EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017397 (Gene tree)
Gene ID: 108230922
Gene Symbol: exosc2
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome component 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4159 bases
Position: chrLWHD01000010.1:5749130-5753288
Accession: 108230922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023491	ECR1_N	PF14382.6	5.1e-17	1	1
ENSKMAP00000023472	ECR1_N	PF14382.6	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023790	-	1331	-	ENSKMAP00000023491	267 (aa)	-	UPI0007F86D54
ENSKMAT00000023771	-	1400	XM_017407552	ENSKMAP00000023472	290 (aa)	XP_017263041	UPI0007F8EAB7

Gene Model

Click here to download ENSKMAG00000017397's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017397	exosc2	99	77.397	ENSG00000130713	EXOSC2	99	77.397	Homo_sapiens
ENSKMAG00000017397	exosc2	91	95.076	ENSAPOG00000008861	exosc2	96	95.076	Acanthochromis_polyacanthus
ENSKMAG00000017397	exosc2	99	77.055	ENSAMEG00000016239	EXOSC2	99	77.055	Ailuropoda_melanoleuca
ENSKMAG00000017397	exosc2	99	94.863	ENSACIG00000019054	exosc2	99	94.863	Amphilophus_citrinellus
ENSKMAG00000017397	exosc2	99	94.521	ENSAOCG00000004983	exosc2	99	94.521	Amphiprion_ocellaris
ENSKMAG00000017397	exosc2	99	94.521	ENSAOCG00000008577	exosc2	99	94.521	Amphiprion_ocellaris
ENSKMAG00000017397	exosc2	99	94.521	ENSAPEG00000014088	exosc2	99	94.521	Amphiprion_percula
ENSKMAG00000017397	exosc2	99	94.863	ENSATEG00000018680	exosc2	99	94.863	Anabas_testudineus
ENSKMAG00000017397	exosc2	97	77.700	ENSAPLG00000012516	EXOSC2	99	77.700	Anas_platyrhynchos
ENSKMAG00000017397	exosc2	99	75.694	ENSACAG00000002706	EXOSC2	98	75.694	Anolis_carolinensis
ENSKMAG00000017397	exosc2	99	94.178	ENSACLG00000013613	exosc2	99	94.178	Astatotilapia_calliptera
ENSKMAG00000017397	exosc2	99	86.054	ENSAMXG00000042605	exosc2	99	86.054	Astyanax_mexicanus
ENSKMAG00000017397	exosc2	99	77.397	ENSBTAG00000048071	EXOSC2	99	77.397	Bos_taurus
ENSKMAG00000017397	exosc2	93	42.857	WBGene00022232	exos-2	90	42.857	Caenorhabditis_elegans
ENSKMAG00000017397	exosc2	99	77.397	ENSCJAG00000020537	EXOSC2	99	77.397	Callithrix_jacchus
ENSKMAG00000017397	exosc2	99	76.027	ENSCAFG00000019941	EXOSC2	99	76.027	Canis_familiaris
ENSKMAG00000017397	exosc2	99	76.027	ENSCAFG00020024047	EXOSC2	99	76.027	Canis_lupus_dingo
ENSKMAG00000017397	exosc2	99	77.055	ENSCHIG00000021398	EXOSC2	99	77.055	Capra_hircus
ENSKMAG00000017397	exosc2	99	76.027	ENSTSYG00000001805	EXOSC2	99	76.027	Carlito_syrichta
ENSKMAG00000017397	exosc2	99	73.630	ENSCPOG00000005902	EXOSC2	99	73.630	Cavia_porcellus
ENSKMAG00000017397	exosc2	99	77.397	ENSCCAG00000019749	EXOSC2	99	77.397	Cebus_capucinus
ENSKMAG00000017397	exosc2	99	77.397	ENSCATG00000025389	-	99	77.397	Cercocebus_atys
ENSKMAG00000017397	exosc2	99	76.712	ENSCLAG00000006195	EXOSC2	99	76.712	Chinchilla_lanigera
