EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000017417 (Gene tree)
Gene ID
108245972
Gene Symbol
-
Alias
RAB5CL|RABL
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
6690 bases
Position
chrLWHD01000005.1:6518391-6525080
Accession
108245972
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000023486MMR_HSR1PF01926.230.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000023785-3366XM_017433257ENSKMAP00000023486220 (aa)XP_017288746UPI0007F93DDE
Gene Model
Click here to download ENSKMAG00000017417's gene model file
Pathways
Pathway IDPathway NameSource
kmr04144EndocytosisKEGG
kmr04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017417's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000017417-7436.810ENSKMAG00000018973-7436.810
ENSKMAG00000017417-7447.239ENSKMAG00000009033rab11bb7547.239
ENSKMAG00000017417-7532.121ENSKMAG00000003938kras8831.737
ENSKMAG00000017417-9044.231ENSKMAG00000004945rab25a9544.231
ENSKMAG00000017417-9339.706ENSKMAG00000015488rab25b9739.706
ENSKMAG00000017417-7447.239ENSKMAG00000011905rab11a7647.239
ENSKMAG00000017417-6637.086ENSKMAG00000020034-5137.086
ENSKMAG00000017417-9991.781ENSKMAG00000020038rab5c9991.781
ENSKMAG00000017417-7753.529ENSKMAG00000014705rab22a8853.529
ENSKMAG00000017417-8042.857ENSKMAG00000002545-8342.857
ENSKMAG00000017417-7331.737ENSKMAG00000017150-7431.737
ENSKMAG00000017417-8830.049ENSKMAG00000019341rab34b8130.049
ENSKMAG00000017417-7333.750ENSKMAG00000018270rab237334.884
ENSKMAG00000017417-7447.239ENSKMAG00000006170-7547.239
ENSKMAG00000017417-8131.111ENSKMAG00000020448rheb9631.111
ENSKMAG00000017417-8933.663ENSKMAG00000003646-9733.663
ENSKMAG00000017417-7340.373ENSKMAG00000020392rab157640.373
ENSKMAG00000017417-8937.949ENSKMAG00000006854rab35b9637.949
ENSKMAG00000017417-9033.953ENSKMAG00000012778si:dkey-34d22.59633.953
ENSKMAG00000017417-7147.771ENSKMAG00000015516rab11al7347.771
ENSKMAG00000017417-6632.877ENSKMAG00000003080si:cabz01085950.17232.877
ENSKMAG00000017417-7638.372ENSKMAG00000020056rab127238.372
ENSKMAG00000017417-7331.056ENSKMAG00000020733rras8131.056
ENSKMAG00000017417-8741.361ENSKMAG00000009856zgc:1719278541.361
ENSKMAG00000017417-8639.683ENSKMAG00000017487rab148739.683
ENSKMAG00000017417-8942.564ENSKMAG00000014038-9242.564
ENSKMAG00000017417-8831.633ENSKMAG00000012723rabl28631.633
ENSKMAG00000017417-7539.766ENSKMAG00000002862zgc:1015597339.766
ENSKMAG00000017417-7340.741ENSKMAG00000012657-7340.741
ENSKMAG00000017417-9982.488ENSKMAG00000005111rab5aa9982.488
ENSKMAG00000017417-8835.266ENSKMAG00000003105rab33ba8835.266
ENSKMAG00000017417-9141.827ENSKMAG00000007364rab18b9641.827
ENSKMAG00000017417-8838.144ENSKMAG00000001908rab139538.144
ENSKMAG00000017417-7447.239ENSKMAG00000006082-7547.239
ENSKMAG00000017417-9339.216ENSKMAG00000015507rab6ba9839.216
ENSKMAG00000017417-7337.952ENSKMAG00000006593rab33a7837.952
