EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000017150 (Gene tree)
Gene ID: 108250108
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 26089 bases
Position: chrLWHD01000553.1:70483-96571
Accession: 108250108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023112	MMR_HSR1	PF01926.23	9.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023408	-	1111	XM_017439825	ENSKMAP00000023112	223 (aa)	XP_017295314	UPI0007F8E624

Gene Model

Click here to download ENSKMAG00000017150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000017150	-	78	30.114	ENSKMAG00000012723	rabl2	75	30.114
ENSKMAG00000017150	-	83	32.432	ENSKMAG00000006170	-	82	32.432
ENSKMAG00000017150	-	75	32.143	ENSKMAG00000004945	rab25a	77	32.143
ENSKMAG00000017150	-	81	33.702	ENSKMAG00000001908	rab13	93	33.702
ENSKMAG00000017150	-	76	34.503	ENSKMAG00000004439	rab30	81	34.503
ENSKMAG00000017150	-	57	39.062	ENSKMAG00000021039	si:dkey-13a21.4	53	39.062
ENSKMAG00000017150	-	91	33.005	ENSKMAG00000012657	-	87	33.005
ENSKMAG00000017150	-	85	31.746	ENSKMAG00000006812	RAB7A	88	31.746
ENSKMAG00000017150	-	76	35.057	ENSKMAG00000006810	rab1ba	82	35.057
ENSKMAG00000017150	-	78	35.429	ENSKMAG00000008625	RAB39B	80	35.429
ENSKMAG00000017150	-	57	35.938	ENSKMAG00000006593	rab33a	58	35.938
ENSKMAG00000017150	-	72	31.056	ENSKMAG00000015507	rab6ba	75	31.056
ENSKMAG00000017150	-	70	31.410	ENSKMAG00000011278	rab6bb	75	31.410
ENSKMAG00000017150	-	83	33.508	ENSKMAG00000007364	rab18b	91	33.508
ENSKMAG00000017150	-	76	34.706	ENSKMAG00000018973	-	74	34.706
ENSKMAG00000017150	-	87	32.474	ENSKMAG00000017662	rab9a	96	32.474
ENSKMAG00000017150	-	71	38.509	ENSKMAG00000003105	rab33ba	66	38.509
ENSKMAG00000017150	-	75	35.119	ENSKMAG00000020056	rab12	83	34.314
ENSKMAG00000017150	-	75	36.686	ENSKMAG00000020392	rab15	77	36.686
ENSKMAG00000017150	-	75	33.728	ENSKMAG00000009799	rab2a	77	33.728
ENSKMAG00000017150	-	60	37.313	ENSKMAG00000019341	rab34b	51	37.313
ENSKMAG00000017150	-	76	34.503	ENSKMAG00000020250	rab4a	77	34.503
ENSKMAG00000017150	-	76	36.095	ENSKMAG00000014038	-	78	36.095
ENSKMAG00000017150	-	76	35.882	ENSKMAG00000007267	rab42a	76	35.882
ENSKMAG00000017150	-	76	36.095	ENSKMAG00000009856	zgc:171927	77	36.095
ENSKMAG00000017150	-	84	30.052	ENSKMAG00000002545	-	88	30.052
ENSKMAG00000017150	-	75	32.143	ENSKMAG00000015488	rab25b	78	32.143
ENSKMAG00000017150	-	85	33.684	ENSKMAG00000011905	rab11a	85	33.684
ENSKMAG00000017150	-	78	35.795	ENSKMAG00000003494	si:dkey-16l2.16	93	34.804
ENSKMAG00000017150	-	75	34.320	ENSKMAG00000017487	rab14	76	34.320
ENSKMAG00000017150	-	74	33.533	ENSKMAG00000005111	rab5aa	75	33.533
ENSKMAG00000017150	-	52	34.188	ENSKMAG00000017893	mras	77	32.335
ENSKMAG00000017150	-	78	37.356	ENSKMAG00000006854	rab35b	83	37.356
ENSKMAG00000017150	-	74	32.934	ENSKMAG00000020038	rab5c	73	32.934
ENSKMAG00000017150	-	76	35.795	ENSKMAG00000020034	-	58	36.000
ENSKMAG00000017150	-	76	36.471	ENSKMAG00000017357	rab1ab	81	36.471
ENSKMAG00000017150	-	77	32.000	ENSKMAG00000014705	rab22a	86	32.000
ENSKMAG00000017150	-	74	38.235	ENSKMAG00000002862	zgc:101559	70	38.235
ENSKMAG00000017150	-	70	36.129	ENSKMAG00000018270	rab23	70	37.059
ENSKMAG00000017150	-	55	30.328	ENSKMAG00000002898	arl8a	61	30.328
ENSKMAG00000017150	-	75	31.844	ENSKMAG00000017097	rasl11a	70	31.667
ENSKMAG00000017150	-	78	33.526	ENSKMAG00000001191	RAB15	80	33.526
ENSKMAG00000017150	-	72	30.000	ENSKMAG00000001922	Ha-ras	87	31.579
