EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000017524 (Gene tree)
Gene ID: 108247237
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5169 bases
Position: chrLWHD01000259.1:15066-20234
Accession: 108247237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023642	FDF	PF09532.10	9.9e-08	1	1
ENSKMAP00000023642	SM-ATX	PF14438.6	2.2e-08	1	1
ENSKMAP00000023642	LSM14	PF12701.7	7.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000023942	-	4286	XM_017435203	ENSKMAP00000023642	366 (aa)	XP_017290692	UPI0007F871BE

Gene Model

Click here to download ENSKMAG00000017524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000017524	lsm14b	91	39.409	ENSKMAG00000006797	lsm14aa	85	40.441
ENSKMAG00000017524	lsm14b	91	40.051	ENSKMAG00000001398	lsm14ab	85	41.944
ENSKMAG00000017524	lsm14b	52	38.863	ENSKMAG00000012834	-	86	42.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017524	lsm14b	93	52.316	ENSG00000149657	LSM14B	100	52.326	Homo_sapiens
ENSKMAG00000017524	lsm14b	100	79.730	ENSAPOG00000001780	lsm14b	100	79.730	Acanthochromis_polyacanthus
ENSKMAG00000017524	lsm14b	92	46.929	ENSAMEG00000013430	LSM14B	91	46.867	Ailuropoda_melanoleuca
ENSKMAG00000017524	lsm14b	99	68.767	ENSACIG00000012266	lsm14b	99	68.767	Amphilophus_citrinellus
ENSKMAG00000017524	lsm14b	100	80.811	ENSAOCG00000012380	lsm14b	100	80.811	Amphiprion_ocellaris
ENSKMAG00000017524	lsm14b	94	47.581	ENSAOCG00000006667	LSM14B	89	47.339	Amphiprion_ocellaris
ENSKMAG00000017524	lsm14b	100	72.043	ENSAPEG00000023633	lsm14b	100	72.312	Amphiprion_percula
ENSKMAG00000017524	lsm14b	100	71.733	ENSATEG00000016603	lsm14b	100	72.267	Anabas_testudineus
ENSKMAG00000017524	lsm14b	64	40.217	ENSATEG00000015895	LSM14B	88	39.649	Anabas_testudineus
ENSKMAG00000017524	lsm14b	83	44.000	ENSAPLG00000013203	LSM14B	90	44.353	Anas_platyrhynchos
ENSKMAG00000017524	lsm14b	92	51.220	ENSACAG00000016195	LSM14B	89	51.374	Anolis_carolinensis
ENSKMAG00000017524	lsm14b	93	52.575	ENSANAG00000037915	LSM14B	90	52.198	Aotus_nancymaae
ENSKMAG00000017524	lsm14b	100	72.162	ENSACLG00000019663	lsm14b	100	72.162	Astatotilapia_calliptera
ENSKMAG00000017524	lsm14b	90	53.261	ENSAMXG00000002865	lsm14b	90	59.104	Astyanax_mexicanus
ENSKMAG00000017524	lsm14b	93	47.666	ENSBTAG00000021558	LSM14B	91	46.269	Bos_taurus
ENSKMAG00000017524	lsm14b	93	52.044	ENSCJAG00000014434	LSM14B	90	51.657	Callithrix_jacchus
ENSKMAG00000017524	lsm14b	82	44.324	ENSCAFG00000012518	LSM14B	89	44.199	Canis_familiaris
ENSKMAG00000017524	lsm14b	93	52.846	ENSCAFG00020022150	LSM14B	90	52.617	Canis_lupus_dingo
