EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017287 (Gene tree)
Gene ID: 108236101
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 1486 bases
Position: chrLWHD01000038.1:3299754-3301239
Accession: 108236101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023302	PseudoU_synth_2	PF00849.22	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023599	-	918	XM_017416552	ENSKMAP00000023302	305 (aa)	XP_017272041	-

Gene Model

Click here to download ENSKMAG00000017287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017287	rpusd1	98	56.066	ENSG00000007376	RPUSD1	99	66.467	Homo_sapiens
ENSKMAG00000017287	rpusd1	100	78.827	ENSAPOG00000022221	rpusd1	100	78.827	Acanthochromis_polyacanthus
ENSKMAG00000017287	rpusd1	98	58.667	ENSAMEG00000007461	RPUSD1	98	58.667	Ailuropoda_melanoleuca
ENSKMAG00000017287	rpusd1	100	77.492	ENSACIG00000015863	rpusd1	100	77.492	Amphilophus_citrinellus
ENSKMAG00000017287	rpusd1	100	80.645	ENSAOCG00000021975	rpusd1	97	80.645	Amphiprion_ocellaris
ENSKMAG00000017287	rpusd1	100	80.968	ENSAPEG00000001316	rpusd1	97	80.968	Amphiprion_percula
ENSKMAG00000017287	rpusd1	100	79.032	ENSATEG00000002984	rpusd1	100	79.032	Anabas_testudineus
ENSKMAG00000017287	rpusd1	77	59.916	ENSAPLG00000012316	RPUSD1	98	59.072	Anas_platyrhynchos
ENSKMAG00000017287	rpusd1	98	65.232	ENSACAG00000008953	RPUSD1	99	65.232	Anolis_carolinensis
ENSKMAG00000017287	rpusd1	98	55.844	ENSANAG00000024709	RPUSD1	98	55.738	Aotus_nancymaae
ENSKMAG00000017287	rpusd1	100	78.205	ENSACLG00000013692	rpusd1	100	78.205	Astatotilapia_calliptera
ENSKMAG00000017287	rpusd1	98	67.785	ENSAMXG00000019802	rpusd1	99	68.000	Astyanax_mexicanus
ENSKMAG00000017287	rpusd1	98	59.468	ENSBTAG00000000179	RPUSD1	98	59.801	Bos_taurus
ENSKMAG00000017287	rpusd1	98	55.882	ENSCJAG00000012253	RPUSD1	98	55.082	Callithrix_jacchus
ENSKMAG00000017287	rpusd1	98	56.667	ENSCAFG00000019614	RPUSD1	98	57.000	Canis_familiaris
ENSKMAG00000017287	rpusd1	98	56.667	ENSCAFG00020008891	RPUSD1	98	57.000	Canis_lupus_dingo
ENSKMAG00000017287	rpusd1	98	60.133	ENSCHIG00000012872	RPUSD1	98	60.465	Capra_hircus
ENSKMAG00000017287	rpusd1	98	56.000	ENSTSYG00000036934	RPUSD1	98	56.000	Carlito_syrichta
ENSKMAG00000017287	rpusd1	98	56.623	ENSCAPG00000014219	RPUSD1	98	56.000	Cavia_aperea
ENSKMAG00000017287	rpusd1	98	56.623	ENSCPOG00000034604	RPUSD1	98	56.000	Cavia_porcellus
ENSKMAG00000017287	rpusd1	98	56.169	ENSCCAG00000034385	RPUSD1	98	56.066	Cebus_capucinus
ENSKMAG00000017287	rpusd1	98	56.066	ENSCATG00000042983	RPUSD1	98	56.066	Cercocebus_atys
