EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017216 (Gene tree)
Gene ID: 108233440
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 20021 bases
Position: chrLWHD01000021.1:1129009-1149029
Accession: 108233440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	1	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	2	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	3	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	4	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	5	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	6	7
ENSKMAP00000023299	PUF	PF00806.19	5.6e-69	7	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	1	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	2	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	3	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	4	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	5	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	6	7
ENSKMAP00000023267	PUF	PF00806.19	5.8e-67	7	7
ENSKMAP00000023338	PUF	PF00806.19	1.2e-54	1	5
ENSKMAP00000023338	PUF	PF00806.19	1.2e-54	2	5
ENSKMAP00000023338	PUF	PF00806.19	1.2e-54	3	5
ENSKMAP00000023338	PUF	PF00806.19	1.2e-54	4	5
ENSKMAP00000023338	PUF	PF00806.19	1.2e-54	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023596	-	6294	XM_017411907	ENSKMAP00000023299	1186 (aa)	XP_017267396	-
ENSKMAT00000023562	-	6366	XM_017411904	ENSKMAP00000023267	1210 (aa)	XP_017267393	UPI0007F8C641
ENSKMAT00000023635	-	2880	-	ENSKMAP00000023338	959 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000017216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017216	pum2	82	85.371	ENSG00000055917	PUM2	100	76.471	Homo_sapiens
ENSKMAG00000017216	pum2	100	86.847	ENSAPOG00000015756	pum2	100	85.972	Acanthochromis_polyacanthus
ENSKMAG00000017216	pum2	90	75.576	ENSAMEG00000002823	PUM2	100	73.155	Ailuropoda_melanoleuca
ENSKMAG00000017216	pum2	90	99.580	ENSACIG00000010646	pum2	96	99.580	Amphilophus_citrinellus
ENSKMAG00000017216	pum2	99	93.019	ENSAOCG00000016619	pum2	99	93.607	Amphiprion_ocellaris
ENSKMAG00000017216	pum2	100	95.967	ENSAPEG00000019924	pum2	100	95.967	Amphiprion_percula
ENSKMAG00000017216	pum2	100	94.486	ENSATEG00000015030	pum2	100	94.403	Anabas_testudineus
ENSKMAG00000017216	pum2	100	72.525	ENSAPLG00000010496	PUM2	100	70.423	Anas_platyrhynchos
ENSKMAG00000017216	pum2	90	74.354	ENSACAG00000010491	PUM2	100	71.797	Anolis_carolinensis
ENSKMAG00000017216	pum2	87	85.371	ENSANAG00000021807	PUM2	100	72.468	Aotus_nancymaae
ENSKMAG00000017216	pum2	100	93.997	ENSACLG00000022532	pum2	100	94.408	Astatotilapia_calliptera
ENSKMAG00000017216	pum2	100	70.758	ENSBTAG00000011155	PUM2	99	78.207	Bos_taurus
ENSKMAG00000017216	pum2	87	85.371	ENSCJAG00000007450	PUM2	100	72.376	Callithrix_jacchus
