EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017317 (Gene tree)
Gene ID: 108240709
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6351 bases
Position: chrLWHD01000079.1:2201923-2208273
Accession: 108240709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023335	RRM_1	PF00076.22	2.3e-11	1	1
ENSKMAP00000023335	RRM_3	PF08777.11	2.7e-29	1	1
ENSKMAP00000023335	La	PF05383.17	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023632	-	2606	XM_017424387	ENSKMAP00000023335	398 (aa)	XP_017279876	UPI0007F88DF9

Gene Model

Click here to download ENSKMAG00000017317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017317	ssb	100	56.235	ENSG00000138385	SSB	98	66.102	Homo_sapiens
ENSKMAG00000017317	ssb	100	84.673	ENSAPOG00000003448	ssb	100	84.673	Acanthochromis_polyacanthus
ENSKMAG00000017317	ssb	100	54.654	ENSAMEG00000010507	SSB	99	54.415	Ailuropoda_melanoleuca
ENSKMAG00000017317	ssb	93	80.645	ENSACIG00000001738	ssb	97	80.914	Amphilophus_citrinellus
ENSKMAG00000017317	ssb	100	84.673	ENSAOCG00000020398	ssb	100	84.673	Amphiprion_ocellaris
ENSKMAG00000017317	ssb	100	84.673	ENSAPEG00000020395	ssb	100	84.673	Amphiprion_percula
ENSKMAG00000017317	ssb	100	86.967	ENSATEG00000016884	ssb	100	86.967	Anabas_testudineus
ENSKMAG00000017317	ssb	99	53.606	ENSAPLG00000006109	SSB	98	53.976	Anas_platyrhynchos
ENSKMAG00000017317	ssb	100	54.015	ENSACAG00000017008	SSB	99	54.745	Anolis_carolinensis
ENSKMAG00000017317	ssb	100	50.985	ENSANAG00000027195	-	99	49.754	Aotus_nancymaae
ENSKMAG00000017317	ssb	100	76.190	ENSACLG00000010798	ssb	100	76.190	Astatotilapia_calliptera
ENSKMAG00000017317	ssb	100	60.732	ENSAMXG00000012606	ssb	100	62.683	Astyanax_mexicanus
ENSKMAG00000017317	ssb	100	57.531	ENSBTAG00000008716	SSB	99	57.037	Bos_taurus
ENSKMAG00000017317	ssb	76	35.179	WBGene00016653	C44E4.4	80	36.364	Caenorhabditis_elegans
ENSKMAG00000017317	ssb	100	56.650	ENSCJAG00000045073	SSB	99	56.404	Callithrix_jacchus
ENSKMAG00000017317	ssb	100	56.511	ENSCAFG00000012418	SSB	99	56.020	Canis_familiaris
ENSKMAG00000017317	ssb	100	56.511	ENSCAFG00020002900	SSB	99	56.020	Canis_lupus_dingo
ENSKMAG00000017317	ssb	100	56.650	ENSCHIG00000022624	-	99	56.158	Capra_hircus
ENSKMAG00000017317	ssb	100	53.846	ENSCHIG00000022196	-	99	53.350	Capra_hircus
ENSKMAG00000017317	ssb	99	57.037	ENSTSYG00000000097	SSB	99	56.543	Carlito_syrichta
ENSKMAG00000017317	ssb	100	57.389	ENSCPOG00000003338	SSB	99	56.897	Cavia_porcellus
ENSKMAG00000017317	ssb	100	56.650	ENSCCAG00000035147	SSB	99	56.404	Cebus_capucinus