ENSKMAG00000017397	exosc2	99	77.397	ENSCSAG00000014760	EXOSC2	99	77.397	Chlorocebus_sabaeus
ENSKMAG00000017397	exosc2	99	76.027	ENSCHOG00000000858	EXOSC2	99	76.027	Choloepus_hoffmanni
ENSKMAG00000017397	exosc2	99	76.289	ENSCPBG00000022626	EXOSC2	99	76.289	Chrysemys_picta_bellii
ENSKMAG00000017397	exosc2	89	66.288	ENSCING00000014934	-	87	66.288	Ciona_intestinalis
ENSKMAG00000017397	exosc2	92	65.328	ENSCSAVG00000003684	-	100	65.328	Ciona_savignyi
ENSKMAG00000017397	exosc2	99	71.134	ENSCANG00000029298	-	99	71.134	Colobus_angolensis_palliatus
ENSKMAG00000017397	exosc2	99	77.397	ENSCANG00000039828	-	99	77.397	Colobus_angolensis_palliatus
ENSKMAG00000017397	exosc2	99	76.370	ENSCGRG00001013981	Exosc2	99	76.370	Cricetulus_griseus_chok1gshd
ENSKMAG00000017397	exosc2	99	76.370	ENSCGRG00000017629	Exosc2	99	76.370	Cricetulus_griseus_crigri
ENSKMAG00000017397	exosc2	99	92.414	ENSCSEG00000016539	exosc2	99	92.414	Cynoglossus_semilaevis
ENSKMAG00000017397	exosc2	99	95.205	ENSCVAG00000022260	exosc2	99	95.205	Cyprinodon_variegatus
ENSKMAG00000017397	exosc2	99	80.952	ENSDARG00000028688	exosc2	99	80.952	Danio_rerio
ENSKMAG00000017397	exosc2	91	77.154	ENSDNOG00000025767	-	100	77.154	Dasypus_novemcinctus
ENSKMAG00000017397	exosc2	99	77.740	ENSDORG00000009238	Exosc2	99	77.740	Dipodomys_ordii
ENSKMAG00000017397	exosc2	90	61.832	FBgn0034879	Rrp4	97	58.681	Drosophila_melanogaster
ENSKMAG00000017397	exosc2	93	64.815	ENSETEG00000016130	-	97	64.815	Echinops_telfairi
ENSKMAG00000017397	exosc2	99	76.712	ENSEASG00005008475	EXOSC2	86	76.712	Equus_asinus_asinus
ENSKMAG00000017397	exosc2	99	76.712	ENSECAG00000007897	EXOSC2	86	76.712	Equus_caballus
ENSKMAG00000017397	exosc2	99	89.796	ENSELUG00000013641	exosc2	99	89.796	Esox_lucius
ENSKMAG00000017397	exosc2	99	77.397	ENSFCAG00000025936	EXOSC2	99	77.397	Felis_catus
ENSKMAG00000017397	exosc2	99	75.258	ENSFALG00000001446	EXOSC2	99	75.258	Ficedula_albicollis
ENSKMAG00000017397	exosc2	99	75.685	ENSFDAG00000017196	EXOSC2	99	75.685	Fukomys_damarensis
ENSKMAG00000017397	exosc2	99	95.548	ENSFHEG00000018571	exosc2	99	95.548	Fundulus_heteroclitus
ENSKMAG00000017397	exosc2	99	86.644	ENSGMOG00000011785	exosc2	99	86.644	Gadus_morhua
ENSKMAG00000017397	exosc2	99	78.351	ENSGALG00000040373	EXOSC2	99	78.351	Gallus_gallus
ENSKMAG00000017397	exosc2	100	94.881	ENSGAFG00000010283	exosc2	100	94.881	Gambusia_affinis
ENSKMAG00000017397	exosc2	99	92.123	ENSGACG00000016805	exosc2	99	92.169	Gasterosteus_aculeatus
ENSKMAG00000017397	exosc2	90	78.327	ENSGAGG00000021026	EXOSC2	99	78.327	Gopherus_agassizii
ENSKMAG00000017397	exosc2	99	76.712	ENSGGOG00000010578	EXOSC2	99	76.712	Gorilla_gorilla
ENSKMAG00000017397	exosc2	99	94.521	ENSHBUG00000022437	exosc2	99	94.521	Haplochromis_burtoni
