EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017358 (Gene tree)
Gene ID: 108245409
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14968 bases
Position: chrLWHD01000173.1:95967-110934
Accession: 108245409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023432	RRM_1	PF00076.22	1.3e-14	1	2
ENSKMAP00000023432	RRM_1	PF00076.22	1.3e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023731	-	1479	XM_017432304	ENSKMAP00000023432	492 (aa)	XP_017287793	-

Gene Model

Click here to download ENSKMAG00000017358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017358	rnpc3	98	54.635	ENSG00000185946	RNPC3	100	53.623	Homo_sapiens
ENSKMAG00000017358	rnpc3	99	81.400	ENSAPOG00000017371	rnpc3	99	81.800	Acanthochromis_polyacanthus
ENSKMAG00000017358	rnpc3	97	54.257	ENSAMEG00000001694	RNPC3	95	54.839	Ailuropoda_melanoleuca
ENSKMAG00000017358	rnpc3	100	74.853	ENSACIG00000021043	rnpc3	100	75.246	Amphilophus_citrinellus
ENSKMAG00000017358	rnpc3	99	80.473	ENSAOCG00000014052	rnpc3	98	80.671	Amphiprion_ocellaris
ENSKMAG00000017358	rnpc3	99	80.473	ENSAPEG00000008739	rnpc3	98	80.671	Amphiprion_percula
ENSKMAG00000017358	rnpc3	99	79.142	ENSATEG00000021263	rnpc3	99	79.532	Anabas_testudineus
ENSKMAG00000017358	rnpc3	89	53.863	ENSAPLG00000015605	RNPC3	99	54.204	Anas_platyrhynchos
ENSKMAG00000017358	rnpc3	95	55.072	ENSACAG00000002029	RNPC3	96	53.722	Anolis_carolinensis
ENSKMAG00000017358	rnpc3	98	54.331	ENSANAG00000019950	RNPC3	95	55.242	Aotus_nancymaae
ENSKMAG00000017358	rnpc3	100	79.641	ENSACLG00000014702	rnpc3	99	80.040	Astatotilapia_calliptera
ENSKMAG00000017358	rnpc3	99	64.833	ENSAMXG00000033372	rnpc3	99	63.495	Astyanax_mexicanus
ENSKMAG00000017358	rnpc3	97	54.871	ENSBTAG00000019091	RNPC3	95	55.466	Bos_taurus
ENSKMAG00000017358	rnpc3	98	56.301	ENSCJAG00000035686	RNPC3	94	56.442	Callithrix_jacchus
ENSKMAG00000017358	rnpc3	97	54.365	ENSCAFG00000019972	RNPC3	95	54.949	Canis_familiaris
ENSKMAG00000017358	rnpc3	97	54.365	ENSCAFG00020011300	RNPC3	95	54.949	Canis_lupus_dingo
ENSKMAG00000017358	rnpc3	97	56.162	ENSCHIG00000020361	RNPC3	95	55.354	Capra_hircus
ENSKMAG00000017358	rnpc3	97	54.274	ENSTSYG00000030256	RNPC3	95	54.858	Carlito_syrichta
ENSKMAG00000017358	rnpc3	86	46.991	ENSCAPG00000013600	RNPC3	58	50.000	Cavia_aperea
ENSKMAG00000017358	rnpc3	97	53.770	ENSCPOG00000031638	RNPC3	95	54.141	Cavia_porcellus
ENSKMAG00000017358	rnpc3	98	54.134	ENSCCAG00000024301	RNPC3	95	55.040	Cebus_capucinus
ENSKMAG00000017358	rnpc3	97	54.851	ENSCATG00000002086	RNPC3	94	55.444	Cercocebus_atys
ENSKMAG00000017358	rnpc3	98	42.222	ENSCATG00000035930	-	51	50.855	Cercocebus_atys