ENSKMAG00000017317	ssb	72	52.577	ENSCATG00000036701	SSB	83	52.234	Cercocebus_atys
ENSKMAG00000017317	ssb	99	42.607	ENSCATG00000042909	-	97	42.356	Cercocebus_atys
ENSKMAG00000017317	ssb	100	56.897	ENSCLAG00000015617	-	99	56.404	Chinchilla_lanigera
ENSKMAG00000017317	ssb	100	56.897	ENSCSAG00000015200	SSB	88	56.650	Chlorocebus_sabaeus
ENSKMAG00000017317	ssb	99	51.250	ENSCSAG00000018390	-	100	51.000	Chlorocebus_sabaeus
ENSKMAG00000017317	ssb	100	57.389	ENSCHOG00000007763	SSB	99	56.897	Choloepus_hoffmanni
ENSKMAG00000017317	ssb	99	58.809	ENSCPBG00000006519	SSB	99	59.512	Chrysemys_picta_bellii
ENSKMAG00000017317	ssb	93	45.213	ENSCANG00000028838	-	88	44.947	Colobus_angolensis_palliatus
ENSKMAG00000017317	ssb	100	56.897	ENSCANG00000027695	SSB	99	56.650	Colobus_angolensis_palliatus
ENSKMAG00000017317	ssb	100	49.136	ENSCANG00000033240	-	99	48.889	Colobus_angolensis_palliatus
ENSKMAG00000017317	ssb	100	53.301	ENSCGRG00001024831	Ssb	99	53.545	Cricetulus_griseus_chok1gshd
ENSKMAG00000017317	ssb	100	53.301	ENSCGRG00000005387	Ssb	99	53.545	Cricetulus_griseus_crigri
ENSKMAG00000017317	ssb	99	83.166	ENSCSEG00000011599	ssb	99	83.166	Cynoglossus_semilaevis
ENSKMAG00000017317	ssb	100	82.750	ENSCVAG00000021558	ssb	100	83.250	Cyprinodon_variegatus
ENSKMAG00000017317	ssb	100	63.457	ENSDARG00000029252	ssb	100	63.457	Danio_rerio
ENSKMAG00000017317	ssb	100	57.143	ENSDNOG00000013450	SSB	99	56.650	Dasypus_novemcinctus
ENSKMAG00000017317	ssb	100	54.074	ENSDORG00000005543	Ssb	99	54.074	Dipodomys_ordii
ENSKMAG00000017317	ssb	86	34.637	FBgn0011638	La	79	36.000	Drosophila_melanogaster
ENSKMAG00000017317	ssb	51	63.366	ENSETEG00000004614	-	52	63.366	Echinops_telfairi
ENSKMAG00000017317	ssb	97	43.846	ENSEBUG00000001237	ssb	96	43.590	Eptatretus_burgeri
ENSKMAG00000017317	ssb	100	56.897	ENSEASG00005022835	SSB	99	56.404	Equus_asinus_asinus
ENSKMAG00000017317	ssb	100	56.897	ENSECAG00000018495	SSB	99	56.404	Equus_caballus
ENSKMAG00000017317	ssb	77	49.351	ENSEEUG00000008077	SSB	78	49.351	Erinaceus_europaeus
ENSKMAG00000017317	ssb	100	72.457	ENSELUG00000020929	ssb	100	72.705	Esox_lucius
ENSKMAG00000017317	ssb	100	57.248	ENSFCAG00000011601	SSB	99	56.757	Felis_catus
ENSKMAG00000017317	ssb	98	57.000	ENSFALG00000000930	SSB	99	56.511	Ficedula_albicollis
ENSKMAG00000017317	ssb	100	57.143	ENSFDAG00000000598	SSB	99	56.650	Fukomys_damarensis
ENSKMAG00000017317	ssb	75	78.808	ENSFHEG00000003268	ssb	94	80.456	Fundulus_heteroclitus
ENSKMAG00000017317	ssb	98	74.250	ENSGMOG00000002664	ssb	100	74.250	Gadus_morhua
ENSKMAG00000017317	ssb	98	56.824	ENSGALG00000009677	SSB	99	55.257	Gallus_gallus
