EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016997 (Gene tree)
Gene ID: 108235075
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 174649 bases
Position: chrLWHD01000032.1:3691710-3866358
Accession: 108235075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022955	TUDOR	PF00567.24	2.7e-26	1	1
ENSKMAP00000022955	SNase	PF00565.17	1.9e-66	1	4
ENSKMAP00000022955	SNase	PF00565.17	1.9e-66	2	4
ENSKMAP00000022955	SNase	PF00565.17	1.9e-66	3	4
ENSKMAP00000022955	SNase	PF00565.17	1.9e-66	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023249	-	4414	XM_017414826	ENSKMAP00000022955	911 (aa)	XP_017270315	UPI0007F8FBBB

Gene Model

Click here to download ENSKMAG00000016997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016997	snd1	98	84.899	ENSG00000197157	SND1	100	83.882	Homo_sapiens
ENSKMAG00000016997	snd1	100	96.268	ENSAPOG00000017599	snd1	100	96.268	Acanthochromis_polyacanthus
ENSKMAG00000016997	snd1	100	84.026	ENSAMEG00000004664	SND1	94	84.026	Ailuropoda_melanoleuca
ENSKMAG00000016997	snd1	100	92.536	ENSACIG00000003551	snd1	100	92.536	Amphilophus_citrinellus
ENSKMAG00000016997	snd1	100	96.378	ENSAOCG00000014166	snd1	100	96.378	Amphiprion_ocellaris
ENSKMAG00000016997	snd1	100	96.378	ENSAPEG00000007067	snd1	100	96.378	Amphiprion_percula
ENSKMAG00000016997	snd1	98	95.749	ENSATEG00000018475	snd1	89	95.749	Anabas_testudineus
ENSKMAG00000016997	snd1	98	85.011	ENSANAG00000034463	SND1	100	83.991	Aotus_nancymaae
ENSKMAG00000016997	snd1	100	94.292	ENSACLG00000022897	snd1	100	94.292	Astatotilapia_calliptera
ENSKMAG00000016997	snd1	99	90.549	ENSAMXG00000016318	snd1	99	90.549	Astyanax_mexicanus
ENSKMAG00000016997	snd1	98	85.011	ENSBTAG00000010692	SND1	100	83.991	Bos_taurus
ENSKMAG00000016997	snd1	99	47.368	WBGene00006626	tsn-1	99	47.368	Caenorhabditis_elegans
ENSKMAG00000016997	snd1	98	84.899	ENSCJAG00000017668	SND1	100	83.882	Callithrix_jacchus
ENSKMAG00000016997	snd1	100	84.211	ENSCAFG00000001700	SND1	100	84.211	Canis_familiaris
ENSKMAG00000016997	snd1	100	84.211	ENSCAFG00020021639	SND1	100	84.211	Canis_lupus_dingo
ENSKMAG00000016997	snd1	98	84.899	ENSCHIG00000023390	SND1	100	83.882	Capra_hircus
ENSKMAG00000016997	snd1	70	87.719	ENSTSYG00000004979	SND1	96	87.719	Carlito_syrichta
ENSKMAG00000016997	snd1	97	74.775	ENSCAPG00000010677	SND1	97	74.136	Cavia_aperea
ENSKMAG00000016997	snd1	98	84.899	ENSCPOG00000006251	SND1	100	83.882	Cavia_porcellus
ENSKMAG00000016997	snd1	98	85.011	ENSCCAG00000036847	SND1	100	83.991	Cebus_capucinus
ENSKMAG00000016997	snd1	98	85.123	ENSCATG00000035214	SND1	99	85.102	Cercocebus_atys
ENSKMAG00000016997	snd1	98	84.899	ENSCLAG00000011796	SND1	98	85.906	Chinchilla_lanigera
ENSKMAG00000016997	snd1	98	85.123	ENSCSAG00000010182	SND1	100	84.101	Chlorocebus_sabaeus
ENSKMAG00000016997	snd1	77	76.238	ENSCHOG00000002218	SND1	86	76.238	Choloepus_hoffmanni
ENSKMAG00000016997	snd1	100	84.632	ENSCPBG00000018094	SND1	100	84.632	Chrysemys_picta_bellii
ENSKMAG00000016997	snd1	98	56.921	ENSCING00000000524	-	99	56.100	Ciona_intestinalis
ENSKMAG00000016997	snd1	99	57.314	ENSCSAVG00000008807	-	99	57.112	Ciona_savignyi
ENSKMAG00000016997	snd1	98	85.123	ENSCANG00000035119	SND1	100	84.101	Colobus_angolensis_palliatus