ENSKMAG00000017524	lsm14b	93	52.973	ENSCHIG00000010284	-	90	52.747	Capra_hircus
ENSKMAG00000017524	lsm14b	93	40.533	ENSCHIG00000022681	-	90	41.226	Capra_hircus
ENSKMAG00000017524	lsm14b	81	49.383	ENSTSYG00000031914	LSM14B	79	48.903	Carlito_syrichta
ENSKMAG00000017524	lsm14b	81	50.765	ENSCAPG00000013059	LSM14B	89	50.311	Cavia_aperea
ENSKMAG00000017524	lsm14b	81	50.920	ENSCPOG00000038080	LSM14B	89	49.530	Cavia_porcellus
ENSKMAG00000017524	lsm14b	93	52.877	ENSCCAG00000021267	LSM14B	90	52.500	Cebus_capucinus
ENSKMAG00000017524	lsm14b	93	37.569	ENSCCAG00000024900	-	76	36.388	Cebus_capucinus
ENSKMAG00000017524	lsm14b	93	52.316	ENSCATG00000036006	LSM14B	90	51.934	Cercocebus_atys
ENSKMAG00000017524	lsm14b	81	50.613	ENSCLAG00000003186	LSM14B	89	50.156	Chinchilla_lanigera
ENSKMAG00000017524	lsm14b	93	47.059	ENSCSAG00000015729	LSM14B	91	46.883	Chlorocebus_sabaeus
ENSKMAG00000017524	lsm14b	62	36.614	ENSCHOG00000006997	-	86	36.214	Choloepus_hoffmanni
ENSKMAG00000017524	lsm14b	92	47.783	ENSCPBG00000027065	LSM14B	91	47.500	Chrysemys_picta_bellii
ENSKMAG00000017524	lsm14b	81	49.691	ENSCANG00000036986	LSM14B	89	49.216	Colobus_angolensis_palliatus
ENSKMAG00000017524	lsm14b	93	52.316	ENSCGRG00001018399	Lsm14b	90	52.342	Cricetulus_griseus_chok1gshd
ENSKMAG00000017524	lsm14b	53	39.906	ENSCGRG00000002484	-	80	38.942	Cricetulus_griseus_crigri
ENSKMAG00000017524	lsm14b	61	36.054	ENSCGRG00000006111	-	90	37.234	Cricetulus_griseus_crigri
ENSKMAG00000017524	lsm14b	93	47.312	ENSCSEG00000020669	LSM14B	90	47.645	Cynoglossus_semilaevis
ENSKMAG00000017524	lsm14b	92	73.099	ENSCSEG00000004722	lsm14b	91	73.099	Cynoglossus_semilaevis
ENSKMAG00000017524	lsm14b	64	38.153	ENSCVAG00000012433	-	89	37.238	Cyprinodon_variegatus
ENSKMAG00000017524	lsm14b	92	56.667	ENSDARG00000025386	lsm14b	90	56.461	Danio_rerio
ENSKMAG00000017524	lsm14b	61	37.413	ENSDNOG00000025246	LSM14B	88	36.749	Dasypus_novemcinctus
ENSKMAG00000017524	lsm14b	83	49.544	ENSDORG00000016683	Lsm14b	79	49.074	Dipodomys_ordii
ENSKMAG00000017524	lsm14b	57	39.130	ENSETEG00000011188	-	99	40.329	Echinops_telfairi
ENSKMAG00000017524	lsm14b	93	44.110	ENSETEG00000001869	-	89	43.590	Echinops_telfairi
ENSKMAG00000017524	lsm14b	61	43.802	ENSEASG00005023218	LSM14B	85	42.857	Equus_asinus_asinus
ENSKMAG00000017524	lsm14b	93	53.261	ENSECAG00000010659	LSM14B	90	53.039	Equus_caballus
ENSKMAG00000017524	lsm14b	98	59.173	ENSELUG00000005780	lsm14b	90	59.322	Esox_lucius