ENSKMAG00000017287	rpusd1	98	54.902	ENSCLAG00000013966	RPUSD1	83	62.451	Chinchilla_lanigera
ENSKMAG00000017287	rpusd1	98	55.410	ENSCSAG00000012121	RPUSD1	98	55.700	Chlorocebus_sabaeus
ENSKMAG00000017287	rpusd1	98	61.333	ENSCPBG00000021101	RPUSD1	99	61.333	Chrysemys_picta_bellii
ENSKMAG00000017287	rpusd1	86	60.755	ENSCANG00000028576	RPUSD1	90	62.846	Colobus_angolensis_palliatus
ENSKMAG00000017287	rpusd1	98	56.478	ENSCGRG00001014253	Rpusd1	98	56.478	Cricetulus_griseus_chok1gshd
ENSKMAG00000017287	rpusd1	98	56.478	ENSCGRG00000017995	Rpusd1	98	56.478	Cricetulus_griseus_crigri
ENSKMAG00000017287	rpusd1	99	75.415	ENSCSEG00000018512	rpusd1	99	75.415	Cynoglossus_semilaevis
ENSKMAG00000017287	rpusd1	99	85.809	ENSCVAG00000022746	rpusd1	99	85.809	Cyprinodon_variegatus
ENSKMAG00000017287	rpusd1	98	68.896	ENSDARG00000060192	rpusd1	99	68.896	Danio_rerio
ENSKMAG00000017287	rpusd1	98	55.082	ENSDNOG00000003721	RPUSD1	98	55.082	Dasypus_novemcinctus
ENSKMAG00000017287	rpusd1	98	56.333	ENSDORG00000026656	Rpusd1	98	56.333	Dipodomys_ordii
ENSKMAG00000017287	rpusd1	96	47.078	ENSEBUG00000008767	rpusd1	92	47.078	Eptatretus_burgeri
ENSKMAG00000017287	rpusd1	98	56.958	ENSEASG00005018421	RPUSD1	74	55.911	Equus_asinus_asinus
ENSKMAG00000017287	rpusd1	99	69.677	ENSELUG00000014307	rpusd1	89	69.508	Esox_lucius
ENSKMAG00000017287	rpusd1	96	57.770	ENSFCAG00000010359	RPUSD1	96	57.770	Felis_catus
ENSKMAG00000017287	rpusd1	98	64.214	ENSFALG00000003211	RPUSD1	99	64.214	Ficedula_albicollis
ENSKMAG00000017287	rpusd1	98	57.000	ENSFDAG00000013398	RPUSD1	98	57.000	Fukomys_damarensis
ENSKMAG00000017287	rpusd1	99	82.680	ENSFHEG00000004736	rpusd1	99	84.641	Fundulus_heteroclitus
ENSKMAG00000017287	rpusd1	99	70.455	ENSGMOG00000010756	rpusd1	100	70.779	Gadus_morhua
ENSKMAG00000017287	rpusd1	98	63.455	ENSGALG00000005315	RPUSD1	99	63.667	Gallus_gallus
ENSKMAG00000017287	rpusd1	99	85.149	ENSGAFG00000009886	rpusd1	99	85.149	Gambusia_affinis
ENSKMAG00000017287	rpusd1	99	78.571	ENSGACG00000014276	rpusd1	99	78.571	Gasterosteus_aculeatus
ENSKMAG00000017287	rpusd1	98	61.333	ENSGAGG00000004181	RPUSD1	99	61.333	Gopherus_agassizii
ENSKMAG00000017287	rpusd1	98	56.863	ENSGGOG00000013997	RPUSD1	98	56.494	Gorilla_gorilla
ENSKMAG00000017287	rpusd1	100	78.526	ENSHBUG00000023728	rpusd1	100	78.526	Haplochromis_burtoni
ENSKMAG00000017287	rpusd1	98	55.629	ENSHGLG00000002595	RPUSD1	98	55.116	Heterocephalus_glaber_female
ENSKMAG00000017287	rpusd1	98	55.629	ENSHGLG00100014303	RPUSD1	98	55.116	Heterocephalus_glaber_male
ENSKMAG00000017287	rpusd1	99	73.856	ENSHCOG00000002390	rpusd1	99	72.787	Hippocampus_comes