ENSKMAG00000017317	ssb	100	84.119	ENSGAFG00000002749	ssb	100	84.367	Gambusia_affinis
ENSKMAG00000017317	ssb	100	79.208	ENSGACG00000005107	ssb	100	78.713	Gasterosteus_aculeatus
ENSKMAG00000017317	ssb	99	57.816	ENSGAGG00000007807	SSB	99	58.537	Gopherus_agassizii
ENSKMAG00000017317	ssb	54	52.018	ENSGGOG00000023471	-	90	51.570	Gorilla_gorilla
ENSKMAG00000017317	ssb	100	48.030	ENSGGOG00000024891	-	99	48.030	Gorilla_gorilla
ENSKMAG00000017317	ssb	100	76.190	ENSHBUG00000006584	ssb	100	76.190	Haplochromis_burtoni
ENSKMAG00000017317	ssb	98	51.508	ENSHGLG00000004478	-	97	51.256	Heterocephalus_glaber_female
ENSKMAG00000017317	ssb	100	50.873	ENSHGLG00000005832	-	99	50.374	Heterocephalus_glaber_female
ENSKMAG00000017317	ssb	100	56.068	ENSHGLG00000017580	-	99	55.718	Heterocephalus_glaber_female
ENSKMAG00000017317	ssb	100	56.068	ENSHGLG00100003084	-	99	55.718	Heterocephalus_glaber_male
ENSKMAG00000017317	ssb	100	52.357	ENSHGLG00100008767	-	99	51.861	Heterocephalus_glaber_male
ENSKMAG00000017317	ssb	99	76.263	ENSHCOG00000019011	ssb	99	76.768	Hippocampus_comes
ENSKMAG00000017317	ssb	100	63.747	ENSIPUG00000003681	SSB	100	63.747	Ictalurus_punctatus
ENSKMAG00000017317	ssb	100	56.404	ENSSTOG00000008416	SSB	99	55.911	Ictidomys_tridecemlineatus
ENSKMAG00000017317	ssb	100	51.799	ENSJJAG00000023158	-	99	51.799	Jaculus_jaculus
ENSKMAG00000017317	ssb	89	46.629	ENSJJAG00000016250	-	94	46.067	Jaculus_jaculus
ENSKMAG00000017317	ssb	100	83.166	ENSLBEG00000017345	ssb	100	83.166	Labrus_bergylta
ENSKMAG00000017317	ssb	99	54.455	ENSLACG00000014056	SSB	98	54.703	Latimeria_chalumnae
ENSKMAG00000017317	ssb	100	67.076	ENSLOCG00000007933	ssb	99	67.076	Lepisosteus_oculatus
ENSKMAG00000017317	ssb	75	42.617	ENSLAFG00000026721	-	98	42.617	Loxodonta_africana
ENSKMAG00000017317	ssb	100	53.444	ENSLAFG00000000867	-	99	53.682	Loxodonta_africana
ENSKMAG00000017317	ssb	100	49.630	ENSLAFG00000028909	-	99	49.136	Loxodonta_africana
ENSKMAG00000017317	ssb	88	49.014	ENSMFAG00000041478	-	90	51.376	Macaca_fascicularis
ENSKMAG00000017317	ssb	100	56.897	ENSMFAG00000039066	SSB	99	56.650	Macaca_fascicularis
ENSKMAG00000017317	ssb	99	40.602	ENSMMUG00000039889	-	98	41.855	Macaca_mulatta
ENSKMAG00000017317	ssb	100	48.148	ENSMMUG00000011724	-	97	48.148	Macaca_mulatta
ENSKMAG00000017317	ssb	100	56.897	ENSMMUG00000023051	SSB	99	56.650	Macaca_mulatta
ENSKMAG00000017317	ssb	100	48.537	ENSMNEG00000028321	SSB	85	67.826	Macaca_nemestrina
ENSKMAG00000017317	ssb	88	49.014	ENSMNEG00000034698	-	90	51.376	Macaca_nemestrina