ENSKMAG00000017524	lsm14b	91	52.907	ENSELUG00000016299	LSM14B	90	52.907	Esox_lucius
ENSKMAG00000017524	lsm14b	93	53.117	ENSFCAG00000003248	LSM14B	90	52.210	Felis_catus
ENSKMAG00000017524	lsm14b	82	45.924	ENSFALG00000010618	LSM14B	90	45.580	Ficedula_albicollis
ENSKMAG00000017524	lsm14b	81	49.691	ENSFDAG00000002214	LSM14B	89	49.216	Fukomys_damarensis
ENSKMAG00000017524	lsm14b	71	50.916	ENSFHEG00000003362	LSM14B	70	50.355	Fundulus_heteroclitus
ENSKMAG00000017524	lsm14b	100	72.237	ENSFHEG00000006237	lsm14b	100	71.429	Fundulus_heteroclitus
ENSKMAG00000017524	lsm14b	100	63.395	ENSGMOG00000017115	lsm14b	89	65.015	Gadus_morhua
ENSKMAG00000017524	lsm14b	92	53.825	ENSGALG00000005125	LSM14B	90	53.611	Gallus_gallus
ENSKMAG00000017524	lsm14b	68	42.529	ENSGAFG00000013723	LSM14B	85	42.544	Gambusia_affinis
ENSKMAG00000017524	lsm14b	92	72.271	ENSGAFG00000020318	lsm14b	91	72.271	Gambusia_affinis
ENSKMAG00000017524	lsm14b	99	71.809	ENSGACG00000009973	lsm14b	99	71.809	Gasterosteus_aculeatus
ENSKMAG00000017524	lsm14b	55	39.130	ENSGAGG00000004106	LSM14B	77	40.187	Gopherus_agassizii
ENSKMAG00000017524	lsm14b	83	48.485	ENSGGOG00000005630	LSM14B	85	48.000	Gorilla_gorilla
ENSKMAG00000017524	lsm14b	93	52.044	ENSHGLG00000015055	LSM14B	90	51.657	Heterocephalus_glaber_female
ENSKMAG00000017524	lsm14b	81	47.975	ENSHGLG00100015273	LSM14B	89	47.468	Heterocephalus_glaber_male
ENSKMAG00000017524	lsm14b	68	50.000	ENSHCOG00000004867	lsm14b	100	50.388	Hippocampus_comes
ENSKMAG00000017524	lsm14b	98	47.342	ENSHCOG00000018747	LSM14B	90	47.500	Hippocampus_comes
ENSKMAG00000017524	lsm14b	90	60.000	ENSIPUG00000014946	lsm14b	85	60.571	Ictalurus_punctatus
ENSKMAG00000017524	lsm14b	81	48.457	ENSSTOG00000020482	LSM14B	89	49.363	Ictidomys_tridecemlineatus
ENSKMAG00000017524	lsm14b	92	53.994	ENSJJAG00000012728	Lsm14b	89	53.501	Jaculus_jaculus
ENSKMAG00000017524	lsm14b	64	40.800	ENSLBEG00000007951	LSM14B	85	36.325	Labrus_bergylta
ENSKMAG00000017524	lsm14b	92	45.729	ENSLACG00000003849	LSM14B	91	48.139	Latimeria_chalumnae
ENSKMAG00000017524	lsm14b	90	56.941	ENSLOCG00000003746	lsm14b	90	58.074	Lepisosteus_oculatus
ENSKMAG00000017524	lsm14b	82	48.632	ENSLAFG00000007492	LSM14B	89	48.457	Loxodonta_africana
ENSKMAG00000017524	lsm14b	93	52.316	ENSMFAG00000041479	LSM14B	90	51.934	Macaca_fascicularis
ENSKMAG00000017524	lsm14b	93	52.316	ENSMMUG00000014084	LSM14B	90	51.934	Macaca_mulatta
ENSKMAG00000017524	lsm14b	93	52.316	ENSMNEG00000045573	LSM14B	90	51.934	Macaca_nemestrina
ENSKMAG00000017524	lsm14b	81	49.074	ENSMLEG00000040895	LSM14B	89	48.589	Mandrillus_leucophaeus
