EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017355 (Gene tree)
Gene ID: 108243729
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9872 bases
Position: chrLWHD01000123.1:418782-428653
Accession: 108243729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023383	RRM_1	PF00076.22	1.4e-28	1	2
ENSKMAP00000023383	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023682	-	3888	XM_017429367	ENSKMAP00000023383	732 (aa)	XP_017284856	UPI0007F87584

Gene Model

Click here to download ENSKMAG00000017355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017355	raver1	93	50.606	ENSG00000161847	RAVER1	98	51.425	Homo_sapiens
ENSKMAG00000017355	raver1	98	83.983	ENSAPOG00000017267	raver1	92	83.836	Acanthochromis_polyacanthus
ENSKMAG00000017355	raver1	93	49.054	ENSAMEG00000011738	RAVER1	96	49.001	Ailuropoda_melanoleuca
ENSKMAG00000017355	raver1	98	84.658	ENSAOCG00000005128	raver1	97	84.499	Amphiprion_ocellaris
ENSKMAG00000017355	raver1	98	84.626	ENSAPEG00000010854	raver1	100	84.469	Amphiprion_percula
ENSKMAG00000017355	raver1	98	82.988	ENSATEG00000021004	raver1	100	82.834	Anabas_testudineus
ENSKMAG00000017355	raver1	64	55.912	ENSACAG00000008386	-	74	55.273	Anolis_carolinensis
ENSKMAG00000017355	raver1	93	50.401	ENSANAG00000028226	RAVER1	96	51.275	Aotus_nancymaae
ENSKMAG00000017355	raver1	100	83.265	ENSACLG00000018492	raver1	100	78.912	Astatotilapia_calliptera
ENSKMAG00000017355	raver1	90	68.796	ENSAMXG00000005132	raver1	100	64.926	Astyanax_mexicanus
ENSKMAG00000017355	raver1	93	50.272	ENSBTAG00000015721	RAVER1	98	52.228	Bos_taurus
ENSKMAG00000017355	raver1	93	50.202	ENSCJAG00000005671	RAVER1	96	51.220	Callithrix_jacchus
ENSKMAG00000017355	raver1	91	51.336	ENSCAFG00000017861	RAVER1	94	51.763	Canis_familiaris
ENSKMAG00000017355	raver1	91	51.336	ENSCAFG00020024449	RAVER1	96	51.763	Canis_lupus_dingo
ENSKMAG00000017355	raver1	93	49.204	ENSCHIG00000006718	RAVER1	98	51.090	Capra_hircus
ENSKMAG00000017355	raver1	73	59.020	ENSCAPG00000002269	RAVER1	100	50.808	Cavia_aperea
ENSKMAG00000017355	raver1	65	59.298	ENSCPOG00000001008	RAVER1	98	50.877	Cavia_porcellus
ENSKMAG00000017355	raver1	93	50.538	ENSCCAG00000031723	RAVER1	96	51.425	Cebus_capucinus
ENSKMAG00000017355	raver1	93	50.336	ENSCATG00000043863	RAVER1	96	51.425	Cercocebus_atys
ENSKMAG00000017355	raver1	91	50.000	ENSCLAG00000009336	RAVER1	98	49.202	Chinchilla_lanigera
ENSKMAG00000017355	raver1	93	50.270	ENSCSAG00000007317	RAVER1	82	51.359	Chlorocebus_sabaeus
ENSKMAG00000017355	raver1	91	51.340	ENSCPBG00000005349	-	96	51.072	Chrysemys_picta_bellii
ENSKMAG00000017355	raver1	67	58.929	ENSCANG00000008337	RAVER1	96	51.289	Colobus_angolensis_palliatus
ENSKMAG00000017355	raver1	91	48.784	ENSCGRG00001013260	-	97	49.130	Cricetulus_griseus_chok1gshd