ENSKMAG00000017317	ssb	100	39.753	ENSMLEG00000042644	-	99	38.519	Mandrillus_leucophaeus
ENSKMAG00000017317	ssb	100	56.897	ENSMLEG00000035717	SSB	88	67.826	Mandrillus_leucophaeus
ENSKMAG00000017317	ssb	100	84.673	ENSMAMG00000004800	ssb	100	84.673	Mastacembelus_armatus
ENSKMAG00000017317	ssb	100	76.190	ENSMZEG00005005749	ssb	100	76.190	Maylandia_zebra
ENSKMAG00000017317	ssb	98	56.824	ENSMGAG00000010328	SSB	97	62.000	Meleagris_gallopavo
ENSKMAG00000017317	ssb	97	51.134	ENSMICG00000033304	-	97	52.727	Microcebus_murinus
ENSKMAG00000017317	ssb	100	56.897	ENSMICG00000028252	-	99	56.404	Microcebus_murinus
ENSKMAG00000017317	ssb	93	56.919	ENSMODG00000008227	-	99	55.366	Monodelphis_domestica
ENSKMAG00000017317	ssb	100	38.821	ENSMODG00000007027	-	99	56.471	Monodelphis_domestica
ENSKMAG00000017317	ssb	79	60.588	ENSMODG00000019271	-	99	60.588	Monodelphis_domestica
ENSKMAG00000017317	ssb	92	79.564	ENSMALG00000008045	ssb	90	81.989	Monopterus_albus
ENSKMAG00000017317	ssb	100	53.717	MGP_CAROLIEiJ_G0023629	-	98	64.968	Mus_caroli
ENSKMAG00000017317	ssb	100	53.365	ENSMUSG00000068882	Ssb	98	64.968	Mus_musculus
ENSKMAG00000017317	ssb	100	52.885	MGP_PahariEiJ_G0025081	-	98	63.694	Mus_pahari
ENSKMAG00000017317	ssb	100	53.365	MGP_SPRETEiJ_G0024551	Ssb	98	64.968	Mus_spretus
ENSKMAG00000017317	ssb	100	57.143	ENSMPUG00000000785	SSB	99	56.650	Mustela_putorius_furo
ENSKMAG00000017317	ssb	100	55.904	ENSMLUG00000016316	SSB	99	55.663	Myotis_lucifugus
ENSKMAG00000017317	ssb	100	76.000	ENSNBRG00000012661	ssb	100	76.000	Neolamprologus_brichardi
ENSKMAG00000017317	ssb	85	44.898	ENSNLEG00000028754	-	77	46.177	Nomascus_leucogenys
ENSKMAG00000017317	ssb	100	56.650	ENSNLEG00000004958	SSB	99	56.404	Nomascus_leucogenys
ENSKMAG00000017317	ssb	63	62.800	ENSMEUG00000001650	-	100	62.800	Notamacropus_eugenii
ENSKMAG00000017317	ssb	93	55.764	ENSODEG00000004202	-	99	55.764	Octodon_degus
ENSKMAG00000017317	ssb	100	77.500	ENSONIG00000008776	ssb	100	77.500	Oreochromis_niloticus
ENSKMAG00000017317	ssb	97	56.997	ENSOANG00000008543	SSB	96	56.997	Ornithorhynchus_anatinus
ENSKMAG00000017317	ssb	100	56.650	ENSOCUG00000010396	SSB	99	56.404	Oryctolagus_cuniculus
ENSKMAG00000017317	ssb	100	80.500	ENSORLG00000017208	ssb	100	80.500	Oryzias_latipes
ENSKMAG00000017317	ssb	100	79.551	ENSORLG00020022574	ssb	100	80.050	Oryzias_latipes_hni
ENSKMAG00000017317	ssb	100	81.000	ENSORLG00015016592	ssb	100	81.000	Oryzias_latipes_hsok
ENSKMAG00000017317	ssb	100	83.042	ENSOMEG00000003193	ssb	100	82.294	Oryzias_melastigma
ENSKMAG00000017317	ssb	100	53.919	ENSOGAG00000029768	SSB	99	53.682	Otolemur_garnettii