ENSKMAG00000017524	lsm14b	93	50.696	ENSMAMG00000024124	LSM14B	89	49.713	Mastacembelus_armatus
ENSKMAG00000017524	lsm14b	92	74.487	ENSMAMG00000020539	lsm14b	91	74.487	Mastacembelus_armatus
ENSKMAG00000017524	lsm14b	100	72.432	ENSMZEG00005000987	lsm14b	100	72.432	Maylandia_zebra
ENSKMAG00000017524	lsm14b	92	46.240	ENSMZEG00005026001	LSM14B	93	48.169	Maylandia_zebra
ENSKMAG00000017524	lsm14b	83	49.394	ENSMGAG00000005300	LSM14B	89	49.074	Meleagris_gallopavo
ENSKMAG00000017524	lsm14b	93	51.771	ENSMAUG00000020700	Lsm14b	90	51.791	Mesocricetus_auratus
ENSKMAG00000017524	lsm14b	93	53.571	ENSMICG00000014675	LSM14B	90	53.203	Microcebus_murinus
ENSKMAG00000017524	lsm14b	62	38.182	ENSMOCG00000005119	-	91	35.849	Microtus_ochrogaster
ENSKMAG00000017524	lsm14b	93	52.846	ENSMOCG00000020600	Lsm14b	90	52.486	Microtus_ochrogaster
ENSKMAG00000017524	lsm14b	91	50.144	ENSMMOG00000017321	LSM14B	89	49.563	Mola_mola
ENSKMAG00000017524	lsm14b	90	67.867	ENSMMOG00000020042	lsm14b	93	67.867	Mola_mola
ENSKMAG00000017524	lsm14b	61	39.024	ENSMODG00000016690	LSM14B	88	38.298	Monodelphis_domestica
ENSKMAG00000017524	lsm14b	96	74.504	ENSMALG00000004783	lsm14b	89	74.260	Monopterus_albus
ENSKMAG00000017524	lsm14b	92	48.034	ENSMALG00000022251	LSM14B	89	48.148	Monopterus_albus
ENSKMAG00000017524	lsm14b	93	53.533	MGP_CAROLIEiJ_G0024770	Lsm14b	90	53.168	Mus_caroli
ENSKMAG00000017524	lsm14b	93	53.533	ENSMUSG00000039108	Lsm14b	90	53.168	Mus_musculus
ENSKMAG00000017524	lsm14b	93	52.846	MGP_PahariEiJ_G0026214	Lsm14b	90	52.473	Mus_pahari
ENSKMAG00000017524	lsm14b	93	53.533	MGP_SPRETEiJ_G0025693	Lsm14b	90	53.168	Mus_spretus
ENSKMAG00000017524	lsm14b	87	44.125	ENSMPUG00000007584	LSM14B	91	43.883	Mustela_putorius_furo
ENSKMAG00000017524	lsm14b	92	52.500	ENSMLUG00000000304	LSM14B	90	52.500	Myotis_lucifugus
ENSKMAG00000017524	lsm14b	52	42.723	ENSNGAG00000016550	Lsm14b	84	41.063	Nannospalax_galili
ENSKMAG00000017524	lsm14b	81	49.074	ENSNLEG00000015757	LSM14B	89	48.589	Nomascus_leucogenys
ENSKMAG00000017524	lsm14b	66	72.222	ENSMEUG00000008267	-	90	47.500	Notamacropus_eugenii
ENSKMAG00000017524	lsm14b	93	52.589	ENSODEG00000004099	LSM14B	90	52.210	Octodon_degus
ENSKMAG00000017524	lsm14b	100	75.135	ENSONIG00000020318	lsm14b	100	72.432	Oreochromis_niloticus
ENSKMAG00000017524	lsm14b	75	53.737	ENSOANG00000003370	LSM14B	96	53.929	Ornithorhynchus_anatinus
ENSKMAG00000017524	lsm14b	82	48.476	ENSOCUG00000006279	LSM14B	89	48.447	Oryctolagus_cuniculus