ENSKMAG00000016997	snd1	98	84.452	ENSCGRG00001022514	Snd1	98	85.570	Cricetulus_griseus_chok1gshd
ENSKMAG00000016997	snd1	97	84.424	ENSCGRG00000012277	Snd1	99	84.424	Cricetulus_griseus_crigri
ENSKMAG00000016997	snd1	100	93.524	ENSCSEG00000008661	snd1	100	93.524	Cynoglossus_semilaevis
ENSKMAG00000016997	snd1	100	96.378	ENSCVAG00000010316	snd1	100	96.378	Cyprinodon_variegatus
ENSKMAG00000016997	snd1	100	89.814	ENSDARG00000006766	snd1	99	91.534	Danio_rerio
ENSKMAG00000016997	snd1	97	82.790	ENSDNOG00000006795	SND1	100	82.790	Dasypus_novemcinctus
ENSKMAG00000016997	snd1	98	84.564	ENSDORG00000000336	Snd1	100	83.553	Dipodomys_ordii
ENSKMAG00000016997	snd1	98	50.163	FBgn0035121	Tudor-SN	98	50.054	Drosophila_melanogaster
ENSKMAG00000016997	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSKMAG00000016997	snd1	60	64.921	ENSEBUG00000014201	-	84	77.174	Eptatretus_burgeri
ENSKMAG00000016997	snd1	98	83.718	ENSEASG00005008513	SND1	100	82.740	Equus_asinus_asinus
ENSKMAG00000016997	snd1	98	84.899	ENSECAG00000011451	SND1	100	83.772	Equus_caballus
ENSKMAG00000016997	snd1	98	75.168	ENSEEUG00000014737	SND1	100	74.342	Erinaceus_europaeus
ENSKMAG00000016997	snd1	99	88.901	ENSELUG00000001805	snd1	96	88.901	Esox_lucius
ENSKMAG00000016997	snd1	100	84.101	ENSFCAG00000008289	SND1	100	84.101	Felis_catus
ENSKMAG00000016997	snd1	98	84.564	ENSFDAG00000015881	SND1	100	83.553	Fukomys_damarensis
ENSKMAG00000016997	snd1	100	93.878	ENSFHEG00000004093	snd1	99	95.563	Fundulus_heteroclitus
ENSKMAG00000016997	snd1	75	83.898	ENSGMOG00000018932	snd1	66	83.898	Gadus_morhua
ENSKMAG00000016997	snd1	100	97.036	ENSGAFG00000008421	snd1	100	97.036	Gambusia_affinis
ENSKMAG00000016997	snd1	100	61.280	ENSGACG00000019793	snd1	100	61.280	Gasterosteus_aculeatus
ENSKMAG00000016997	snd1	99	84.146	ENSGGOG00000009614	SND1	100	84.146	Gorilla_gorilla
ENSKMAG00000016997	snd1	100	94.182	ENSHBUG00000019135	snd1	100	94.182	Haplochromis_burtoni
ENSKMAG00000016997	snd1	98	84.564	ENSHGLG00000003618	SND1	98	85.738	Heterocephalus_glaber_female
ENSKMAG00000016997	snd1	99	83.718	ENSHGLG00100012449	SND1	99	83.718	Heterocephalus_glaber_male
ENSKMAG00000016997	snd1	100	92.536	ENSHCOG00000005266	snd1	100	92.536	Hippocampus_comes
ENSKMAG00000016997	snd1	99	89.023	ENSIPUG00000013279	snd1	99	89.023	Ictalurus_punctatus
ENSKMAG00000016997	snd1	98	84.676	ENSSTOG00000002140	SND1	100	83.662	Ictidomys_tridecemlineatus
ENSKMAG00000016997	snd1	98	84.787	ENSJJAG00000009561	Snd1	100	83.772	Jaculus_jaculus
ENSKMAG00000016997	snd1	100	95.462	ENSLBEG00000013563	snd1	100	93.963	Labrus_bergylta
ENSKMAG00000016997	snd1	99	88.423	ENSLOCG00000015537	snd1	99	87.595	Lepisosteus_oculatus
ENSKMAG00000016997	snd1	100	84.211	ENSLAFG00000009696	SND1	100	84.211	Loxodonta_africana
ENSKMAG00000016997	snd1	98	85.123	ENSMFAG00000038114	SND1	99	85.102	Macaca_fascicularis
ENSKMAG00000016997	snd1	98	85.123	ENSMMUG00000015432	SND1	100	84.101	Macaca_mulatta
ENSKMAG00000016997	snd1	98	85.123	ENSMNEG00000039808	SND1	100	85.118	Macaca_nemestrina
ENSKMAG00000016997	snd1	98	85.011	ENSMLEG00000029040	SND1	100	85.006	Mandrillus_leucophaeus
