EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017546 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 13080 bases
Position: chrLWHD01000024.1:2157613-2170692
Accession: 108234092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000023705	SpoU_methylase	PF00588.19	2.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024007	-	4329	XM_017413005	ENSKMAP00000023705	1442 (aa)	XP_017268494	-

Gene Model

Click here to download ENSKMAG00000017546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017546	si:dkey-85a20.4	76	47.995	ENSG00000059588	TARBP1	79	47.594	Homo_sapiens
ENSKMAG00000017546	si:dkey-85a20.4	98	71.620	ENSAPOG00000016419	si:dkey-85a20.4	92	71.620	Acanthochromis_polyacanthus
ENSKMAG00000017546	si:dkey-85a20.4	74	45.669	ENSAMEG00000003359	TARBP1	86	45.276	Ailuropoda_melanoleuca
ENSKMAG00000017546	si:dkey-85a20.4	99	63.685	ENSATEG00000020266	si:dkey-85a20.4	88	68.539	Anabas_testudineus
ENSKMAG00000017546	si:dkey-85a20.4	82	45.902	ENSAPLG00000007666	TARBP1	76	48.396	Anas_platyrhynchos
ENSKMAG00000017546	si:dkey-85a20.4	86	45.960	ENSACAG00000001142	TARBP1	80	45.960	Anolis_carolinensis
ENSKMAG00000017546	si:dkey-85a20.4	74	47.995	ENSANAG00000022031	TARBP1	67	47.594	Aotus_nancymaae
ENSKMAG00000017546	si:dkey-85a20.4	85	41.791	ENSBTAG00000004517	TARBP1	99	38.778	Bos_taurus
ENSKMAG00000017546	si:dkey-85a20.4	89	47.460	ENSCJAG00000018155	TARBP1	79	47.193	Callithrix_jacchus
ENSKMAG00000017546	si:dkey-85a20.4	71	46.862	ENSCAFG00000011533	TARBP1	76	46.988	Canis_familiaris
ENSKMAG00000017546	si:dkey-85a20.4	76	45.248	ENSCAFG00020027141	TARBP1	79	46.854	Canis_lupus_dingo
ENSKMAG00000017546	si:dkey-85a20.4	75	46.846	ENSCHIG00000011437	TARBP1	80	46.377	Capra_hircus
ENSKMAG00000017546	si:dkey-85a20.4	67	47.390	ENSTSYG00000010382	TARBP1	76	46.579	Carlito_syrichta
ENSKMAG00000017546	si:dkey-85a20.4	67	44.966	ENSCAPG00000010831	TARBP1	75	50.802	Cavia_aperea
ENSKMAG00000017546	si:dkey-85a20.4	69	53.099	ENSCPOG00000013995	TARBP1	75	53.000	Cavia_porcellus
ENSKMAG00000017546	si:dkey-85a20.4	71	48.821	ENSCCAG00000037278	TARBP1	71	47.727	Cebus_capucinus
ENSKMAG00000017546	si:dkey-85a20.4	71	48.594	ENSCATG00000011754	TARBP1	79	48.193	Cercocebus_atys
ENSKMAG00000017546	si:dkey-85a20.4	65	46.533	ENSCLAG00000003655	TARBP1	73	46.250	Chinchilla_lanigera
ENSKMAG00000017546	si:dkey-85a20.4	63	48.396	ENSCSAG00000010100	TARBP1	74	47.995	Chlorocebus_sabaeus
ENSKMAG00000017546	si:dkey-85a20.4	92	38.797	ENSCPBG00000005587	TARBP1	87	45.191	Chrysemys_picta_bellii
ENSKMAG00000017546	si:dkey-85a20.4	72	48.461	ENSCANG00000034343	TARBP1	75	48.059	Colobus_angolensis_palliatus
ENSKMAG00000017546	si:dkey-85a20.4	90	47.523	ENSCGRG00001016690	Tarbp1	79	47.523	Cricetulus_griseus_chok1gshd
ENSKMAG00000017546	si:dkey-85a20.4	75	47.523	ENSCGRG00000016893	Tarbp1	73	47.523	Cricetulus_griseus_crigri
ENSKMAG00000017546	si:dkey-85a20.4	99	56.043	ENSCSEG00000005255	si:dkey-85a20.4	90	67.166	Cynoglossus_semilaevis
ENSKMAG00000017546	si:dkey-85a20.4	84	60.660	ENSDARG00000079055	si:dkey-85a20.4	99	68.448	Danio_rerio