ENSKMAG00000017355	raver1	91	48.784	ENSCGRG00000015138	-	97	49.130	Cricetulus_griseus_crigri
ENSKMAG00000017355	raver1	98	74.176	ENSCSEG00000021092	raver1	100	73.919	Cynoglossus_semilaevis
ENSKMAG00000017355	raver1	100	77.687	ENSCVAG00000013971	raver1	100	77.687	Cyprinodon_variegatus
ENSKMAG00000017355	raver1	98	67.769	ENSDARG00000052617	raver1	100	67.571	Danio_rerio
ENSKMAG00000017355	raver1	56	62.420	ENSDNOG00000035742	-	60	63.095	Dasypus_novemcinctus
ENSKMAG00000017355	raver1	93	46.729	ENSDORG00000010106	-	98	46.702	Dipodomys_ordii
ENSKMAG00000017355	raver1	53	67.519	ENSEASG00005010544	-	71	67.519	Equus_asinus_asinus
ENSKMAG00000017355	raver1	80	57.570	ENSECAG00000024966	RAVER1	96	50.267	Equus_caballus
ENSKMAG00000017355	raver1	97	73.780	ENSELUG00000023287	raver1	100	72.493	Esox_lucius
ENSKMAG00000017355	raver1	93	49.864	ENSFCAG00000009435	RAVER1	96	50.202	Felis_catus
ENSKMAG00000017355	raver1	91	49.727	ENSFDAG00000015113	RAVER1	98	50.000	Fukomys_damarensis
ENSKMAG00000017355	raver1	94	68.768	ENSGMOG00000003649	raver1	99	69.468	Gadus_morhua
ENSKMAG00000017355	raver1	65	40.041	ENSGALG00000050608	-	51	40.249	Gallus_gallus
ENSKMAG00000017355	raver1	100	79.104	ENSGAFG00000015944	raver1	100	79.104	Gambusia_affinis
ENSKMAG00000017355	raver1	95	68.707	ENSGACG00000013818	raver1	100	71.020	Gasterosteus_aculeatus
ENSKMAG00000017355	raver1	84	64.878	ENSGAGG00000011748	-	99	62.759	Gopherus_agassizii
ENSKMAG00000017355	raver1	93	51.009	ENSGGOG00000006015	RAVER1	96	51.425	Gorilla_gorilla
ENSKMAG00000017355	raver1	99	83.151	ENSHBUG00000021210	raver1	100	79.320	Haplochromis_burtoni
ENSKMAG00000017355	raver1	91	50.477	ENSHGLG00000015460	RAVER1	98	50.265	Heterocephalus_glaber_female
ENSKMAG00000017355	raver1	91	50.477	ENSHGLG00100000812	RAVER1	98	50.265	Heterocephalus_glaber_male
ENSKMAG00000017355	raver1	100	75.272	ENSHCOG00000000449	raver1	98	75.951	Hippocampus_comes
ENSKMAG00000017355	raver1	97	67.324	ENSIPUG00000013153	raver1	100	66.531	Ictalurus_punctatus
ENSKMAG00000017355	raver1	93	50.531	ENSSTOG00000003241	RAVER1	98	51.552	Ictidomys_tridecemlineatus
ENSKMAG00000017355	raver1	91	49.933	ENSJJAG00000018219	-	96	51.084	Jaculus_jaculus
ENSKMAG00000017355	raver1	92	82.912	ENSLBEG00000008268	raver1	95	82.912	Labrus_bergylta
ENSKMAG00000017355	raver1	85	49.150	ENSLACG00000005809	-	99	49.292	Latimeria_chalumnae
ENSKMAG00000017355	raver1	96	61.082	ENSLOCG00000007500	raver1	100	60.229	Lepisosteus_oculatus
ENSKMAG00000017355	raver1	73	76.364	ENSLAFG00000003664	-	99	51.884	Loxodonta_africana
ENSKMAG00000017355	raver1	80	59.046	ENSMFAG00000037977	RAVER1	96	51.223	Macaca_fascicularis
ENSKMAG00000017355	raver1	93	50.270	ENSMMUG00000014897	RAVER1	96	51.359	Macaca_mulatta
ENSKMAG00000017355	raver1	93	50.270	ENSMNEG00000028390	RAVER1	96	51.359	Macaca_nemestrina