ENSKMAG00000016997	snd1	100	95.170	ENSMAMG00000011739	snd1	100	95.170	Mastacembelus_armatus
ENSKMAG00000016997	snd1	100	94.292	ENSMZEG00005005681	snd1	100	94.292	Maylandia_zebra
ENSKMAG00000016997	snd1	98	85.011	ENSMICG00000000097	SND1	100	83.991	Microcebus_murinus
ENSKMAG00000016997	snd1	98	85.011	ENSMOCG00000005040	Snd1	100	83.991	Microtus_ochrogaster
ENSKMAG00000016997	snd1	100	94.512	ENSMMOG00000001795	snd1	100	94.512	Mola_mola
ENSKMAG00000016997	snd1	98	84.340	ENSMODG00000015182	SND1	100	83.333	Monodelphis_domestica
ENSKMAG00000016997	snd1	100	94.951	ENSMALG00000012071	snd1	100	94.951	Monopterus_albus
ENSKMAG00000016997	snd1	98	84.564	MGP_CAROLIEiJ_G0028159	Snd1	99	85.378	Mus_caroli
ENSKMAG00000016997	snd1	98	84.340	ENSMUSG00000001424	Snd1	100	83.224	Mus_musculus
ENSKMAG00000016997	snd1	98	84.564	MGP_PahariEiJ_G0021917	Snd1	100	85.378	Mus_pahari
ENSKMAG00000016997	snd1	98	84.564	MGP_SPRETEiJ_G0029159	Snd1	100	83.443	Mus_spretus
ENSKMAG00000016997	snd1	100	83.882	ENSMPUG00000006545	SND1	100	83.443	Mustela_putorius_furo
ENSKMAG00000016997	snd1	97	83.835	ENSMLUG00000017130	SND1	99	83.166	Myotis_lucifugus
ENSKMAG00000016997	snd1	98	84.676	ENSNGAG00000011186	Snd1	100	83.662	Nannospalax_galili
ENSKMAG00000016997	snd1	100	94.292	ENSNBRG00000006681	snd1	100	94.292	Neolamprologus_brichardi
ENSKMAG00000016997	snd1	100	84.101	ENSNLEG00000012263	SND1	99	86.218	Nomascus_leucogenys
ENSKMAG00000016997	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSKMAG00000016997	snd1	98	84.899	ENSODEG00000011502	SND1	100	83.754	Octodon_degus
ENSKMAG00000016997	snd1	100	94.402	ENSONIG00000011481	snd1	97	94.402	Oreochromis_niloticus
ENSKMAG00000016997	snd1	98	83.933	ENSOANG00000000817	SND1	99	82.637	Ornithorhynchus_anatinus
ENSKMAG00000016997	snd1	100	83.333	ENSOCUG00000001620	SND1	100	83.333	Oryctolagus_cuniculus
ENSKMAG00000016997	snd1	100	94.182	ENSORLG00000015201	snd1	100	94.182	Oryzias_latipes
ENSKMAG00000016997	snd1	100	94.402	ENSORLG00020013991	snd1	100	94.402	Oryzias_latipes_hni
ENSKMAG00000016997	snd1	100	94.402	ENSORLG00015012436	snd1	100	94.402	Oryzias_latipes_hsok
ENSKMAG00000016997	snd1	100	94.731	ENSOMEG00000006406	snd1	100	94.731	Oryzias_melastigma
ENSKMAG00000016997	snd1	98	84.933	ENSOGAG00000013356	SND1	94	83.917	Otolemur_garnettii
ENSKMAG00000016997	snd1	97	82.525	ENSOARG00000002149	SND1	100	82.525	Ovis_aries
ENSKMAG00000016997	snd1	98	85.011	ENSPPAG00000042947	SND1	100	83.991	Pan_paniscus
ENSKMAG00000016997	snd1	100	84.101	ENSPPRG00000004494	SND1	100	84.101	Panthera_pardus
ENSKMAG00000016997	snd1	100	83.991	ENSPTIG00000014214	SND1	100	83.991	Panthera_tigris_altaica
ENSKMAG00000016997	snd1	98	85.011	ENSPTRG00000023911	SND1	100	83.991	Pan_troglodytes
ENSKMAG00000016997	snd1	97	85.102	ENSPANG00000011997	SND1	99	85.102	Papio_anubis
ENSKMAG00000016997	snd1	99	86.842	ENSPKIG00000023494	snd1	99	86.587	Paramormyrops_kingsleyae
ENSKMAG00000016997	snd1	92	93.660	ENSPMGG00000003629	snd1	100	93.660	Periophthalmus_magnuspinnatus
ENSKMAG00000016997	snd1	98	84.787	ENSPEMG00000010240	Snd1	100	83.772	Peromyscus_maniculatus_bairdii
ENSKMAG00000016997	snd1	97	74.492	ENSPMAG00000007915	-	99	74.379	Petromyzon_marinus