ENSKMAG00000017287	rpusd1	98	65.217	ENSIPUG00000001570	rpusd1	98	65.436	Ictalurus_punctatus
ENSKMAG00000017287	rpusd1	98	57.000	ENSSTOG00000004276	RPUSD1	98	57.000	Ictidomys_tridecemlineatus
ENSKMAG00000017287	rpusd1	98	56.333	ENSJJAG00000015696	Rpusd1	98	56.333	Jaculus_jaculus
ENSKMAG00000017287	rpusd1	100	78.065	ENSLBEG00000013354	RPUSD1	100	78.065	Labrus_bergylta
ENSKMAG00000017287	rpusd1	100	78.065	ENSLBEG00000022502	rpusd1	100	78.065	Labrus_bergylta
ENSKMAG00000017287	rpusd1	98	61.513	ENSLACG00000008869	RPUSD1	99	61.716	Latimeria_chalumnae
ENSKMAG00000017287	rpusd1	71	78.802	ENSLOCG00000005682	rpusd1	100	78.802	Lepisosteus_oculatus
ENSKMAG00000017287	rpusd1	98	56.667	ENSLAFG00000002115	RPUSD1	98	56.667	Loxodonta_africana
ENSKMAG00000017287	rpusd1	98	56.066	ENSMFAG00000003961	RPUSD1	98	55.700	Macaca_fascicularis
ENSKMAG00000017287	rpusd1	98	56.066	ENSMMUG00000000842	RPUSD1	98	55.700	Macaca_mulatta
ENSKMAG00000017287	rpusd1	98	56.066	ENSMNEG00000042712	RPUSD1	98	55.700	Macaca_nemestrina
ENSKMAG00000017287	rpusd1	98	56.066	ENSMLEG00000030591	RPUSD1	98	55.700	Mandrillus_leucophaeus
ENSKMAG00000017287	rpusd1	100	81.029	ENSMAMG00000004735	rpusd1	100	80.707	Mastacembelus_armatus
ENSKMAG00000017287	rpusd1	100	78.205	ENSMZEG00005003214	rpusd1	100	78.205	Maylandia_zebra
ENSKMAG00000017287	rpusd1	97	62.963	ENSMGAG00000005447	RPUSD1	99	63.300	Meleagris_gallopavo
ENSKMAG00000017287	rpusd1	82	55.336	ENSMAUG00000019998	Rpusd1	96	55.336	Mesocricetus_auratus
ENSKMAG00000017287	rpusd1	98	56.000	ENSMICG00000017561	RPUSD1	98	56.000	Microcebus_murinus
ENSKMAG00000017287	rpusd1	98	57.000	ENSMOCG00000014082	Rpusd1	98	57.000	Microtus_ochrogaster
ENSKMAG00000017287	rpusd1	98	75.578	ENSMMOG00000012569	rpusd1	99	74.834	Mola_mola
ENSKMAG00000017287	rpusd1	99	62.295	ENSMODG00000016882	RPUSD1	99	61.716	Monodelphis_domestica
ENSKMAG00000017287	rpusd1	100	77.492	ENSMALG00000017818	rpusd1	100	77.170	Monopterus_albus
ENSKMAG00000017287	rpusd1	98	56.667	MGP_CAROLIEiJ_G0021244	Rpusd1	98	56.766	Mus_caroli
ENSKMAG00000017287	rpusd1	98	57.333	ENSMUSG00000041199	Rpusd1	98	57.426	Mus_musculus
ENSKMAG00000017287	rpusd1	98	56.811	MGP_PahariEiJ_G0023562	Rpusd1	98	56.811	Mus_pahari
ENSKMAG00000017287	rpusd1	98	57.333	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.426	Mus_spretus
ENSKMAG00000017287	rpusd1	96	57.288	ENSMPUG00000015897	RPUSD1	96	57.288	Mustela_putorius_furo
ENSKMAG00000017287	rpusd1	98	55.592	ENSMLUG00000001089	RPUSD1	98	55.592	Myotis_lucifugus
ENSKMAG00000017287	rpusd1	98	56.436	ENSNGAG00000003595	Rpusd1	98	55.776	Nannospalax_galili