ENSKMAG00000017317	ssb	100	56.897	ENSOARG00000002906	SSB	99	56.404	Ovis_aries
ENSKMAG00000017317	ssb	86	48.857	ENSPPAG00000006189	-	89	48.000	Pan_paniscus
ENSKMAG00000017317	ssb	100	56.235	ENSPPAG00000042673	SSB	99	55.990	Pan_paniscus
ENSKMAG00000017317	ssb	100	48.522	ENSPPAG00000032427	-	100	58.915	Pan_paniscus
ENSKMAG00000017317	ssb	100	57.248	ENSPPRG00000006599	SSB	99	56.757	Panthera_pardus
ENSKMAG00000017317	ssb	100	57.248	ENSPTIG00000011021	SSB	97	56.757	Panthera_tigris_altaica
ENSKMAG00000017317	ssb	100	56.235	ENSPTRG00000012620	SSB	99	55.990	Pan_troglodytes
ENSKMAG00000017317	ssb	100	46.059	ENSPTRG00000042880	-	99	46.059	Pan_troglodytes
ENSKMAG00000017317	ssb	100	56.897	ENSPANG00000007440	SSB	99	56.650	Papio_anubis
ENSKMAG00000017317	ssb	99	41.266	ENSPANG00000034126	-	75	45.938	Papio_anubis
ENSKMAG00000017317	ssb	97	38.974	ENSPANG00000031877	-	92	38.205	Papio_anubis
ENSKMAG00000017317	ssb	100	69.900	ENSPKIG00000019325	ssb	99	69.900	Paramormyrops_kingsleyae
ENSKMAG00000017317	ssb	99	57.072	ENSPSIG00000002265	SSB	93	57.805	Pelodiscus_sinensis
ENSKMAG00000017317	ssb	88	72.286	ENSPMGG00000020075	ssb	91	73.143	Periophthalmus_magnuspinnatus
ENSKMAG00000017317	ssb	95	45.833	ENSPMAG00000002982	ssb	89	45.833	Petromyzon_marinus
ENSKMAG00000017317	ssb	93	58.667	ENSPCIG00000028591	-	99	56.897	Phascolarctos_cinereus
ENSKMAG00000017317	ssb	100	84.750	ENSPFOG00000009650	ssb	100	84.750	Poecilia_formosa
ENSKMAG00000017317	ssb	100	84.500	ENSPLAG00000020498	ssb	100	85.000	Poecilia_latipinna
ENSKMAG00000017317	ssb	100	84.500	ENSPMEG00000001051	ssb	100	84.500	Poecilia_mexicana
ENSKMAG00000017317	ssb	93	84.409	ENSPREG00000003708	ssb	98	84.182	Poecilia_reticulata
ENSKMAG00000017317	ssb	100	56.650	ENSPPYG00000012919	SSB	99	56.404	Pongo_abelii
ENSKMAG00000017317	ssb	95	55.729	ENSPCAG00000010276	SSB	99	55.990	Procavia_capensis
ENSKMAG00000017317	ssb	100	54.926	ENSPCOG00000015741	-	92	66.379	Propithecus_coquereli
ENSKMAG00000017317	ssb	100	51.232	ENSPCOG00000023189	-	99	50.739	Propithecus_coquereli
ENSKMAG00000017317	ssb	89	58.543	ENSPVAG00000006615	SSB	99	58.543	Pteropus_vampyrus
ENSKMAG00000017317	ssb	100	76.190	ENSPNYG00000006444	ssb	100	76.190	Pundamilia_nyererei
ENSKMAG00000017317	ssb	100	63.659	ENSPNAG00000011708	ssb	100	63.659	Pygocentrus_nattereri
ENSKMAG00000017317	ssb	100	52.404	ENSRNOG00000007998	Ssb	99	51.923	Rattus_norvegicus
ENSKMAG00000017317	ssb	100	53.102	ENSRNOG00000011606	AABR07061825.1	99	52.605	Rattus_norvegicus
ENSKMAG00000017317	ssb	86	53.143	ENSRBIG00000041608	-	94	50.571	Rhinopithecus_bieti