ENSKMAG00000017397	exosc2	99	76.712	ENSHGLG00000012834	EXOSC2	99	76.712	Heterocephalus_glaber_female
ENSKMAG00000017397	exosc2	99	76.712	ENSHGLG00100007092	EXOSC2	99	76.712	Heterocephalus_glaber_male
ENSKMAG00000017397	exosc2	99	90.753	ENSHCOG00000019130	exosc2	99	90.753	Hippocampus_comes
ENSKMAG00000017397	exosc2	99	84.983	ENSIPUG00000015397	exosc2	99	84.983	Ictalurus_punctatus
ENSKMAG00000017397	exosc2	99	76.712	ENSSTOG00000005999	EXOSC2	99	76.712	Ictidomys_tridecemlineatus
ENSKMAG00000017397	exosc2	99	76.370	ENSJJAG00000003188	Exosc2	99	76.370	Jaculus_jaculus
ENSKMAG00000017397	exosc2	99	92.150	ENSLBEG00000019269	exosc2	99	92.150	Labrus_bergylta
ENSKMAG00000017397	exosc2	99	79.522	ENSLACG00000015530	EXOSC2	99	79.522	Latimeria_chalumnae
ENSKMAG00000017397	exosc2	99	76.792	ENSLAFG00000006984	EXOSC2	99	76.792	Loxodonta_africana
ENSKMAG00000017397	exosc2	99	77.397	ENSMFAG00000000597	-	99	77.397	Macaca_fascicularis
ENSKMAG00000017397	exosc2	99	66.438	ENSMFAG00000034160	-	84	66.438	Macaca_fascicularis
ENSKMAG00000017397	exosc2	99	74.721	ENSMMUG00000012498	EXOSC2	99	74.721	Macaca_mulatta
ENSKMAG00000017397	exosc2	99	67.123	ENSMNEG00000028704	-	91	67.123	Macaca_nemestrina
ENSKMAG00000017397	exosc2	99	77.397	ENSMNEG00000031861	-	99	77.397	Macaca_nemestrina
ENSKMAG00000017397	exosc2	99	67.123	ENSMLEG00000029891	-	91	67.123	Mandrillus_leucophaeus
ENSKMAG00000017397	exosc2	99	77.397	ENSMLEG00000042587	-	99	77.397	Mandrillus_leucophaeus
ENSKMAG00000017397	exosc2	99	94.521	ENSMAMG00000012466	exosc2	99	94.521	Mastacembelus_armatus
ENSKMAG00000017397	exosc2	99	93.493	ENSMZEG00005018737	exosc2	99	93.493	Maylandia_zebra
ENSKMAG00000017397	exosc2	99	78.007	ENSMGAG00000005450	EXOSC2	99	78.007	Meleagris_gallopavo
ENSKMAG00000017397	exosc2	99	76.370	ENSMAUG00000008299	Exosc2	99	76.370	Mesocricetus_auratus
ENSKMAG00000017397	exosc2	99	77.397	ENSMICG00000015495	EXOSC2	99	77.397	Microcebus_murinus
ENSKMAG00000017397	exosc2	99	76.712	ENSMOCG00000008262	Exosc2	99	76.712	Microtus_ochrogaster
ENSKMAG00000017397	exosc2	99	93.836	ENSMMOG00000009616	exosc2	99	93.836	Mola_mola
ENSKMAG00000017397	exosc2	99	77.740	ENSMODG00000012114	EXOSC2	99	77.740	Monodelphis_domestica
ENSKMAG00000017397	exosc2	99	94.863	ENSMALG00000022132	exosc2	99	94.863	Monopterus_albus
ENSKMAG00000017397	exosc2	99	76.027	MGP_CAROLIEiJ_G0023415	Exosc2	99	76.027	Mus_caroli
ENSKMAG00000017397	exosc2	99	76.027	ENSMUSG00000039356	Exosc2	99	76.027	Mus_musculus
ENSKMAG00000017397	exosc2	99	75.685	MGP_PahariEiJ_G0024872	Exosc2	99	75.685	Mus_pahari
ENSKMAG00000017397	exosc2	99	76.027	MGP_SPRETEiJ_G0024332	Exosc2	99	76.027	Mus_spretus
ENSKMAG00000017397	exosc2	99	76.370	ENSMPUG00000012686	EXOSC2	99	76.370	Mustela_putorius_furo
ENSKMAG00000017397	exosc2	99	76.871	ENSMLUG00000008776	EXOSC2	99	76.871	Myotis_lucifugus