ENSKMAG00000017216	pum2	90	75.115	ENSCAFG00000003839	PUM2	100	72.946	Canis_familiaris
ENSKMAG00000017216	pum2	99	73.222	ENSCAFG00020025689	PUM2	96	80.779	Canis_lupus_dingo
ENSKMAG00000017216	pum2	100	71.013	ENSCHIG00000022180	PUM2	100	72.946	Capra_hircus
ENSKMAG00000017216	pum2	99	70.677	ENSTSYG00000014463	PUM2	100	72.509	Carlito_syrichta
ENSKMAG00000017216	pum2	81	87.751	ENSCAPG00000016888	PUM2	99	85.201	Cavia_aperea
ENSKMAG00000017216	pum2	100	73.529	ENSCPOG00000031996	PUM2	100	81.174	Cavia_porcellus
ENSKMAG00000017216	pum2	82	85.371	ENSCCAG00000037035	PUM2	100	72.468	Cebus_capucinus
ENSKMAG00000017216	pum2	100	73.529	ENSCATG00000043826	PUM2	100	81.174	Cercocebus_atys
ENSKMAG00000017216	pum2	100	73.529	ENSCLAG00000006048	PUM2	100	81.174	Chinchilla_lanigera
ENSKMAG00000017216	pum2	90	76.059	ENSCSAG00000008087	PUM2	100	72.560	Chlorocebus_sabaeus
ENSKMAG00000017216	pum2	64	74.884	ENSCHOG00000004575	PUM2	79	79.562	Choloepus_hoffmanni
ENSKMAG00000017216	pum2	100	70.659	ENSCPBG00000019966	PUM2	100	68.263	Chrysemys_picta_bellii
ENSKMAG00000017216	pum2	82	85.371	ENSCANG00000032797	PUM2	100	72.652	Colobus_angolensis_palliatus
ENSKMAG00000017216	pum2	87	85.371	ENSCGRG00001025023	Pum2	100	81.418	Cricetulus_griseus_chok1gshd
ENSKMAG00000017216	pum2	87	85.371	ENSCGRG00000001580	Pum2	100	81.418	Cricetulus_griseus_crigri
ENSKMAG00000017216	pum2	100	91.928	ENSCSEG00000020899	pum2	100	91.351	Cynoglossus_semilaevis
ENSKMAG00000017216	pum2	100	93.586	ENSCVAG00000002426	pum2	100	93.092	Cyprinodon_variegatus
ENSKMAG00000017216	pum2	100	86.421	ENSDARG00000061040	pum2	100	85.678	Danio_rerio
ENSKMAG00000017216	pum2	96	66.912	ENSDNOG00000006733	PUM2	100	69.991	Dasypus_novemcinctus
ENSKMAG00000017216	pum2	96	72.594	ENSDORG00000011453	Pum2	100	80.292	Dipodomys_ordii
ENSKMAG00000017216	pum2	81	89.680	ENSETEG00000017683	PUM2	79	90.391	Echinops_telfairi
ENSKMAG00000017216	pum2	85	60.641	ENSEBUG00000004435	pum2	96	58.341	Eptatretus_burgeri
ENSKMAG00000017216	pum2	67	60.776	ENSEBUG00000014828	pum2	92	59.774	Eptatretus_burgeri
ENSKMAG00000017216	pum2	83	90.821	ENSEASG00005009429	PUM2	96	90.754	Equus_asinus_asinus
ENSKMAG00000017216	pum2	83	90.821	ENSECAG00000021930	PUM2	96	90.754	Equus_caballus
ENSKMAG00000017216	pum2	71	69.811	ENSEEUG00000003224	-	74	69.811	Erinaceus_europaeus
ENSKMAG00000017216	pum2	100	86.928	ENSELUG00000014997	pum2	100	87.031	Esox_lucius
ENSKMAG00000017216	pum2	90	75.023	ENSFCAG00000027520	PUM2	100	72.853	Felis_catus
ENSKMAG00000017216	pum2	90	75.461	ENSFALG00000001759	PUM2	100	79.321	Ficedula_albicollis
ENSKMAG00000017216	pum2	100	73.109	ENSFDAG00000019685	PUM2	100	80.685	Fukomys_damarensis
ENSKMAG00000017216	pum2	100	92.723	ENSFHEG00000021596	pum2	100	90.931	Fundulus_heteroclitus