ENSKMAG00000017317	ssb	100	49.512	ENSRBIG00000041972	SSB	88	67.826	Rhinopithecus_bieti
ENSKMAG00000017317	ssb	94	47.895	ENSRBIG00000041232	-	98	47.757	Rhinopithecus_bieti
ENSKMAG00000017317	ssb	99	40.500	ENSRBIG00000029918	-	97	40.250	Rhinopithecus_bieti
ENSKMAG00000017317	ssb	98	48.232	ENSRROG00000031684	-	99	47.980	Rhinopithecus_roxellana
ENSKMAG00000017317	ssb	86	55.143	ENSRROG00000034102	-	97	50.376	Rhinopithecus_roxellana
ENSKMAG00000017317	ssb	100	56.897	ENSRROG00000040346	SSB	99	56.650	Rhinopithecus_roxellana
ENSKMAG00000017317	ssb	99	45.500	ENSRROG00000007149	-	97	45.250	Rhinopithecus_roxellana
ENSKMAG00000017317	ssb	100	56.404	ENSSBOG00000027204	SSB	99	56.158	Saimiri_boliviensis_boliviensis
ENSKMAG00000017317	ssb	100	56.404	ENSSHAG00000018062	SSB	99	56.404	Sarcophilus_harrisii
ENSKMAG00000017317	ssb	100	67.734	ENSSFOG00015000550	ssb	99	67.734	Scleropages_formosus
ENSKMAG00000017317	ssb	100	82.161	ENSSMAG00000013885	ssb	99	84.946	Scophthalmus_maximus
ENSKMAG00000017317	ssb	100	87.688	ENSSDUG00000020117	ssb	100	87.688	Seriola_dumerili
ENSKMAG00000017317	ssb	100	83.166	ENSSLDG00000002525	ssb	100	83.417	Seriola_lalandi_dorsalis
ENSKMAG00000017317	ssb	95	51.823	ENSSARG00000007747	SSB	99	51.823	Sorex_araneus
ENSKMAG00000017317	ssb	99	58.603	ENSSPUG00000012112	SSB	99	58.435	Sphenodon_punctatus
ENSKMAG00000017317	ssb	100	83.920	ENSSPAG00000005696	ssb	100	83.920	Stegastes_partitus
ENSKMAG00000017317	ssb	94	54.111	ENSSSCG00000015938	SSB	93	53.846	Sus_scrofa
ENSKMAG00000017317	ssb	94	56.693	ENSTGUG00000007942	SSB	99	55.990	Taeniopygia_guttata
ENSKMAG00000017317	ssb	100	78.392	ENSTRUG00000017839	ssb	100	80.402	Takifugu_rubripes
ENSKMAG00000017317	ssb	92	77.507	ENSTNIG00000000915	ssb	100	76.022	Tetraodon_nigroviridis
ENSKMAG00000017317	ssb	82	67.826	ENSTBEG00000009056	SSB	81	67.826	Tupaia_belangeri
ENSKMAG00000017317	ssb	100	57.002	ENSTTRG00000002152	SSB	99	56.511	Tursiops_truncatus
ENSKMAG00000017317	ssb	94	57.784	ENSUAMG00000027833	SSB	99	57.256	Ursus_americanus
ENSKMAG00000017317	ssb	100	56.511	ENSUMAG00000013907	SSB	99	56.020	Ursus_maritimus
ENSKMAG00000017317	ssb	100	56.341	ENSVPAG00000007183	SSB	99	55.854	Vicugna_pacos
ENSKMAG00000017317	ssb	100	56.511	ENSVVUG00000016573	SSB	77	56.020	Vulpes_vulpes
ENSKMAG00000017317	ssb	99	52.336	ENSXETG00000025402	ssb	99	52.103	Xenopus_tropicalis
ENSKMAG00000017317	ssb	93	79.301	ENSXCOG00000019109	ssb	97	79.301	Xiphophorus_couchianus
ENSKMAG00000017317	ssb	100	83.127	ENSXMAG00000004888	ssb	100	83.127	Xiphophorus_maculatus