ENSKMAG00000017287	rpusd1	100	78.502	ENSNBRG00000006457	rpusd1	100	78.502	Neolamprologus_brichardi
ENSKMAG00000017287	rpusd1	53	48.235	ENSNLEG00000008424	-	97	46.746	Nomascus_leucogenys
ENSKMAG00000017287	rpusd1	98	62.542	ENSMEUG00000016049	RPUSD1	98	62.542	Notamacropus_eugenii
ENSKMAG00000017287	rpusd1	98	49.333	ENSOPRG00000008340	RPUSD1	98	49.333	Ochotona_princeps
ENSKMAG00000017287	rpusd1	98	55.000	ENSODEG00000016945	RPUSD1	83	62.055	Octodon_degus
ENSKMAG00000017287	rpusd1	99	78.317	ENSONIG00000015672	rpusd1	100	78.317	Oreochromis_niloticus
ENSKMAG00000017287	rpusd1	100	78.431	ENSORLG00000013009	rpusd1	100	78.361	Oryzias_latipes
ENSKMAG00000017287	rpusd1	100	78.431	ENSORLG00020010382	rpusd1	100	78.361	Oryzias_latipes_hni
ENSKMAG00000017287	rpusd1	100	78.105	ENSORLG00015021354	rpusd1	100	78.033	Oryzias_latipes_hsok
ENSKMAG00000017287	rpusd1	100	78.033	ENSOMEG00000021426	rpusd1	100	76.721	Oryzias_melastigma
ENSKMAG00000017287	rpusd1	98	56.066	ENSOGAG00000003795	RPUSD1	98	56.066	Otolemur_garnettii
ENSKMAG00000017287	rpusd1	98	59.801	ENSOARG00000014254	RPUSD1	98	60.133	Ovis_aries
ENSKMAG00000017287	rpusd1	98	56.393	ENSPPAG00000034797	RPUSD1	98	56.026	Pan_paniscus
ENSKMAG00000017287	rpusd1	96	58.108	ENSPPRG00000012389	RPUSD1	96	58.108	Panthera_pardus
ENSKMAG00000017287	rpusd1	96	58.108	ENSPTIG00000008545	RPUSD1	89	57.095	Panthera_tigris_altaica
ENSKMAG00000017287	rpusd1	98	56.393	ENSPTRG00000007565	RPUSD1	98	56.026	Pan_troglodytes
ENSKMAG00000017287	rpusd1	98	56.066	ENSPANG00000024401	RPUSD1	98	55.700	Papio_anubis
ENSKMAG00000017287	rpusd1	98	69.128	ENSPKIG00000018890	rpusd1	89	69.128	Paramormyrops_kingsleyae
ENSKMAG00000017287	rpusd1	98	63.333	ENSPSIG00000013945	RPUSD1	99	63.333	Pelodiscus_sinensis
ENSKMAG00000017287	rpusd1	100	74.351	ENSPMGG00000014950	rpusd1	99	73.770	Periophthalmus_magnuspinnatus
ENSKMAG00000017287	rpusd1	98	56.766	ENSPEMG00000000497	Rpusd1	98	56.106	Peromyscus_maniculatus_bairdii
ENSKMAG00000017287	rpusd1	97	52.667	ENSPMAG00000001563	rpusd1	98	52.333	Petromyzon_marinus
ENSKMAG00000017287	rpusd1	99	62.914	ENSPCIG00000021216	-	93	62.706	Phascolarctos_cinereus
ENSKMAG00000017287	rpusd1	99	85.149	ENSPFOG00000007946	rpusd1	99	85.149	Poecilia_formosa
ENSKMAG00000017287	rpusd1	99	85.149	ENSPLAG00000011925	rpusd1	99	85.149	Poecilia_latipinna
ENSKMAG00000017287	rpusd1	99	85.149	ENSPMEG00000002910	rpusd1	99	85.149	Poecilia_mexicana
ENSKMAG00000017287	rpusd1	99	86.469	ENSPREG00000019851	rpusd1	99	86.469	Poecilia_reticulata