ENSKMAG00000017397	exosc2	99	76.712	ENSNGAG00000019383	Exosc2	99	76.712	Nannospalax_galili
ENSKMAG00000017397	exosc2	99	93.836	ENSNBRG00000005453	exosc2	99	93.836	Neolamprologus_brichardi
ENSKMAG00000017397	exosc2	99	77.397	ENSNLEG00000012533	EXOSC2	99	77.397	Nomascus_leucogenys
ENSKMAG00000017397	exosc2	100	61.092	ENSMEUG00000000795	EXOSC2	100	61.092	Notamacropus_eugenii
ENSKMAG00000017397	exosc2	56	79.394	ENSOPRG00000008688	EXOSC2	56	79.394	Ochotona_princeps
ENSKMAG00000017397	exosc2	99	76.027	ENSODEG00000016880	-	99	76.027	Octodon_degus
ENSKMAG00000017397	exosc2	87	78.656	ENSODEG00000019513	-	99	78.656	Octodon_degus
ENSKMAG00000017397	exosc2	99	93.836	ENSONIG00000014086	exosc2	99	93.836	Oreochromis_niloticus
ENSKMAG00000017397	exosc2	99	73.630	ENSOANG00000001044	EXOSC2	99	73.630	Ornithorhynchus_anatinus
ENSKMAG00000017397	exosc2	99	77.397	ENSOCUG00000007138	EXOSC2	99	77.397	Oryctolagus_cuniculus
ENSKMAG00000017397	exosc2	99	92.808	ENSORLG00000007443	exosc2	99	92.808	Oryzias_latipes
ENSKMAG00000017397	exosc2	99	92.466	ENSORLG00020018902	exosc2	99	92.466	Oryzias_latipes_hni
ENSKMAG00000017397	exosc2	99	92.123	ENSORLG00015006767	exosc2	99	92.123	Oryzias_latipes_hsok
ENSKMAG00000017397	exosc2	99	92.808	ENSOMEG00000003533	exosc2	99	92.808	Oryzias_melastigma
ENSKMAG00000017397	exosc2	99	76.712	ENSOGAG00000007558	EXOSC2	99	76.712	Otolemur_garnettii
ENSKMAG00000017397	exosc2	99	76.871	ENSOARG00000007438	EXOSC2	99	76.871	Ovis_aries
ENSKMAG00000017397	exosc2	99	77.397	ENSPPAG00000034796	EXOSC2	99	77.397	Pan_paniscus
ENSKMAG00000017397	exosc2	99	77.740	ENSPPRG00000001089	EXOSC2	99	77.740	Panthera_pardus
ENSKMAG00000017397	exosc2	99	77.740	ENSPTIG00000021163	EXOSC2	99	77.740	Panthera_tigris_altaica
ENSKMAG00000017397	exosc2	99	77.397	ENSPTRG00000021476	EXOSC2	99	77.397	Pan_troglodytes
ENSKMAG00000017397	exosc2	99	77.397	ENSPTRG00000045766	-	99	77.397	Pan_troglodytes
ENSKMAG00000017397	exosc2	99	77.397	ENSPANG00000025966	EXOSC2	99	77.397	Papio_anubis
ENSKMAG00000017397	exosc2	98	84.561	ENSPKIG00000004271	exosc2	98	84.561	Paramormyrops_kingsleyae
ENSKMAG00000017397	exosc2	99	75.601	ENSPSIG00000006743	EXOSC2	99	75.601	Pelodiscus_sinensis
ENSKMAG00000017397	exosc2	88	95.669	ENSPMGG00000010980	exosc2	100	95.669	Periophthalmus_magnuspinnatus
ENSKMAG00000017397	exosc2	99	76.712	ENSPEMG00000006345	Exosc2	99	76.712	Peromyscus_maniculatus_bairdii
ENSKMAG00000017397	exosc2	99	74.830	ENSPMAG00000001280	exosc2	99	74.830	Petromyzon_marinus
ENSKMAG00000017397	exosc2	99	77.397	ENSPCIG00000024122	EXOSC2	97	77.397	Phascolarctos_cinereus
ENSKMAG00000017397	exosc2	100	95.238	ENSPFOG00000019819	exosc2	100	95.238	Poecilia_formosa
ENSKMAG00000017397	exosc2	100	95.563	ENSPLAG00000004605	exosc2	100	95.563	Poecilia_latipinna