ENSKMAG00000016997	snd1	98	84.899	ENSPCIG00000011561	SND1	100	83.882	Phascolarctos_cinereus
ENSKMAG00000016997	snd1	100	96.707	ENSPFOG00000001557	snd1	100	96.707	Poecilia_formosa
ENSKMAG00000016997	snd1	100	96.707	ENSPLAG00000018459	snd1	97	96.707	Poecilia_latipinna
ENSKMAG00000016997	snd1	100	96.926	ENSPMEG00000006803	snd1	100	96.926	Poecilia_mexicana
ENSKMAG00000016997	snd1	100	96.597	ENSPREG00000002189	snd1	100	96.597	Poecilia_reticulata
ENSKMAG00000016997	snd1	91	91.667	ENSPPYG00000017972	SND1	100	91.667	Pongo_abelii
ENSKMAG00000016997	snd1	98	74.832	ENSPCAG00000011305	SND1	100	74.013	Procavia_capensis
ENSKMAG00000016997	snd1	98	85.123	ENSPCOG00000026791	SND1	100	85.118	Propithecus_coquereli
ENSKMAG00000016997	snd1	98	82.886	ENSPVAG00000013945	SND1	100	81.908	Pteropus_vampyrus
ENSKMAG00000016997	snd1	100	94.182	ENSPNYG00000000932	snd1	100	94.182	Pundamilia_nyererei
ENSKMAG00000016997	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSKMAG00000016997	snd1	98	84.452	ENSRNOG00000031173	Snd1	100	83.427	Rattus_norvegicus
ENSKMAG00000016997	snd1	70	88.577	ENSRBIG00000027782	-	93	88.636	Rhinopithecus_bieti
ENSKMAG00000016997	snd1	99	84.129	ENSRROG00000033020	SND1	100	84.101	Rhinopithecus_roxellana
ENSKMAG00000016997	snd1	98	84.899	ENSSBOG00000032461	SND1	100	83.882	Saimiri_boliviensis_boliviensis
ENSKMAG00000016997	snd1	98	81.461	ENSSHAG00000015359	SND1	100	81.461	Sarcophilus_harrisii
ENSKMAG00000016997	snd1	98	88.914	ENSSFOG00015001103	snd1	99	88.344	Scleropages_formosus
ENSKMAG00000016997	snd1	100	94.402	ENSSMAG00000001932	snd1	95	94.402	Scophthalmus_maximus
ENSKMAG00000016997	snd1	100	95.939	ENSSDUG00000002699	snd1	94	95.939	Seriola_dumerili
ENSKMAG00000016997	snd1	100	88.255	ENSSLDG00000001950	snd1	100	88.255	Seriola_lalandi_dorsalis
ENSKMAG00000016997	snd1	86	80.412	ENSSARG00000004877	SND1	92	80.412	Sorex_araneus
ENSKMAG00000016997	snd1	70	80.763	ENSSPUG00000017586	SND1	96	80.763	Sphenodon_punctatus
ENSKMAG00000016997	snd1	73	95.262	ENSSPAG00000021398	snd1	99	95.262	Stegastes_partitus
ENSKMAG00000016997	snd1	98	84.787	ENSSSCG00000016590	SND1	100	83.772	Sus_scrofa
ENSKMAG00000016997	snd1	100	93.792	ENSTRUG00000014067	snd1	100	92.426	Takifugu_rubripes
ENSKMAG00000016997	snd1	100	92.645	ENSTNIG00000011019	snd1	100	92.645	Tetraodon_nigroviridis
ENSKMAG00000016997	snd1	93	79.176	ENSTBEG00000003999	SND1	100	79.176	Tupaia_belangeri
ENSKMAG00000016997	snd1	98	80.537	ENSTTRG00000006059	SND1	100	79.605	Tursiops_truncatus
ENSKMAG00000016997	snd1	87	83.460	ENSUAMG00000005604	-	93	83.460	Ursus_americanus
ENSKMAG00000016997	snd1	69	77.285	ENSUAMG00000002820	-	89	77.285	Ursus_americanus
ENSKMAG00000016997	snd1	100	83.991	ENSUMAG00000005960	SND1	100	83.991	Ursus_maritimus
ENSKMAG00000016997	snd1	73	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSKMAG00000016997	snd1	100	84.211	ENSVVUG00000007226	SND1	100	84.211	Vulpes_vulpes
ENSKMAG00000016997	snd1	97	80.158	ENSXETG00000023043	snd1	100	80.023	Xenopus_tropicalis
ENSKMAG00000016997	snd1	92	94.656	ENSXCOG00000013629	snd1	99	94.656	Xiphophorus_couchianus
ENSKMAG00000016997	snd1	100	97.585	ENSXMAG00000011469	snd1	100	97.585	Xiphophorus_maculatus