ENSKMAG00000017355	raver1	93	50.471	ENSMLEG00000041959	RAVER1	96	51.560	Mandrillus_leucophaeus
ENSKMAG00000017355	raver1	98	82.019	ENSMAMG00000012059	raver1	100	81.880	Mastacembelus_armatus
ENSKMAG00000017355	raver1	100	83.265	ENSMZEG00005019002	raver1	100	83.265	Maylandia_zebra
ENSKMAG00000017355	raver1	79	57.692	ENSMAUG00000017948	-	97	50.474	Mesocricetus_auratus
ENSKMAG00000017355	raver1	93	51.412	ENSMICG00000010326	RAVER1	98	52.401	Microcebus_murinus
ENSKMAG00000017355	raver1	91	49.054	ENSMOCG00000015553	-	98	49.800	Microtus_ochrogaster
ENSKMAG00000017355	raver1	98	81.466	ENSMMOG00000012093	raver1	100	81.335	Mola_mola
ENSKMAG00000017355	raver1	89	49.783	ENSMODG00000005584	-	87	50.508	Monodelphis_domestica
ENSKMAG00000017355	raver1	100	77.007	ENSMALG00000016569	raver1	100	78.776	Monopterus_albus
ENSKMAG00000017355	raver1	92	47.730	MGP_CAROLIEiJ_G0031860	-	97	49.867	Mus_caroli
ENSKMAG00000017355	raver1	91	47.638	ENSMUSG00000010205	Raver1	97	49.800	Mus_musculus
ENSKMAG00000017355	raver1	91	47.670	MGP_PahariEiJ_G0014726	-	97	49.802	Mus_pahari
ENSKMAG00000017355	raver1	91	47.638	MGP_SPRETEiJ_G0032984	-	97	49.800	Mus_spretus
ENSKMAG00000017355	raver1	91	49.932	ENSMPUG00000006712	RAVER1	77	63.095	Mustela_putorius_furo
ENSKMAG00000017355	raver1	91	50.000	ENSMLUG00000012328	RAVER1	96	52.496	Myotis_lucifugus
ENSKMAG00000017355	raver1	79	59.000	ENSNGAG00000001260	-	98	48.327	Nannospalax_galili
ENSKMAG00000017355	raver1	100	74.286	ENSNBRG00000010139	raver1	100	75.238	Neolamprologus_brichardi
ENSKMAG00000017355	raver1	80	58.532	ENSNLEG00000012181	RAVER1	96	51.018	Nomascus_leucogenys
ENSKMAG00000017355	raver1	85	51.108	ENSMEUG00000003281	-	100	51.252	Notamacropus_eugenii
ENSKMAG00000017355	raver1	60	78.846	ENSODEG00000016260	RAVER1	98	48.874	Octodon_degus
ENSKMAG00000017355	raver1	92	81.525	ENSONIG00000001559	raver1	99	84.142	Oreochromis_niloticus
ENSKMAG00000017355	raver1	82	56.805	ENSOCUG00000020918	RAVER1	98	50.067	Oryctolagus_cuniculus
ENSKMAG00000017355	raver1	100	79.508	ENSORLG00000005458	raver1	100	79.508	Oryzias_latipes
ENSKMAG00000017355	raver1	100	79.918	ENSORLG00020004392	raver1	100	79.918	Oryzias_latipes_hni
ENSKMAG00000017355	raver1	100	79.918	ENSORLG00015017222	raver1	100	79.918	Oryzias_latipes_hsok
ENSKMAG00000017355	raver1	91	97.959	ENSOMEG00000023956	raver1	100	97.959	Oryzias_melastigma
ENSKMAG00000017355	raver1	93	50.199	ENSOGAG00000011071	RAVER1	96	50.202	Otolemur_garnettii
ENSKMAG00000017355	raver1	74	78.846	ENSOARG00000015886	RAVER1	73	76.364	Ovis_aries
ENSKMAG00000017355	raver1	93	50.606	ENSPPAG00000002611	RAVER1	96	51.425	Pan_paniscus
ENSKMAG00000017355	raver1	93	49.729	ENSPPRG00000009912	RAVER1	96	50.472	Panthera_pardus