ENSKMAG00000017358	rnpc3	97	52.988	ENSCLAG00000005169	RNPC3	95	53.347	Chinchilla_lanigera
ENSKMAG00000017358	rnpc3	97	54.851	ENSCSAG00000001519	RNPC3	94	55.444	Chlorocebus_sabaeus
ENSKMAG00000017358	rnpc3	97	55.847	ENSCPBG00000028311	RNPC3	95	56.478	Chrysemys_picta_bellii
ENSKMAG00000017358	rnpc3	95	36.688	ENSCSAVG00000002800	-	74	53.125	Ciona_savignyi
ENSKMAG00000017358	rnpc3	97	54.653	ENSCANG00000031444	RNPC3	94	55.242	Colobus_angolensis_palliatus
ENSKMAG00000017358	rnpc3	97	52.295	ENSCGRG00001019276	Rnpc3	95	53.955	Cricetulus_griseus_chok1gshd
ENSKMAG00000017358	rnpc3	89	49.892	ENSCGRG00000000053	Rnpc3	99	51.648	Cricetulus_griseus_crigri
ENSKMAG00000017358	rnpc3	99	74.349	ENSCSEG00000013475	rnpc3	99	74.349	Cynoglossus_semilaevis
ENSKMAG00000017358	rnpc3	99	81.336	ENSCVAG00000002645	rnpc3	99	81.729	Cyprinodon_variegatus
ENSKMAG00000017358	rnpc3	99	64.729	ENSDARG00000011247	rnpc3	98	66.333	Danio_rerio
ENSKMAG00000017358	rnpc3	97	53.877	ENSDNOG00000047498	-	95	54.656	Dasypus_novemcinctus
ENSKMAG00000017358	rnpc3	97	53.479	ENSDNOG00000044555	-	95	54.251	Dasypus_novemcinctus
ENSKMAG00000017358	rnpc3	98	53.045	ENSDORG00000027343	Rnpc3	95	53.600	Dipodomys_ordii
ENSKMAG00000017358	rnpc3	56	38.889	FBgn0265184	CG44249	67	38.889	Drosophila_melanogaster
ENSKMAG00000017358	rnpc3	98	49.225	ENSEBUG00000002068	rnpc3	97	48.356	Eptatretus_burgeri
ENSKMAG00000017358	rnpc3	97	54.871	ENSEASG00005015957	RNPC3	95	55.466	Equus_asinus_asinus
ENSKMAG00000017358	rnpc3	97	54.871	ENSECAG00000021148	RNPC3	95	55.466	Equus_caballus
ENSKMAG00000017358	rnpc3	99	67.754	ENSELUG00000002264	rnpc3	99	65.962	Esox_lucius
ENSKMAG00000017358	rnpc3	98	54.563	ENSFCAG00000024312	RNPC3	95	54.527	Felis_catus
ENSKMAG00000017358	rnpc3	89	56.291	ENSFALG00000002580	RNPC3	99	56.291	Ficedula_albicollis
ENSKMAG00000017358	rnpc3	97	53.373	ENSFDAG00000019948	RNPC3	95	53.939	Fukomys_damarensis
ENSKMAG00000017358	rnpc3	99	76.459	ENSFHEG00000020647	rnpc3	99	77.016	Fundulus_heteroclitus
ENSKMAG00000017358	rnpc3	99	71.313	ENSGMOG00000019213	rnpc3	98	71.255	Gadus_morhua
ENSKMAG00000017358	rnpc3	98	55.600	ENSGALG00000005162	RNPC3	89	55.689	Gallus_gallus
ENSKMAG00000017358	rnpc3	99	79.406	ENSGAFG00000017236	rnpc3	99	80.198	Gambusia_affinis
ENSKMAG00000017358	rnpc3	99	78.685	ENSGACG00000002048	rnpc3	99	77.734	Gasterosteus_aculeatus
ENSKMAG00000017358	rnpc3	97	57.085	ENSGAGG00000008438	RNPC3	95	56.800	Gopherus_agassizii
ENSKMAG00000017358	rnpc3	98	46.450	ENSGGOG00000026201	-	94	48.163	Gorilla_gorilla
ENSKMAG00000017358	rnpc3	83	83.673	ENSHBUG00000015966	rnpc3	85	83.673	Haplochromis_burtoni