ENSKMAG00000017150	-	78	32.955	ENSKMAG00000015516	rab11al	79	32.955
ENSKMAG00000017150	-	75	34.911	ENSKMAG00000011301	-	76	34.911
ENSKMAG00000017150	-	78	31.429	ENSKMAG00000020733	rras	86	30.460
ENSKMAG00000017150	-	75	35.119	ENSKMAG00000019964	rab9b	83	35.119
ENSKMAG00000017150	-	78	34.857	ENSKMAG00000003646	-	87	34.857
ENSKMAG00000017150	-	85	31.746	ENSKMAG00000020013	-	88	31.746
ENSKMAG00000017150	-	76	32.749	ENSKMAG00000012778	si:dkey-34d22.5	76	32.749
ENSKMAG00000017150	-	83	32.432	ENSKMAG00000009033	rab11bb	82	32.432
ENSKMAG00000017150	-	74	31.737	ENSKMAG00000017417	-	73	31.737
ENSKMAG00000017150	-	78	33.523	ENSKMAG00000006082	-	78	33.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017150	-	88	75.510	ENSATEG00000024739	RAB29	95	75.510	Anabas_testudineus
ENSKMAG00000017150	-	74	83.030	ENSACLG00000008602	RAB29	100	83.030	Astatotilapia_calliptera
ENSKMAG00000017150	-	91	68.473	ENSCVAG00000014038	RAB29	99	68.473	Cyprinodon_variegatus
ENSKMAG00000017150	-	75	54.762	ENSEBUG00000002259	RAB29	81	54.762	Eptatretus_burgeri
ENSKMAG00000017150	-	74	73.171	ENSFHEG00000015993	RAB29	80	73.171	Fundulus_heteroclitus
ENSKMAG00000017150	-	74	69.512	ENSGMOG00000018475	RAB29	99	69.512	Gadus_morhua
ENSKMAG00000017150	-	88	70.918	ENSGAFG00000000629	RAB29	95	70.918	Gambusia_affinis
ENSKMAG00000017150	-	90	71.500	ENSGACG00000010473	RAB29	97	71.500	Gasterosteus_aculeatus
ENSKMAG00000017150	-	89	78.894	ENSHBUG00000012594	RAB29	95	78.894	Haplochromis_burtoni
ENSKMAG00000017150	-	91	70.443	ENSLBEG00000018812	RAB29	99	70.443	Labrus_bergylta
ENSKMAG00000017150	-	91	70.443	ENSLBEG00000006152	-	99	70.443	Labrus_bergylta
ENSKMAG00000017150	-	76	55.882	ENSLACG00000002523	RAB29	83	55.882	Latimeria_chalumnae
ENSKMAG00000017150	-	88	72.449	ENSMAMG00000006963	RAB29	96	72.449	Mastacembelus_armatus
ENSKMAG00000017150	-	91	77.184	ENSMZEG00005026799	RAB29	99	77.184	Maylandia_zebra
ENSKMAG00000017150	-	87	74.227	ENSMALG00000018436	RAB29	85	74.227	Monopterus_albus
ENSKMAG00000017150	-	84	70.984	ENSNBRG00000008714	RAB29	85	70.984	Neolamprologus_brichardi
ENSKMAG00000017150	-	91	76.699	ENSONIG00000014892	RAB29	99	76.699	Oreochromis_niloticus
ENSKMAG00000017150	-	91	70.443	ENSORLG00000027892	RAB29	99	70.443	Oryzias_latipes
ENSKMAG00000017150	-	91	68.966	ENSORLG00020005240	RAB29	99	68.966	Oryzias_latipes_hni
ENSKMAG00000017150	-	91	69.458	ENSORLG00015020441	-	99	69.458	Oryzias_latipes_hsok
ENSKMAG00000017150	-	90	72.637	ENSOMEG00000000336	RAB29	99	72.637	Oryzias_melastigma
ENSKMAG00000017150	-	87	64.948	ENSPMGG00000008290	-	97	64.948	Periophthalmus_magnuspinnatus
ENSKMAG00000017150	-	91	67.980	ENSPFOG00000013066	RAB29	98	67.980	Poecilia_formosa
ENSKMAG00000017150	-	88	68.367	ENSPLAG00000002600	RAB29	92	68.367	Poecilia_latipinna
ENSKMAG00000017150	-	91	68.473	ENSPMEG00000021807	RAB29	99	68.473	Poecilia_mexicana
ENSKMAG00000017150	-	91	69.458	ENSPREG00000020276	RAB29	99	69.458	Poecilia_reticulata
ENSKMAG00000017150	-	91	77.184	ENSPNYG00000015355	RAB29	99	77.184	Pundamilia_nyererei
ENSKMAG00000017150	-	91	70.936	ENSSDUG00000006543	RAB29	97	70.936	Seriola_dumerili
ENSKMAG00000017150	-	80	53.371	ENSSPUG00000015007	RAB29	87	53.371	Sphenodon_punctatus
ENSKMAG00000017150	-	89	70.854	ENSSPAG00000002062	RAB29	97	70.854	Stegastes_partitus
ENSKMAG00000017150	-	90	72.500	ENSXCOG00000016370	RAB29	97	72.500	Xiphophorus_couchianus
ENSKMAG00000017150	-	90	72.500	ENSXMAG00000029823	RAB29	97	72.500	Xiphophorus_maculatus