ENSKMAG00000017524	lsm14b	92	43.989	ENSORLG00000028353	LSM14B	90	44.568	Oryzias_latipes
ENSKMAG00000017524	lsm14b	100	78.320	ENSORLG00000013525	lsm14b	100	80.217	Oryzias_latipes
ENSKMAG00000017524	lsm14b	63	35.798	ENSORLG00020018191	-	85	35.484	Oryzias_latipes_hni
ENSKMAG00000017524	lsm14b	100	78.320	ENSORLG00020020553	lsm14b	100	80.217	Oryzias_latipes_hni
ENSKMAG00000017524	lsm14b	100	78.320	ENSORLG00015016862	lsm14b	100	80.217	Oryzias_latipes_hsok
ENSKMAG00000017524	lsm14b	92	43.989	ENSORLG00015013157	LSM14B	90	44.290	Oryzias_latipes_hsok
ENSKMAG00000017524	lsm14b	100	77.778	ENSOMEG00000023917	lsm14b	100	76.965	Oryzias_melastigma
ENSKMAG00000017524	lsm14b	64	33.197	ENSOMEG00000000171	-	83	34.375	Oryzias_melastigma
ENSKMAG00000017524	lsm14b	93	47.304	ENSOGAG00000003915	LSM14B	91	47.132	Otolemur_garnettii
ENSKMAG00000017524	lsm14b	81	44.932	ENSOARG00000014706	LSM14B	88	44.568	Ovis_aries
ENSKMAG00000017524	lsm14b	83	48.485	ENSPPAG00000035799	LSM14B	85	48.000	Pan_paniscus
ENSKMAG00000017524	lsm14b	93	52.717	ENSPPRG00000009197	LSM14B	90	52.486	Panthera_pardus
ENSKMAG00000017524	lsm14b	61	42.975	ENSPTIG00000021518	LSM14B	88	42.194	Panthera_tigris_altaica
ENSKMAG00000017524	lsm14b	93	52.316	ENSPTRG00000013696	LSM14B	90	51.934	Pan_troglodytes
ENSKMAG00000017524	lsm14b	93	52.316	ENSPANG00000011747	LSM14B	90	51.934	Papio_anubis
ENSKMAG00000017524	lsm14b	92	58.239	ENSPKIG00000003275	lsm14b	85	81.522	Paramormyrops_kingsleyae
ENSKMAG00000017524	lsm14b	82	50.613	ENSPSIG00000014762	LSM14B	89	50.313	Pelodiscus_sinensis
ENSKMAG00000017524	lsm14b	92	52.486	ENSPEMG00000017688	Lsm14b	90	52.514	Peromyscus_maniculatus_bairdii
ENSKMAG00000017524	lsm14b	93	53.678	ENSPCIG00000013405	LSM14B	90	53.463	Phascolarctos_cinereus
ENSKMAG00000017524	lsm14b	100	75.946	ENSPFOG00000005631	lsm14b	100	73.784	Poecilia_formosa
ENSKMAG00000017524	lsm14b	90	49.415	ENSPLAG00000005793	LSM14B	89	49.563	Poecilia_latipinna
ENSKMAG00000017524	lsm14b	100	75.405	ENSPLAG00000002449	lsm14b	100	73.243	Poecilia_latipinna
ENSKMAG00000017524	lsm14b	100	74.324	ENSPMEG00000000745	lsm14b	100	73.784	Poecilia_mexicana
ENSKMAG00000017524	lsm14b	89	48.824	ENSPMEG00000022953	LSM14B	89	49.709	Poecilia_mexicana
ENSKMAG00000017524	lsm14b	62	38.281	ENSPREG00000007828	LSM14B	85	38.153	Poecilia_reticulata
ENSKMAG00000017524	lsm14b	93	49.333	ENSPPYG00000011194	LSM14B	90	49.189	Pongo_abelii
ENSKMAG00000017524	lsm14b	93	52.589	ENSPCOG00000013625	LSM14B	90	52.210	Propithecus_coquereli
ENSKMAG00000017524	lsm14b	70	40.000	ENSPVAG00000017918	LSM14B	88	42.456	Pteropus_vampyrus