ENSKMAG00000017287	rpusd1	98	44.000	ENSPCAG00000002258	RPUSD1	98	43.333	Procavia_capensis
ENSKMAG00000017287	rpusd1	98	55.410	ENSPCOG00000022582	RPUSD1	98	54.754	Propithecus_coquereli
ENSKMAG00000017287	rpusd1	98	52.288	ENSPVAG00000013104	RPUSD1	98	51.803	Pteropus_vampyrus
ENSKMAG00000017287	rpusd1	100	78.526	ENSPNYG00000024076	rpusd1	100	78.526	Pundamilia_nyererei
ENSKMAG00000017287	rpusd1	98	67.114	ENSPNAG00000013806	rpusd1	99	66.779	Pygocentrus_nattereri
ENSKMAG00000017287	rpusd1	98	57.333	ENSRNOG00000023639	Rpusd1	98	57.000	Rattus_norvegicus
ENSKMAG00000017287	rpusd1	98	56.393	ENSRBIG00000030238	RPUSD1	98	56.026	Rhinopithecus_bieti
ENSKMAG00000017287	rpusd1	98	56.393	ENSRROG00000036663	RPUSD1	98	56.026	Rhinopithecus_roxellana
ENSKMAG00000017287	rpusd1	98	57.333	ENSSBOG00000033063	RPUSD1	98	57.000	Saimiri_boliviensis_boliviensis
ENSKMAG00000017287	rpusd1	98	61.462	ENSSHAG00000013500	RPUSD1	98	61.462	Sarcophilus_harrisii
ENSKMAG00000017287	rpusd1	98	71.237	ENSSFOG00015014394	rpusd1	99	71.237	Scleropages_formosus
ENSKMAG00000017287	rpusd1	99	79.545	ENSSMAG00000008045	rpusd1	92	79.545	Scophthalmus_maximus
ENSKMAG00000017287	rpusd1	100	81.290	ENSSDUG00000001829	rpusd1	97	81.290	Seriola_dumerili
ENSKMAG00000017287	rpusd1	100	81.290	ENSSLDG00000020853	rpusd1	97	81.290	Seriola_lalandi_dorsalis
ENSKMAG00000017287	rpusd1	54	72.289	ENSSARG00000011187	-	99	72.289	Sorex_araneus
ENSKMAG00000017287	rpusd1	62	60.317	ENSSPUG00000005119	-	98	58.511	Sphenodon_punctatus
ENSKMAG00000017287	rpusd1	100	81.935	ENSSPAG00000012708	rpusd1	100	81.935	Stegastes_partitus
ENSKMAG00000017287	rpusd1	98	57.377	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSKMAG00000017287	rpusd1	82	69.721	ENSTGUG00000015375	RPUSD1	99	69.721	Taeniopygia_guttata
ENSKMAG00000017287	rpusd1	100	74.194	ENSTRUG00000003041	rpusd1	99	75.806	Takifugu_rubripes
ENSKMAG00000017287	rpusd1	98	72.000	ENSTNIG00000002660	rpusd1	99	72.000	Tetraodon_nigroviridis
ENSKMAG00000017287	rpusd1	98	57.516	ENSTTRG00000010167	RPUSD1	98	57.377	Tursiops_truncatus
ENSKMAG00000017287	rpusd1	98	57.333	ENSUAMG00000012736	RPUSD1	98	58.000	Ursus_americanus
ENSKMAG00000017287	rpusd1	98	57.333	ENSUMAG00000021174	RPUSD1	94	62.934	Ursus_maritimus
ENSKMAG00000017287	rpusd1	98	57.000	ENSVVUG00000012357	RPUSD1	98	57.333	Vulpes_vulpes
ENSKMAG00000017287	rpusd1	98	62.207	ENSXETG00000007184	rpusd1	98	61.538	Xenopus_tropicalis
ENSKMAG00000017287	rpusd1	99	85.479	ENSXCOG00000017930	rpusd1	99	85.479	Xiphophorus_couchianus
ENSKMAG00000017287	rpusd1	99	85.809	ENSXMAG00000024084	rpusd1	99	85.809	Xiphophorus_maculatus