ENSKMAG00000017417-8942.051ENSKMAG00000017357rab1ab9642.051
ENSKMAG00000017417-7334.146ENSKMAG00000021039si:dkey-13a21.46834.146
ENSKMAG00000017417-7435.976ENSKMAG00000007267rab42a7535.976
ENSKMAG00000017417-7243.671ENSKMAG00000013146-8243.671
ENSKMAG00000017417-8834.158ENSKMAG00000019964rab9b9734.158
ENSKMAG00000017417-7137.195ENSKMAG00000017662rab9a7937.195
ENSKMAG00000017417-7239.623ENSKMAG00000001191RAB157639.623
ENSKMAG00000017417-7642.262ENSKMAG00000009799rab2a7942.262
ENSKMAG00000017417-7639.286ENSKMAG00000003494si:dkey-16l2.169635.323
ENSKMAG00000017417-8941.837ENSKMAG00000006810rab1ba9641.837
ENSKMAG00000017417-7542.105ENSKMAG00000006812RAB7A8242.105
ENSKMAG00000017417-9040.404ENSKMAG00000011301-9240.404
ENSKMAG00000017417-8739.267ENSKMAG00000011278rab6bb9739.378
ENSKMAG00000017417-7931.844ENSKMAG00000001922Ha-ras9431.844
ENSKMAG00000017417-7644.048ENSKMAG00000004439rab308344.048
ENSKMAG00000017417-7940.223ENSKMAG00000020013-8640.223
ENSKMAG00000017417-7535.542ENSKMAG00000008625RAB39B7835.542
ENSKMAG00000017417-8939.806ENSKMAG00000020250rab4a9639.806
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000017417-9988.018ENSG00000108774RAB5C10093.600Homo_sapiens
ENSKMAG00000017417-9989.954ENSAPOG00000016864rab5c9989.954Acanthochromis_polyacanthus
ENSKMAG00000017417-9988.018ENSAMEG00000006003RAB5C9988.018Ailuropoda_melanoleuca
ENSKMAG00000017417-9990.411ENSACIG00000010896rab5c9990.411Amphilophus_citrinellus
ENSKMAG00000017417-9989.954ENSAOCG00000016614rab5c9989.954Amphiprion_ocellaris
ENSKMAG00000017417-9889.352ENSAPEG00000017868-9989.352Amphiprion_percula
ENSKMAG00000017417-9991.284ENSATEG00000001937rab5c9991.284Anabas_testudineus
ENSKMAG00000017417-9490.291ENSANAG00000025390RAB5C10090.291Aotus_nancymaae
ENSKMAG00000017417-9692.958ENSACLG00000008615-10092.342Astatotilapia_calliptera
ENSKMAG00000017417-9989.041ENSACLG00000002706rab5c9989.041Astatotilapia_calliptera
ENSKMAG00000017417-9588.462ENSAMXG00000037267-9988.462Astyanax_mexicanus
ENSKMAG00000017417-9991.364ENSAMXG00000043717rab5c9991.364Astyanax_mexicanus
ENSKMAG00000017417-9988.018ENSBTAG00000006982RAB5C9988.018Bos_taurus
ENSKMAG00000017417-9975.115WBGene00004268rab-59975.115Caenorhabditis_elegans
ENSKMAG00000017417-9988.479ENSCAFG00000015629RAB5C9988.479Canis_familiaris
ENSKMAG00000017417-9988.479ENSCAFG00020013537RAB5C9988.479Canis_lupus_dingo
ENSKMAG00000017417-9988.018ENSCHIG00000012960RAB5C9988.018Capra_hircus
ENSKMAG00000017417-9988.479ENSTSYG00000030531RAB5C9988.479Carlito_syrichta
ENSKMAG00000017417-9988.479ENSCCAG00000025940RAB5C9988.479Cebus_capucinus
ENSKMAG00000017417-9988.018ENSCATG00000040873RAB5C9988.018Cercocebus_atys
ENSKMAG00000017417-9988.018ENSCLAG00000016650RAB5C9988.018Chinchilla_lanigera
ENSKMAG00000017417-8192.737ENSCHOG00000009886RAB5C10092.737Choloepus_hoffmanni
ENSKMAG00000017417-10074.208ENSCING00000003340-10074.208Ciona_intestinalis