ENSKMAG00000017216	pum2	90	85.741	ENSGMOG00000006903	pum2	100	86.111	Gadus_morhua
ENSKMAG00000017216	pum2	79	90.268	ENSGALG00000016481	PUM2	92	90.268	Gallus_gallus
ENSKMAG00000017216	pum2	100	94.321	ENSGAFG00000013691	pum2	100	93.827	Gambusia_affinis
ENSKMAG00000017216	pum2	90	91.333	ENSGACG00000009670	pum2	100	91.240	Gasterosteus_aculeatus
ENSKMAG00000017216	pum2	100	72.966	ENSGAGG00000020698	PUM2	100	72.535	Gopherus_agassizii
ENSKMAG00000017216	pum2	82	85.371	ENSGGOG00000011374	PUM2	100	72.468	Gorilla_gorilla
ENSKMAG00000017216	pum2	100	94.515	ENSHBUG00000016453	pum2	100	85.894	Haplochromis_burtoni
ENSKMAG00000017216	pum2	100	71.357	ENSHGLG00000007892	PUM2	100	72.099	Heterocephalus_glaber_female
ENSKMAG00000017216	pum2	90	75.599	ENSHGLG00100015510	PUM2	100	72.769	Heterocephalus_glaber_male
ENSKMAG00000017216	pum2	100	91.611	ENSHCOG00000010119	pum2	100	91.862	Hippocampus_comes
ENSKMAG00000017216	pum2	100	71.229	ENSSTOG00000006262	PUM2	100	73.088	Ictidomys_tridecemlineatus
ENSKMAG00000017216	pum2	100	71.643	ENSJJAG00000020969	Pum2	100	73.597	Jaculus_jaculus
ENSKMAG00000017216	pum2	100	93.493	ENSLBEG00000020488	pum2	100	92.834	Labrus_bergylta
ENSKMAG00000017216	pum2	100	73.659	ENSLACG00000008723	PUM2	100	72.571	Latimeria_chalumnae
ENSKMAG00000017216	pum2	100	76.689	ENSLOCG00000017196	pum2	100	75.021	Lepisosteus_oculatus
ENSKMAG00000017216	pum2	90	75.322	ENSLAFG00000009278	PUM2	100	80.292	Loxodonta_africana
ENSKMAG00000017216	pum2	82	85.371	ENSMFAG00000000492	PUM2	100	72.560	Macaca_fascicularis
ENSKMAG00000017216	pum2	100	73.529	ENSMMUG00000023181	PUM2	100	81.174	Macaca_mulatta
ENSKMAG00000017216	pum2	87	85.371	ENSMNEG00000039659	PUM2	100	72.560	Macaca_nemestrina
ENSKMAG00000017216	pum2	82	85.371	ENSMLEG00000039243	PUM2	100	72.560	Mandrillus_leucophaeus
ENSKMAG00000017216	pum2	100	94.239	ENSMAMG00000006121	pum2	100	93.663	Mastacembelus_armatus
ENSKMAG00000017216	pum2	100	93.997	ENSMZEG00005000791	pum2	100	94.408	Maylandia_zebra
ENSKMAG00000017216	pum2	90	75.185	ENSMGAG00000014040	PUM2	100	72.417	Meleagris_gallopavo
ENSKMAG00000017216	pum2	90	76.037	ENSMAUG00000000311	Pum2	100	80.779	Mesocricetus_auratus
ENSKMAG00000017216	pum2	82	85.371	ENSMICG00000011647	PUM2	100	72.928	Microcebus_murinus
ENSKMAG00000017216	pum2	90	75.760	ENSMOCG00000013663	Pum2	100	73.063	Microtus_ochrogaster
ENSKMAG00000017216	pum2	90	90.741	ENSMMOG00000002975	pum2	100	91.103	Mola_mola
ENSKMAG00000017216	pum2	96	71.608	ENSMODG00000009811	PUM2	100	78.102	Monodelphis_domestica
ENSKMAG00000017216	pum2	100	86.506	ENSMALG00000022313	pum2	100	84.894	Monopterus_albus
ENSKMAG00000017216	pum2	100	73.529	MGP_CAROLIEiJ_G0017603	Pum2	100	81.174	Mus_caroli
ENSKMAG00000017216	pum2	100	73.529	ENSMUSG00000020594	Pum2	100	81.174	Mus_musculus