ENSKMAG00000017397	exosc2	100	95.563	ENSPMEG00000010976	exosc2	100	95.563	Poecilia_mexicana
ENSKMAG00000017397	exosc2	100	95.904	ENSPREG00000014306	exosc2	100	95.904	Poecilia_reticulata
ENSKMAG00000017397	exosc2	99	77.397	ENSPPYG00000019695	EXOSC2	99	77.397	Pongo_abelii
ENSKMAG00000017397	exosc2	99	77.740	ENSPCAG00000013400	EXOSC2	99	77.740	Procavia_capensis
ENSKMAG00000017397	exosc2	99	77.055	ENSPCOG00000017639	EXOSC2	99	77.055	Propithecus_coquereli
ENSKMAG00000017397	exosc2	99	76.370	ENSPVAG00000001513	EXOSC2	99	76.370	Pteropus_vampyrus
ENSKMAG00000017397	exosc2	99	94.521	ENSPNYG00000007383	exosc2	99	94.521	Pundamilia_nyererei
ENSKMAG00000017397	exosc2	99	86.395	ENSPNAG00000014281	exosc2	99	86.395	Pygocentrus_nattereri
ENSKMAG00000017397	exosc2	99	76.712	ENSRNOG00000009245	Exosc2	99	76.712	Rattus_norvegicus
ENSKMAG00000017397	exosc2	99	71.478	ENSRBIG00000029791	-	99	71.478	Rhinopithecus_bieti
ENSKMAG00000017397	exosc2	99	77.397	ENSRBIG00000031203	-	99	77.397	Rhinopithecus_bieti
ENSKMAG00000017397	exosc2	99	70.790	ENSRROG00000043609	-	99	70.790	Rhinopithecus_roxellana
ENSKMAG00000017397	exosc2	99	77.397	ENSRROG00000010827	-	99	77.397	Rhinopithecus_roxellana
ENSKMAG00000017397	exosc2	97	40.938	YHR069C	-	89	40.938	Saccharomyces_cerevisiae
ENSKMAG00000017397	exosc2	99	77.055	ENSSBOG00000022712	EXOSC2	99	77.055	Saimiri_boliviensis_boliviensis
ENSKMAG00000017397	exosc2	99	77.740	ENSSHAG00000016050	EXOSC2	99	77.740	Sarcophilus_harrisii
ENSKMAG00000017397	exosc2	99	84.828	ENSSFOG00015011245	exosc2	99	84.828	Scleropages_formosus
ENSKMAG00000017397	exosc2	99	93.793	ENSSMAG00000003112	exosc2	99	93.793	Scophthalmus_maximus
ENSKMAG00000017397	exosc2	99	93.857	ENSSDUG00000004634	exosc2	99	93.857	Seriola_dumerili
ENSKMAG00000017397	exosc2	99	94.828	ENSSLDG00000010616	exosc2	99	94.828	Seriola_lalandi_dorsalis
ENSKMAG00000017397	exosc2	99	76.190	ENSSPUG00000013391	EXOSC2	99	76.190	Sphenodon_punctatus
ENSKMAG00000017397	exosc2	99	94.521	ENSSPAG00000022947	exosc2	99	94.521	Stegastes_partitus
ENSKMAG00000017397	exosc2	99	77.740	ENSSSCG00000005704	EXOSC2	99	77.740	Sus_scrofa
ENSKMAG00000017397	exosc2	99	75.258	ENSTGUG00000004697	EXOSC2	99	75.258	Taeniopygia_guttata
ENSKMAG00000017397	exosc2	99	85.274	ENSTRUG00000022436	exosc2	99	85.274	Takifugu_rubripes
ENSKMAG00000017397	exosc2	99	72.260	ENSTTRG00000015159	EXOSC2	99	72.260	Tursiops_truncatus
ENSKMAG00000017397	exosc2	94	75.451	ENSUAMG00000009651	EXOSC2	99	75.451	Ursus_americanus
ENSKMAG00000017397	exosc2	99	77.055	ENSUMAG00000018726	EXOSC2	99	77.055	Ursus_maritimus
ENSKMAG00000017397	exosc2	99	76.027	ENSVVUG00000027665	EXOSC2	99	76.027	Vulpes_vulpes
ENSKMAG00000017397	exosc2	99	76.712	ENSXETG00000001340	exosc2	99	76.712	Xenopus_tropicalis
ENSKMAG00000017397	exosc2	100	96.246	ENSXMAG00000005265	exosc2	100	96.246	Xiphophorus_maculatus