ENSKMAG00000017358	rnpc3	97	52.976	ENSHGLG00000001708	RNPC3	95	53.535	Heterocephalus_glaber_female
ENSKMAG00000017358	rnpc3	97	52.976	ENSHGLG00100003005	RNPC3	95	53.535	Heterocephalus_glaber_male
ENSKMAG00000017358	rnpc3	99	74.111	ENSHCOG00000017135	rnpc3	99	74.751	Hippocampus_comes
ENSKMAG00000017358	rnpc3	99	65.000	ENSIPUG00000002916	rnpc3	99	64.811	Ictalurus_punctatus
ENSKMAG00000017358	rnpc3	97	53.465	ENSSTOG00000025020	RNPC3	95	54.032	Ictidomys_tridecemlineatus
ENSKMAG00000017358	rnpc3	97	52.695	ENSJJAG00000010203	Rnpc3	96	53.659	Jaculus_jaculus
ENSKMAG00000017358	rnpc3	99	78.373	ENSLBEG00000024901	rnpc3	97	78.373	Labrus_bergylta
ENSKMAG00000017358	rnpc3	99	56.746	ENSLACG00000005720	RNPC3	92	56.548	Latimeria_chalumnae
ENSKMAG00000017358	rnpc3	99	62.425	ENSLOCG00000007986	rnpc3	99	61.858	Lepisosteus_oculatus
ENSKMAG00000017358	rnpc3	97	53.678	ENSLAFG00000032342	RNPC3	95	55.466	Loxodonta_africana
ENSKMAG00000017358	rnpc3	98	40.650	ENSMFAG00000002917	-	94	41.996	Macaca_fascicularis
ENSKMAG00000017358	rnpc3	97	54.851	ENSMFAG00000002004	RNPC3	94	55.444	Macaca_fascicularis
ENSKMAG00000017358	rnpc3	97	54.653	ENSMMUG00000018039	RNPC3	94	55.242	Macaca_mulatta
ENSKMAG00000017358	rnpc3	82	50.459	ENSMMUG00000002098	-	90	47.753	Macaca_mulatta
ENSKMAG00000017358	rnpc3	98	40.619	ENSMNEG00000029209	-	94	41.580	Macaca_nemestrina
ENSKMAG00000017358	rnpc3	97	51.683	ENSMNEG00000033950	RNPC3	94	52.218	Macaca_nemestrina
ENSKMAG00000017358	rnpc3	97	54.851	ENSMLEG00000033628	RNPC3	94	55.444	Mandrillus_leucophaeus
ENSKMAG00000017358	rnpc3	98	41.968	ENSMLEG00000034644	-	95	41.483	Mandrillus_leucophaeus
ENSKMAG00000017358	rnpc3	99	71.881	ENSMAMG00000007496	rnpc3	99	71.881	Mastacembelus_armatus
ENSKMAG00000017358	rnpc3	100	78.016	ENSMZEG00005020233	rnpc3	100	78.405	Maylandia_zebra
ENSKMAG00000017358	rnpc3	89	55.165	ENSMGAG00000006381	RNPC3	99	55.165	Meleagris_gallopavo
ENSKMAG00000017358	rnpc3	97	52.286	ENSMAUG00000001358	Rnpc3	95	54.453	Mesocricetus_auratus
ENSKMAG00000017358	rnpc3	97	54.365	ENSMICG00000029591	RNPC3	95	54.949	Microcebus_murinus
ENSKMAG00000017358	rnpc3	97	53.175	ENSMOCG00000013423	Rnpc3	94	55.828	Microtus_ochrogaster
ENSKMAG00000017358	rnpc3	99	74.390	ENSMMOG00000005309	rnpc3	99	75.203	Mola_mola
ENSKMAG00000017358	rnpc3	98	54.637	ENSMODG00000002946	RNPC3	95	54.910	Monodelphis_domestica
ENSKMAG00000017358	rnpc3	99	73.413	ENSMALG00000015471	rnpc3	99	73.611	Monopterus_albus
ENSKMAG00000017358	rnpc3	97	52.789	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.970	Mus_caroli