ENSKMAG00000017216	pum2	100	71.944	MGP_PahariEiJ_G0029361	Pum2	99	76.046	Mus_pahari
ENSKMAG00000017216	pum2	100	73.529	MGP_SPRETEiJ_G0018447	Pum2	100	81.174	Mus_spretus
ENSKMAG00000017216	pum2	90	75.207	ENSMPUG00000013734	PUM2	100	73.038	Mustela_putorius_furo
ENSKMAG00000017216	pum2	90	74.701	ENSMLUG00000007362	PUM2	100	72.442	Myotis_lucifugus
ENSKMAG00000017216	pum2	90	76.313	ENSNGAG00000016665	-	100	73.247	Nannospalax_galili
ENSKMAG00000017216	pum2	90	53.903	ENSNGAG00000016239	-	99	51.015	Nannospalax_galili
ENSKMAG00000017216	pum2	100	87.992	ENSNBRG00000020737	pum2	100	87.992	Neolamprologus_brichardi
ENSKMAG00000017216	pum2	100	73.529	ENSNLEG00000002509	PUM2	100	81.174	Nomascus_leucogenys
ENSKMAG00000017216	pum2	84	72.601	ENSMEUG00000016567	PUM2	100	68.246	Notamacropus_eugenii
ENSKMAG00000017216	pum2	68	69.231	ENSOPRG00000001963	PUM2	93	59.199	Ochotona_princeps
ENSKMAG00000017216	pum2	100	71.116	ENSODEG00000007823	PUM2	100	72.903	Octodon_degus
ENSKMAG00000017216	pum2	100	94.044	ENSONIG00000006119	pum2	100	94.715	Oreochromis_niloticus
ENSKMAG00000017216	pum2	90	75.691	ENSOCUG00000017908	PUM2	100	72.309	Oryctolagus_cuniculus
ENSKMAG00000017216	pum2	100	90.594	ENSORLG00000012611	pum2	100	90.677	Oryzias_latipes
ENSKMAG00000017216	pum2	100	90.594	ENSORLG00020014452	pum2	100	90.677	Oryzias_latipes_hni
ENSKMAG00000017216	pum2	100	90.512	ENSORLG00015009427	pum2	100	90.594	Oryzias_latipes_hsok
ENSKMAG00000017216	pum2	94	84.722	ENSOMEG00000005889	pum2	100	84.402	Oryzias_melastigma
ENSKMAG00000017216	pum2	85	85.817	ENSOGAG00000002187	PUM2	100	69.127	Otolemur_garnettii
ENSKMAG00000017216	pum2	90	74.977	ENSOARG00000017236	PUM2	100	72.811	Ovis_aries
ENSKMAG00000017216	pum2	82	85.371	ENSPPAG00000023095	PUM2	99	81.421	Pan_paniscus
ENSKMAG00000017216	pum2	90	75.023	ENSPPRG00000021443	PUM2	100	72.931	Panthera_pardus
ENSKMAG00000017216	pum2	90	75.023	ENSPTIG00000018982	PUM2	100	72.853	Panthera_tigris_altaica
ENSKMAG00000017216	pum2	82	85.371	ENSPTRG00000011692	PUM2	100	72.468	Pan_troglodytes
ENSKMAG00000017216	pum2	94	65.233	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSKMAG00000017216	pum2	100	68.603	ENSPKIG00000023195	pum2	100	68.405	Paramormyrops_kingsleyae
ENSKMAG00000017216	pum2	100	73.624	ENSPSIG00000011626	PUM2	99	71.100	Pelodiscus_sinensis
ENSKMAG00000017216	pum2	100	85.541	ENSPMGG00000016123	pum2	100	85.137	Periophthalmus_magnuspinnatus
ENSKMAG00000017216	pum2	90	75.738	ENSPEMG00000008357	Pum2	100	80.779	Peromyscus_maniculatus_bairdii
ENSKMAG00000017216	pum2	100	74.038	ENSPMAG00000007038	pum2	90	74.092	Petromyzon_marinus
ENSKMAG00000017216	pum2	100	94.403	ENSPFOG00000019208	pum2	100	93.909	Poecilia_formosa
ENSKMAG00000017216	pum2	100	94.486	ENSPLAG00000001826	pum2	100	93.992	Poecilia_latipinna