ENSKMAG00000017417-9576.256ENSCSAVG00000000613-9982.822Ciona_savignyi
ENSKMAG00000017417-9988.018ENSCGRG00001014226Rab5c9988.018Cricetulus_griseus_chok1gshd
ENSKMAG00000017417-9988.018ENSCGRG00000007534Rab5c9988.018Cricetulus_griseus_crigri
ENSKMAG00000017417-9990.411ENSCSEG00000017024rab5c9990.411Cynoglossus_semilaevis
ENSKMAG00000017417-9991.324ENSCVAG00000009550rab5c9991.324Cyprinodon_variegatus
ENSKMAG00000017417-9988.479ENSDNOG00000038853RAB5C9988.479Dasypus_novemcinctus
ENSKMAG00000017417-9988.479ENSDORG00000006819Rab5c9988.479Dipodomys_ordii
ENSKMAG00000017417-9672.770FBgn0014010Rab59472.770Drosophila_melanogaster
ENSKMAG00000017417-8782.292ENSEBUG00000014794rab5c9182.292Eptatretus_burgeri
ENSKMAG00000017417-9988.018ENSEASG00005009281RAB5C9988.018Equus_asinus_asinus
ENSKMAG00000017417-9988.479ENSECAG00000025054RAB5C9988.479Equus_caballus
ENSKMAG00000017417-9988.018ENSEEUG00000002790RAB5C9988.018Erinaceus_europaeus
ENSKMAG00000017417-9987.215ENSELUG00000010439-9987.215Esox_lucius
ENSKMAG00000017417-9989.862ENSELUG00000018516rab5c9989.862Esox_lucius
ENSKMAG00000017417-9988.018ENSFCAG00000002148RAB5C9988.018Felis_catus
ENSKMAG00000017417-9987.558ENSFDAG00000021541RAB5C9987.558Fukomys_damarensis
ENSKMAG00000017417-10094.545ENSFHEG00000015268-10094.545Fundulus_heteroclitus
ENSKMAG00000017417-9990.868ENSFHEG00000012117rab5c9990.868Fundulus_heteroclitus
ENSKMAG00000017417-7788.757ENSGMOG00000001876-9888.757Gadus_morhua
ENSKMAG00000017417-9990.868ENSGMOG00000015096rab5c9990.868Gadus_morhua
ENSKMAG00000017417-9595.215ENSGAFG00000003642-10092.377Gambusia_affinis
ENSKMAG00000017417-9990.411ENSGAFG00000000884rab5c9990.411Gambusia_affinis
ENSKMAG00000017417-9985.780ENSGACG00000008659rab5c9985.780Gasterosteus_aculeatus
ENSKMAG00000017417-9988.018ENSGGOG00000005472RAB5C9988.018Gorilla_gorilla
ENSKMAG00000017417-9692.958ENSHBUG00000006823-10092.342Haplochromis_burtoni
ENSKMAG00000017417-9989.041ENSHBUG00000002014rab5c9989.041Haplochromis_burtoni
ENSKMAG00000017417-9987.558ENSHGLG00000012067RAB5C9987.558Heterocephalus_glaber_female
ENSKMAG00000017417-9992.273ENSHCOG00000004662rab5c9892.273Hippocampus_comes
ENSKMAG00000017417-9585.167ENSHCOG00000020238-9984.018Hippocampus_comes
ENSKMAG00000017417-9588.571ENSIPUG00000020082rab5c9989.140Ictalurus_punctatus
ENSKMAG00000017417-9988.018ENSSTOG00000006620RAB5C9988.018Ictidomys_tridecemlineatus
ENSKMAG00000017417-9988.479ENSJJAG00000021181Rab5c9988.479Jaculus_jaculus
ENSKMAG00000017417-9991.324ENSLBEG00000004128rab5c9991.324Labrus_bergylta
ENSKMAG00000017417-10093.636ENSLBEG00000010408-10093.636Labrus_bergylta
ENSKMAG00000017417-9988.940ENSLOCG00000012566rab5c10088.940Lepisosteus_oculatus
ENSKMAG00000017417-9988.018ENSMFAG00000039627RAB5C9988.018Macaca_fascicularis
ENSKMAG00000017417-9988.018ENSMNEG00000000355RAB5C9988.018Macaca_nemestrina
ENSKMAG00000017417-10094.091ENSMAMG00000016207-10094.091Mastacembelus_armatus