ENSKMAG00000017355	raver1	93	50.606	ENSPTRG00000010466	RAVER1	96	51.425	Pan_troglodytes
ENSKMAG00000017355	raver1	93	50.336	ENSPANG00000004122	RAVER1	96	51.425	Papio_anubis
ENSKMAG00000017355	raver1	91	49.189	ENSPEMG00000016411	-	97	49.866	Peromyscus_maniculatus_bairdii
ENSKMAG00000017355	raver1	93	52.699	ENSPCIG00000018695	-	97	53.495	Phascolarctos_cinereus
ENSKMAG00000017355	raver1	100	74.900	ENSPFOG00000007016	raver1	100	76.636	Poecilia_formosa
ENSKMAG00000017355	raver1	95	76.286	ENSPLAG00000020793	raver1	99	76.286	Poecilia_latipinna
ENSKMAG00000017355	raver1	100	78.155	ENSPMEG00000011220	raver1	100	78.155	Poecilia_mexicana
ENSKMAG00000017355	raver1	100	73.913	ENSPREG00000006864	raver1	100	73.505	Poecilia_reticulata
ENSKMAG00000017355	raver1	80	58.939	ENSPPYG00000010514	RAVER1	82	51.417	Pongo_abelii
ENSKMAG00000017355	raver1	93	50.202	ENSPCOG00000026605	RAVER1	96	51.009	Propithecus_coquereli
ENSKMAG00000017355	raver1	91	48.238	ENSPVAG00000003689	RAVER1	98	50.683	Pteropus_vampyrus
ENSKMAG00000017355	raver1	100	78.308	ENSPNYG00000013284	raver1	100	79.263	Pundamilia_nyererei
ENSKMAG00000017355	raver1	97	68.741	ENSPNAG00000015476	raver1	100	68.280	Pygocentrus_nattereri
ENSKMAG00000017355	raver1	66	56.250	ENSRNOG00000020710	Raver1	97	50.809	Rattus_norvegicus
ENSKMAG00000017355	raver1	93	50.820	ENSRBIG00000034702	RAVER1	96	52.720	Rhinopithecus_bieti
ENSKMAG00000017355	raver1	93	51.811	ENSRROG00000031186	RAVER1	96	52.580	Rhinopithecus_roxellana
ENSKMAG00000017355	raver1	93	52.162	ENSSBOG00000023423	RAVER1	96	52.851	Saimiri_boliviensis_boliviensis
ENSKMAG00000017355	raver1	85	52.134	ENSSHAG00000008181	-	90	52.914	Sarcophilus_harrisii
ENSKMAG00000017355	raver1	98	82.897	ENSSMAG00000004546	raver1	100	82.745	Scophthalmus_maximus
ENSKMAG00000017355	raver1	98	85.477	ENSSDUG00000021063	raver1	100	85.286	Seriola_dumerili
ENSKMAG00000017355	raver1	98	85.477	ENSSLDG00000014505	raver1	100	85.286	Seriola_lalandi_dorsalis
ENSKMAG00000017355	raver1	98	85.477	ENSSPAG00000000688	raver1	100	85.422	Stegastes_partitus
ENSKMAG00000017355	raver1	93	50.342	ENSSSCG00000013650	-	98	52.295	Sus_scrofa
ENSKMAG00000017355	raver1	98	78.315	ENSTRUG00000025641	raver1	100	78.231	Takifugu_rubripes
ENSKMAG00000017355	raver1	93	48.945	ENSTTRG00000009552	RAVER1	98	51.762	Tursiops_truncatus
ENSKMAG00000017355	raver1	93	50.135	ENSUAMG00000020385	RAVER1	96	50.067	Ursus_americanus
ENSKMAG00000017355	raver1	91	51.336	ENSVVUG00000028976	RAVER1	94	51.763	Vulpes_vulpes
ENSKMAG00000017355	raver1	90	52.838	ENSXETG00000011622	raver1	100	49.803	Xenopus_tropicalis
ENSKMAG00000017355	raver1	100	79.348	ENSXCOG00000016368	raver1	100	79.348	Xiphophorus_couchianus
ENSKMAG00000017355	raver1	100	79.348	ENSXMAG00000000217	raver1	100	79.348	Xiphophorus_maculatus