ENSKMAG00000017358	rnpc3	97	52.579	ENSMUSG00000027981	Rnpc3	99	52.891	Mus_musculus
ENSKMAG00000017358	rnpc3	98	52.174	MGP_PahariEiJ_G0027001	Rnpc3	97	54.326	Mus_pahari
ENSKMAG00000017358	rnpc3	97	52.381	MGP_SPRETEiJ_G0026505	Rnpc3	96	54.545	Mus_spretus
ENSKMAG00000017358	rnpc3	97	54.382	ENSMPUG00000007349	RNPC3	95	54.970	Mustela_putorius_furo
ENSKMAG00000017358	rnpc3	97	52.600	ENSMLUG00000028743	RNPC3	95	54.786	Myotis_lucifugus
ENSKMAG00000017358	rnpc3	97	53.861	ENSNGAG00000010939	Rnpc3	95	54.435	Nannospalax_galili
ENSKMAG00000017358	rnpc3	100	80.040	ENSNBRG00000012196	rnpc3	96	80.439	Neolamprologus_brichardi
ENSKMAG00000017358	rnpc3	98	54.635	ENSNLEG00000012013	RNPC3	95	55.556	Nomascus_leucogenys
ENSKMAG00000017358	rnpc3	97	54.291	ENSODEG00000007612	RNPC3	95	54.175	Octodon_degus
ENSKMAG00000017358	rnpc3	100	79.528	ENSONIG00000004770	rnpc3	100	80.533	Oreochromis_niloticus
ENSKMAG00000017358	rnpc3	93	56.596	ENSOANG00000008220	RNPC3	100	56.596	Ornithorhynchus_anatinus
ENSKMAG00000017358	rnpc3	97	54.949	ENSOCUG00000004016	RNPC3	95	54.343	Oryctolagus_cuniculus
ENSKMAG00000017358	rnpc3	99	75.000	ENSORLG00000005694	rnpc3	99	77.000	Oryzias_latipes
ENSKMAG00000017358	rnpc3	99	76.000	ENSORLG00020005513	rnpc3	99	78.000	Oryzias_latipes_hni
ENSKMAG00000017358	rnpc3	99	75.400	ENSORLG00015002179	rnpc3	99	77.400	Oryzias_latipes_hsok
ENSKMAG00000017358	rnpc3	99	75.000	ENSOMEG00000017737	rnpc3	99	78.200	Oryzias_melastigma
ENSKMAG00000017358	rnpc3	97	54.672	ENSOGAG00000026182	RNPC3	95	55.263	Otolemur_garnettii
ENSKMAG00000017358	rnpc3	97	56.162	ENSOARG00000018719	RNPC3	95	55.354	Ovis_aries
ENSKMAG00000017358	rnpc3	99	46.169	ENSPPAG00000030278	-	97	48.081	Pan_paniscus
ENSKMAG00000017358	rnpc3	98	54.813	ENSPPAG00000037459	RNPC3	95	55.734	Pan_paniscus
ENSKMAG00000017358	rnpc3	98	55.050	ENSPPRG00000020246	RNPC3	95	55.645	Panthera_pardus
ENSKMAG00000017358	rnpc3	98	55.050	ENSPTIG00000009887	RNPC3	97	55.645	Panthera_tigris_altaica
ENSKMAG00000017358	rnpc3	98	54.528	ENSPTRG00000033902	RNPC3	95	55.444	Pan_troglodytes
ENSKMAG00000017358	rnpc3	99	45.968	ENSPTRG00000044227	-	97	47.879	Pan_troglodytes
ENSKMAG00000017358	rnpc3	98	44.466	ENSPANG00000029957	-	96	43.232	Papio_anubis
ENSKMAG00000017358	rnpc3	97	54.960	ENSPANG00000012137	RNPC3	94	55.556	Papio_anubis
ENSKMAG00000017358	rnpc3	99	65.209	ENSPKIG00000008828	rnpc3	98	64.683	Paramormyrops_kingsleyae
ENSKMAG00000017358	rnpc3	64	53.049	ENSPSIG00000007396	RNPC3	99	53.049	Pelodiscus_sinensis
ENSKMAG00000017358	rnpc3	97	65.102	ENSPMGG00000011742	rnpc3	97	64.286	Periophthalmus_magnuspinnatus