ENSKMAG00000017417-9989.954ENSMAMG00000022322rab5c9989.954Mastacembelus_armatus
ENSKMAG00000017417-9989.041ENSMZEG00005022735rab5c9989.041Maylandia_zebra
ENSKMAG00000017417-9692.958ENSMZEG00005021090-10092.342Maylandia_zebra
ENSKMAG00000017417-9988.479ENSMAUG00000015005Rab5c9988.479Mesocricetus_auratus
ENSKMAG00000017417-9988.479ENSMICG00000041608RAB5C9988.479Microcebus_murinus
ENSKMAG00000017417-9988.940ENSMOCG00000018531-9988.940Microtus_ochrogaster
ENSKMAG00000017417-9989.908ENSMMOG00000020621rab5c9989.908Mola_mola
ENSKMAG00000017417-10092.273ENSMALG00000022348-10092.273Monopterus_albus
ENSKMAG00000017417-9783.568ENSMALG00000006052rab5c9982.511Monopterus_albus
ENSKMAG00000017417-9988.940MGP_CAROLIEiJ_G0017184Rab5c9988.940Mus_caroli
ENSKMAG00000017417-9988.940ENSMUSG00000019173Rab5c9988.940Mus_musculus
ENSKMAG00000017417-9988.940MGP_PahariEiJ_G0018314Rab5c9988.940Mus_pahari
ENSKMAG00000017417-9988.940MGP_SPRETEiJ_G0018027Rab5c9988.940Mus_spretus
ENSKMAG00000017417-9988.018ENSMPUG00000010554RAB5C9988.018Mustela_putorius_furo
ENSKMAG00000017417-9989.401ENSNGAG00000010286Rab5c9989.401Nannospalax_galili
ENSKMAG00000017417-9692.958ENSNBRG00000016922-10092.342Neolamprologus_brichardi
ENSKMAG00000017417-9989.954ENSNBRG00000018165rab5c9989.954Neolamprologus_brichardi
ENSKMAG00000017417-8186.034ENSOPRG00000008255RAB5C10086.034Ochotona_princeps
ENSKMAG00000017417-9988.479ENSODEG00000017920RAB5C9988.479Octodon_degus
ENSKMAG00000017417-9990.411ENSONIG00000001113rab5c9990.411Oreochromis_niloticus
ENSKMAG00000017417-9990.367ENSORLG00000003882rab5c9990.367Oryzias_latipes
ENSKMAG00000017417-9990.367ENSORLG00020008388rab5c9990.367Oryzias_latipes_hni
ENSKMAG00000017417-9990.367ENSORLG00015021900rab5c9990.367Oryzias_latipes_hsok
ENSKMAG00000017417-9990.367ENSOMEG00000023078rab5c9990.367Oryzias_melastigma
ENSKMAG00000017417-9988.479ENSOGAG00000009456RAB5C9988.479Otolemur_garnettii
ENSKMAG00000017417-9988.018ENSOARG00000018768RAB5C9988.018Ovis_aries
ENSKMAG00000017417-9988.018ENSPPAG00000037206RAB5C9988.018Pan_paniscus
ENSKMAG00000017417-9988.018ENSPPRG00000005745RAB5C9988.018Panthera_pardus
ENSKMAG00000017417-9988.018ENSPTIG00000008177RAB5C9988.018Panthera_tigris_altaica
ENSKMAG00000017417-9988.018ENSPTRG00000009194RAB5C9988.018Pan_troglodytes
ENSKMAG00000017417-9985.253ENSPKIG00000020112-9985.253Paramormyrops_kingsleyae
ENSKMAG00000017417-9986.175ENSPKIG00000001237-9986.175Paramormyrops_kingsleyae
ENSKMAG00000017417-9791.080ENSPMGG00000010792rab5c9891.080Periophthalmus_magnuspinnatus
ENSKMAG00000017417-9988.940ENSPEMG00000017971Rab5c9988.940Peromyscus_maniculatus_bairdii
ENSKMAG00000017417-9975.229ENSPMAG00000001399rab5c10075.229Petromyzon_marinus
ENSKMAG00000017417-9974.775ENSPMAG00000000008rab5c9974.775Petromyzon_marinus
ENSKMAG00000017417-9973.394ENSPMAG00000007867rab5c9973.394Petromyzon_marinus