ENSKMAG00000017524	lsm14b	90	59.026	ENSPNAG00000012777	lsm14b	90	59.599	Pygocentrus_nattereri
ENSKMAG00000017524	lsm14b	93	48.768	ENSRNOG00000054557	Lsm14b	91	48.130	Rattus_norvegicus
ENSKMAG00000017524	lsm14b	81	49.846	ENSRBIG00000033461	LSM14B	88	49.375	Rhinopithecus_bieti
ENSKMAG00000017524	lsm14b	83	50.453	ENSRROG00000042949	LSM14B	81	50.000	Rhinopithecus_roxellana
ENSKMAG00000017524	lsm14b	81	49.221	ENSSBOG00000032820	LSM14B	89	48.734	Saimiri_boliviensis_boliviensis
ENSKMAG00000017524	lsm14b	83	50.760	ENSSHAG00000015528	LSM14B	87	50.464	Sarcophilus_harrisii
ENSKMAG00000017524	lsm14b	91	58.140	ENSSFOG00015004627	lsm14b	91	58.857	Scleropages_formosus
ENSKMAG00000017524	lsm14b	100	73.404	ENSSMAG00000012725	lsm14b	100	73.670	Scophthalmus_maximus
ENSKMAG00000017524	lsm14b	93	50.270	ENSSMAG00000000135	LSM14B	89	48.603	Scophthalmus_maximus
ENSKMAG00000017524	lsm14b	92	50.712	ENSSDUG00000022770	LSM14B	89	49.855	Seriola_dumerili
ENSKMAG00000017524	lsm14b	100	74.866	ENSSDUG00000020977	lsm14b	100	75.134	Seriola_dumerili
ENSKMAG00000017524	lsm14b	62	40.400	ENSSLDG00000011354	-	88	42.276	Seriola_lalandi_dorsalis
ENSKMAG00000017524	lsm14b	52	38.356	ENSSARG00000007749	-	97	40.183	Sorex_araneus
ENSKMAG00000017524	lsm14b	92	48.139	ENSSPUG00000014360	LSM14B	95	50.142	Sphenodon_punctatus
ENSKMAG00000017524	lsm14b	100	74.324	ENSSPAG00000020915	lsm14b	100	74.595	Stegastes_partitus
ENSKMAG00000017524	lsm14b	64	36.466	ENSSPAG00000018854	-	86	33.735	Stegastes_partitus
ENSKMAG00000017524	lsm14b	93	53.005	ENSSSCG00000026052	LSM14B	75	52.793	Sus_scrofa
ENSKMAG00000017524	lsm14b	82	50.915	ENSTGUG00000007884	LSM14B	89	50.621	Taeniopygia_guttata
ENSKMAG00000017524	lsm14b	92	51.966	ENSTRUG00000001529	LSM14B	90	51.143	Takifugu_rubripes
ENSKMAG00000017524	lsm14b	100	72.043	ENSTRUG00000011354	lsm14b	100	70.430	Takifugu_rubripes
ENSKMAG00000017524	lsm14b	99	68.286	ENSTNIG00000002445	lsm14b	99	65.729	Tetraodon_nigroviridis
ENSKMAG00000017524	lsm14b	75	76.190	ENSTTRG00000011043	LSM14B	90	37.330	Tursiops_truncatus
ENSKMAG00000017524	lsm14b	90	47.222	ENSUAMG00000025298	LSM14B	89	46.893	Ursus_americanus
ENSKMAG00000017524	lsm14b	90	47.222	ENSUMAG00000000480	LSM14B	89	46.893	Ursus_maritimus
ENSKMAG00000017524	lsm14b	82	49.544	ENSVVUG00000015920	LSM14B	88	49.226	Vulpes_vulpes
ENSKMAG00000017524	lsm14b	86	52.616	ENSXETG00000001997	lsm14b	99	54.519	Xenopus_tropicalis
ENSKMAG00000017524	lsm14b	92	77.745	ENSXMAG00000010013	lsm14b	91	77.745	Xiphophorus_maculatus