ENSKMAG00000016784	chd9	66	75.848	ENSOANG00000013401	CHD9	85	71.123	Ornithorhynchus_anatinus
ENSKMAG00000016784	chd9	80	69.541	ENSOCUG00000001016	CHD9	96	69.435	Oryctolagus_cuniculus
ENSKMAG00000016784	chd9	96	88.264	ENSORLG00000013810	chd9	96	85.118	Oryzias_latipes
ENSKMAG00000016784	chd9	97	83.532	ENSORLG00020020665	chd9	96	78.507	Oryzias_latipes_hni
ENSKMAG00000016784	chd9	96	88.487	ENSORLG00015019126	chd9	96	87.639	Oryzias_latipes_hsok
ENSKMAG00000016784	chd9	54	90.657	ENSOMEG00000015978	chd9	99	80.935	Oryzias_melastigma
ENSKMAG00000016784	chd9	94	69.979	ENSOGAG00000002110	CHD9	84	69.945	Otolemur_garnettii
ENSKMAG00000016784	chd9	66	74.777	ENSOARG00000017664	CHD9	84	69.899	Ovis_aries
ENSKMAG00000016784	chd9	80	68.521	ENSPPAG00000039388	-	96	69.819	Pan_paniscus
ENSKMAG00000016784	chd9	94	70.333	ENSPPRG00000004801	CHD9	91	72.085	Panthera_pardus
ENSKMAG00000016784	chd9	94	69.208	ENSPTIG00000021854	CHD9	91	62.898	Panthera_tigris_altaica
ENSKMAG00000016784	chd9	96	61.248	ENSPTRG00000008113	CHD9	92	71.378	Pan_troglodytes
ENSKMAG00000016784	chd9	80	69.344	ENSPANG00000019307	CHD9	97	69.206	Papio_anubis
ENSKMAG00000016784	chd9	95	72.248	ENSPKIG00000025401	-	97	63.410	Paramormyrops_kingsleyae
ENSKMAG00000016784	chd9	97	76.926	ENSPKIG00000021876	chd9	96	77.718	Paramormyrops_kingsleyae
ENSKMAG00000016784	chd9	55	77.401	ENSPSIG00000008099	CHD9	79	78.258	Pelodiscus_sinensis
ENSKMAG00000016784	chd9	86	70.814	ENSPCIG00000017215	CHD9	98	73.358	Phascolarctos_cinereus
ENSKMAG00000016784	chd9	96	90.747	ENSPFOG00000015839	chd9	97	86.719	Poecilia_formosa
ENSKMAG00000016784	chd9	96	91.029	ENSPLAG00000011118	chd9	96	90.935	Poecilia_latipinna
ENSKMAG00000016784	chd9	96	88.399	ENSPMEG00000015106	chd9	96	83.858	Poecilia_mexicana
ENSKMAG00000016784	chd9	96	91.022	ENSPREG00000006473	chd9	96	90.352	Poecilia_reticulata
ENSKMAG00000016784	chd9	96	61.283	ENSPPYG00000007348	CHD9	85	70.391	Pongo_abelii
ENSKMAG00000016784	chd9	68	80.000	ENSPCAG00000007564	CHD9	74	81.036	Procavia_capensis
ENSKMAG00000016784	chd9	96	59.753	ENSPCOG00000028433	CHD9	91	71.025	Propithecus_coquereli
ENSKMAG00000016784	chd9	91	72.601	ENSPVAG00000015617	CHD9	82	72.742	Pteropus_vampyrus
ENSKMAG00000016784	chd9	99	88.479	ENSPNYG00000010947	chd9	96	89.252	Pundamilia_nyererei
ENSKMAG00000016784	chd9	97	78.008	ENSPNAG00000024141	chd9	97	78.273	Pygocentrus_nattereri
ENSKMAG00000016784	chd9	89	59.963	ENSRNOG00000049302	Chd9	93	58.408	Rattus_norvegicus
ENSKMAG00000016784	chd9	80	69.344	ENSRBIG00000035553	CHD9	96	70.025	Rhinopithecus_bieti
ENSKMAG00000016784	chd9	94	70.395	ENSRROG00000033278	CHD9	96	70.156	Rhinopithecus_roxellana
ENSKMAG00000016784	chd9	96	60.847	ENSSBOG00000030240	CHD9	92	71.378	Saimiri_boliviensis_boliviensis
ENSKMAG00000016784	chd9	98	68.941	ENSSHAG00000002719	CHD9	85	70.926	Sarcophilus_harrisii
ENSKMAG00000016784	chd9	96	78.378	ENSSFOG00015020209	chd9	97	78.378	Scleropages_formosus
ENSKMAG00000016784	chd9	98	72.925	ENSSFOG00015001327	chd9	96	73.617	Scleropages_formosus
ENSKMAG00000016784	chd9	96	90.669	ENSSMAG00000008953	chd9	96	90.496	Scophthalmus_maximus
ENSKMAG00000016784	chd9	99	89.751	ENSSDUG00000006139	chd9	99	89.484	Seriola_dumerili
ENSKMAG00000016784	chd9	99	90.233	ENSSLDG00000017818	chd9	99	89.968	Seriola_lalandi_dorsalis
ENSKMAG00000016784	chd9	71	77.741	ENSSARG00000010632	CHD9	53	78.039	Sorex_araneus
ENSKMAG00000016784	chd9	99	90.664	ENSSPAG00000021649	chd9	99	90.157	Stegastes_partitus
ENSKMAG00000016784	chd9	94	69.067	ENSSSCG00000033591	CHD9	62	75.195	Sus_scrofa
ENSKMAG00000016784	chd9	86	72.536	ENSTGUG00000007476	CHD9	86	72.845	Taeniopygia_guttata
ENSKMAG00000016784	chd9	99	84.855	ENSTRUG00000009125	chd9	97	79.393	Takifugu_rubripes
ENSKMAG00000016784	chd9	77	69.794	ENSTNIG00000003825	chd9	98	69.794	Tetraodon_nigroviridis
ENSKMAG00000016784	chd9	61	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSKMAG00000016784	chd9	82	74.747	ENSTTRG00000012674	CHD9	77	70.403	Tursiops_truncatus
ENSKMAG00000016784	chd9	61	68.985	ENSUAMG00000022706	CHD9	95	68.729	Ursus_americanus
ENSKMAG00000016784	chd9	80	73.539	ENSUMAG00000004043	CHD9	93	86.311	Ursus_maritimus
ENSKMAG00000016784	chd9	72	76.100	ENSVPAG00000001374	CHD9	81	69.672	Vicugna_pacos
ENSKMAG00000016784	chd9	96	61.316	ENSVVUG00000019435	CHD9	84	69.891	Vulpes_vulpes
ENSKMAG00000016784	chd9	93	69.059	ENSXETG00000000349	chd9	78	75.856	Xenopus_tropicalis
ENSKMAG00000016784	chd9	99	88.705	ENSXCOG00000012997	chd9	96	89.904	Xiphophorus_couchianus
ENSKMAG00000016784	chd9	99	90.273	ENSXMAG00000016192	chd9	96	91.546	Xiphophorus_maculatus