ENSKMAG00000017417-9987.558ENSPCIG00000020225-9987.558Phascolarctos_cinereus
ENSKMAG00000017417-9990.411ENSPLAG00000004790rab5c9990.411Poecilia_latipinna
ENSKMAG00000017417-9994.521ENSPLAG00000016333-10094.521Poecilia_latipinna
ENSKMAG00000017417-9795.775ENSPMEG00000012614-9994.118Poecilia_mexicana
ENSKMAG00000017417-9990.411ENSPMEG00000011336rab5c9990.411Poecilia_mexicana
ENSKMAG00000017417-8694.180ENSPREG00000022167-8996.175Poecilia_reticulata
ENSKMAG00000017417-9990.411ENSPREG00000010146rab5c9990.411Poecilia_reticulata
ENSKMAG00000017417-9988.018ENSPPYG00000008398RAB5C9988.018Pongo_abelii
ENSKMAG00000017417-9987.558ENSPCAG00000016412RAB5C9987.558Procavia_capensis
ENSKMAG00000017417-9988.940ENSPCOG00000026327RAB5C9988.940Propithecus_coquereli
ENSKMAG00000017417-9988.479ENSPVAG00000003867RAB5C9988.479Pteropus_vampyrus
ENSKMAG00000017417-9692.958ENSPNYG00000015851-10092.342Pundamilia_nyererei
ENSKMAG00000017417-9989.041ENSPNYG00000010615rab5c9989.041Pundamilia_nyererei
ENSKMAG00000017417-9991.818ENSPNAG00000028138rab5c9991.818Pygocentrus_nattereri
ENSKMAG00000017417-9587.560ENSPNAG00000002218-9887.560Pygocentrus_nattereri
ENSKMAG00000017417-9988.479ENSRNOG00000018568Rab5c9988.479Rattus_norvegicus
ENSKMAG00000017417-9988.018ENSRBIG00000031376RAB5C9988.018Rhinopithecus_bieti
ENSKMAG00000017417-9988.018ENSRROG00000032895RAB5C9988.018Rhinopithecus_roxellana
ENSKMAG00000017417-9988.479ENSSBOG00000032552-9988.479Saimiri_boliviensis_boliviensis
ENSKMAG00000017417-9988.018ENSSHAG00000005267-9988.018Sarcophilus_harrisii
ENSKMAG00000017417-9985.253ENSSFOG00015009988-9885.253Scleropages_formosus
ENSKMAG00000017417-9590.000ENSSMAG00000007323rab5c9989.041Scophthalmus_maximus
ENSKMAG00000017417-9989.954ENSSDUG00000023008rab5c9989.954Seriola_dumerili
ENSKMAG00000017417-9989.041ENSSLDG00000017771rab5c9989.041Seriola_lalandi_dorsalis
ENSKMAG00000017417-9988.018ENSSPUG00000012950-9988.018Sphenodon_punctatus
ENSKMAG00000017417-9990.868ENSSPAG00000006436rab5c9990.868Stegastes_partitus
ENSKMAG00000017417-9988.018ENSSSCG00000032467RAB5C9988.018Sus_scrofa
ENSKMAG00000017417-9990.411ENSTRUG00000015590rab5c9990.411Takifugu_rubripes
ENSKMAG00000017417-9988.940ENSTNIG00000011711rab5c9888.940Tetraodon_nigroviridis
ENSKMAG00000017417-9988.018ENSTBEG00000007092RAB5C9988.018Tupaia_belangeri
ENSKMAG00000017417-9987.558ENSTTRG00000006673RAB5C9987.558Tursiops_truncatus
ENSKMAG00000017417-9988.018ENSUAMG00000024343RAB5C9988.018Ursus_americanus
ENSKMAG00000017417-9988.018ENSUMAG00000023270RAB5C9988.018Ursus_maritimus
ENSKMAG00000017417-9596.172ENSXCOG00000006300-10093.274Xiphophorus_couchianus
ENSKMAG00000017417-9990.868ENSXCOG00000016788rab5c9990.868Xiphophorus_couchianus
ENSKMAG00000017417-9990.411ENSXMAG00000003266rab5c9990.411Xiphophorus_maculatus
ENSKMAG00000017417-9994.064ENSXMAG00000022179-10094.064Xiphophorus_maculatus

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