ENSKMAG00000017358	rnpc3	92	48.857	ENSPEMG00000020112	Rnpc3	99	52.298	Peromyscus_maniculatus_bairdii
ENSKMAG00000017358	rnpc3	96	44.272	ENSPMAG00000003778	rnpc3	95	44.094	Petromyzon_marinus
ENSKMAG00000017358	rnpc3	97	55.172	ENSPCIG00000004415	-	95	55.444	Phascolarctos_cinereus
ENSKMAG00000017358	rnpc3	99	80.318	ENSPFOG00000009895	rnpc3	99	80.716	Poecilia_formosa
ENSKMAG00000017358	rnpc3	99	80.318	ENSPLAG00000012023	rnpc3	99	80.716	Poecilia_latipinna
ENSKMAG00000017358	rnpc3	99	80.517	ENSPMEG00000003663	rnpc3	99	80.915	Poecilia_mexicana
ENSKMAG00000017358	rnpc3	99	79.523	ENSPREG00000010206	rnpc3	99	79.920	Poecilia_reticulata
ENSKMAG00000017358	rnpc3	81	49.882	ENSPPYG00000001102	RNPC3	94	50.483	Pongo_abelii
ENSKMAG00000017358	rnpc3	100	79.441	ENSPNYG00000020603	rnpc3	99	79.840	Pundamilia_nyererei
ENSKMAG00000017358	rnpc3	97	51.984	ENSRNOG00000017310	Rnpc3	95	54.158	Rattus_norvegicus
ENSKMAG00000017358	rnpc3	97	51.186	ENSRBIG00000043897	RNPC3	94	51.710	Rhinopithecus_bieti
ENSKMAG00000017358	rnpc3	97	54.851	ENSRROG00000032334	RNPC3	94	55.444	Rhinopithecus_roxellana
ENSKMAG00000017358	rnpc3	98	54.438	ENSSBOG00000024473	RNPC3	95	55.354	Saimiri_boliviensis_boliviensis
ENSKMAG00000017358	rnpc3	98	53.226	ENSSHAG00000011859	RNPC3	96	55.110	Sarcophilus_harrisii
ENSKMAG00000017358	rnpc3	99	68.663	ENSSFOG00015013055	rnpc3	99	68.443	Scleropages_formosus
ENSKMAG00000017358	rnpc3	99	72.070	ENSSMAG00000020346	rnpc3	99	76.758	Scophthalmus_maximus
ENSKMAG00000017358	rnpc3	99	78.824	ENSSDUG00000006600	rnpc3	99	79.216	Seriola_dumerili
ENSKMAG00000017358	rnpc3	99	78.824	ENSSLDG00000007979	rnpc3	99	79.216	Seriola_lalandi_dorsalis
ENSKMAG00000017358	rnpc3	96	50.598	ENSSPUG00000008539	-	92	55.624	Sphenodon_punctatus
ENSKMAG00000017358	rnpc3	97	46.032	ENSSPUG00000003872	-	92	50.615	Sphenodon_punctatus
ENSKMAG00000017358	rnpc3	99	82.077	ENSSPAG00000005633	rnpc3	99	81.874	Stegastes_partitus
ENSKMAG00000017358	rnpc3	97	54.582	ENSSSCG00000037254	RNPC3	95	55.375	Sus_scrofa
ENSKMAG00000017358	rnpc3	89	56.388	ENSTGUG00000004795	-	99	53.744	Taeniopygia_guttata
ENSKMAG00000017358	rnpc3	99	75.050	ENSTNIG00000018963	rnpc3	99	73.453	Tetraodon_nigroviridis
ENSKMAG00000017358	rnpc3	97	54.365	ENSUMAG00000007775	RNPC3	97	54.949	Ursus_maritimus
ENSKMAG00000017358	rnpc3	97	54.365	ENSVVUG00000000331	RNPC3	95	54.949	Vulpes_vulpes
ENSKMAG00000017358	rnpc3	97	45.309	ENSXETG00000025027	rnpc3	96	43.359	Xenopus_tropicalis
ENSKMAG00000017358	rnpc3	54	82.642	ENSXCOG00000005013	rnpc3	99	79.684	Xiphophorus_couchianus
ENSKMAG00000017358	rnpc3	99	79.406	ENSXMAG00000006495	rnpc3	99	80.198	Xiphophorus_maculatus