ENSKMAG00000017216	pum2	100	94.403	ENSPMEG00000015766	pum2	100	94.050	Poecilia_mexicana
ENSKMAG00000017216	pum2	100	90.404	ENSPREG00000006905	pum2	100	89.798	Poecilia_reticulata
ENSKMAG00000017216	pum2	90	76.129	ENSPPYG00000012617	PUM2	100	72.560	Pongo_abelii
ENSKMAG00000017216	pum2	78	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSKMAG00000017216	pum2	99	71.457	ENSPCOG00000019636	PUM2	100	72.948	Propithecus_coquereli
ENSKMAG00000017216	pum2	88	70.131	ENSPVAG00000002920	PUM2	100	67.854	Pteropus_vampyrus
ENSKMAG00000017216	pum2	100	93.914	ENSPNYG00000022901	pum2	100	94.326	Pundamilia_nyererei
ENSKMAG00000017216	pum2	98	88.095	ENSPNAG00000008025	pum2	99	88.010	Pygocentrus_nattereri
ENSKMAG00000017216	pum2	100	74.153	ENSRNOG00000006180	Pum2	100	80.685	Rattus_norvegicus
ENSKMAG00000017216	pum2	87	85.371	ENSRBIG00000044880	PUM2	100	72.718	Rhinopithecus_bieti
ENSKMAG00000017216	pum2	82	85.371	ENSSBOG00000022007	PUM2	100	72.560	Saimiri_boliviensis_boliviensis
ENSKMAG00000017216	pum2	91	78.320	ENSSFOG00015003476	pum2	100	76.687	Scleropages_formosus
ENSKMAG00000017216	pum2	100	92.270	ENSSMAG00000018236	pum2	100	92.763	Scophthalmus_maximus
ENSKMAG00000017216	pum2	97	90.714	ENSSDUG00000001800	pum2	100	91.650	Seriola_dumerili
ENSKMAG00000017216	pum2	100	94.646	ENSSLDG00000000981	pum2	100	94.646	Seriola_lalandi_dorsalis
ENSKMAG00000017216	pum2	96	57.877	ENSSARG00000010992	PUM2	86	65.611	Sorex_araneus
ENSKMAG00000017216	pum2	89	74.837	ENSSPUG00000017012	PUM2	99	72.719	Sphenodon_punctatus
ENSKMAG00000017216	pum2	100	95.967	ENSSPAG00000022948	pum2	100	95.967	Stegastes_partitus
ENSKMAG00000017216	pum2	95	81.311	ENSSSCG00000008600	PUM2	100	81.174	Sus_scrofa
ENSKMAG00000017216	pum2	90	75.369	ENSTGUG00000013149	PUM2	100	72.627	Taeniopygia_guttata
ENSKMAG00000017216	pum2	100	87.573	ENSTRUG00000018167	pum2	100	87.011	Takifugu_rubripes
ENSKMAG00000017216	pum2	100	90.552	ENSTNIG00000003116	pum2	100	90.301	Tetraodon_nigroviridis
ENSKMAG00000017216	pum2	70	88.889	ENSTBEG00000008729	PUM2	76	85.863	Tupaia_belangeri
ENSKMAG00000017216	pum2	90	75.023	ENSTTRG00000004887	PUM2	100	72.669	Tursiops_truncatus
ENSKMAG00000017216	pum2	64	79.510	ENSUAMG00000008120	PUM2	97	76.486	Ursus_americanus
ENSKMAG00000017216	pum2	100	70.858	ENSUMAG00000023198	PUM2	100	73.038	Ursus_maritimus
ENSKMAG00000017216	pum2	90	75.161	ENSVPAG00000005056	PUM2	100	72.719	Vicugna_pacos
ENSKMAG00000017216	pum2	100	70.858	ENSVVUG00000014829	PUM2	100	73.038	Vulpes_vulpes
ENSKMAG00000017216	pum2	100	69.383	ENSXETG00000008903	pum2	100	67.298	Xenopus_tropicalis
ENSKMAG00000017216	pum2	97	91.429	ENSXCOG00000002556	pum2	100	91.429	Xiphophorus_couchianus
ENSKMAG00000017216	pum2	100	94.486	ENSXMAG00000017682	pum2	100	93.992	Xiphophorus_maculatus