ENSKMAG00000017546	si:dkey-85a20.4	76	48.267	ENSDNOG00000008637	TARBP1	80	47.582	Dasypus_novemcinctus
ENSKMAG00000017546	si:dkey-85a20.4	64	48.522	ENSDORG00000007984	Tarbp1	75	48.656	Dipodomys_ordii
ENSKMAG00000017546	si:dkey-85a20.4	91	46.974	ENSEASG00005000252	TARBP1	89	46.588	Equus_asinus_asinus
ENSKMAG00000017546	si:dkey-85a20.4	74	47.390	ENSECAG00000023673	TARBP1	89	46.579	Equus_caballus
ENSKMAG00000017546	si:dkey-85a20.4	98	55.876	ENSELUG00000012193	si:dkey-85a20.4	83	63.699	Esox_lucius
ENSKMAG00000017546	si:dkey-85a20.4	75	46.806	ENSFCAG00000014183	TARBP1	71	46.291	Felis_catus
ENSKMAG00000017546	si:dkey-85a20.4	79	48.193	ENSFALG00000013565	TARBP1	95	48.193	Ficedula_albicollis
ENSKMAG00000017546	si:dkey-85a20.4	68	45.278	ENSFDAG00000001308	TARBP1	77	48.148	Fukomys_damarensis
ENSKMAG00000017546	si:dkey-85a20.4	86	81.894	ENSFHEG00000007565	si:dkey-85a20.4	98	81.894	Fundulus_heteroclitus
ENSKMAG00000017546	si:dkey-85a20.4	75	64.557	ENSGMOG00000004549	si:dkey-85a20.4	81	65.625	Gadus_morhua
ENSKMAG00000017546	si:dkey-85a20.4	79	46.806	ENSGALG00000011000	TARBP1	89	46.806	Gallus_gallus
ENSKMAG00000017546	si:dkey-85a20.4	98	70.767	ENSGAFG00000007387	si:dkey-85a20.4	89	70.524	Gambusia_affinis
ENSKMAG00000017546	si:dkey-85a20.4	81	67.906	ENSGACG00000005865	si:dkey-85a20.4	85	67.960	Gasterosteus_aculeatus
ENSKMAG00000017546	si:dkey-85a20.4	82	47.401	ENSGAGG00000012102	TARBP1	88	44.281	Gopherus_agassizii
ENSKMAG00000017546	si:dkey-85a20.4	73	45.918	ENSGGOG00000022879	TARBP1	74	45.918	Gorilla_gorilla
ENSKMAG00000017546	si:dkey-85a20.4	97	70.660	ENSHBUG00000008877	si:dkey-85a20.4	89	70.660	Haplochromis_burtoni
ENSKMAG00000017546	si:dkey-85a20.4	76	47.122	ENSHGLG00000011592	TARBP1	80	46.245	Heterocephalus_glaber_female
ENSKMAG00000017546	si:dkey-85a20.4	75	47.122	ENSHGLG00100015169	TARBP1	73	46.720	Heterocephalus_glaber_male
ENSKMAG00000017546	si:dkey-85a20.4	90	59.724	ENSIPUG00000005249	si:dkey-85a20.4	79	59.724	Ictalurus_punctatus
ENSKMAG00000017546	si:dkey-85a20.4	69	46.925	ENSSTOG00000032291	TARBP1	76	46.457	Ictidomys_tridecemlineatus
ENSKMAG00000017546	si:dkey-85a20.4	74	45.626	ENSJJAG00000017840	Tarbp1	81	45.626	Jaculus_jaculus
ENSKMAG00000017546	si:dkey-85a20.4	96	62.726	ENSLBEG00000012132	si:dkey-85a20.4	99	62.448	Labrus_bergylta
ENSKMAG00000017546	si:dkey-85a20.4	85	48.758	ENSLACG00000004337	TARBP1	80	48.758	Latimeria_chalumnae
ENSKMAG00000017546	si:dkey-85a20.4	92	59.456	ENSLOCG00000016214	si:dkey-85a20.4	85	59.209	Lepisosteus_oculatus
ENSKMAG00000017546	si:dkey-85a20.4	69	48.465	ENSLAFG00000011394	TARBP1	74	48.064	Loxodonta_africana
ENSKMAG00000017546	si:dkey-85a20.4	75	48.262	ENSMFAG00000041068	TARBP1	79	47.861	Macaca_fascicularis
ENSKMAG00000017546	si:dkey-85a20.4	75	48.262	ENSMMUG00000021703	TARBP1	79	47.861	Macaca_mulatta
ENSKMAG00000017546	si:dkey-85a20.4	71	48.262	ENSMNEG00000045002	TARBP1	79	47.861	Macaca_nemestrina
ENSKMAG00000017546	si:dkey-85a20.4	72	48.396	ENSMLEG00000044182	TARBP1	75	47.995	Mandrillus_leucophaeus
ENSKMAG00000017546	si:dkey-85a20.4	98	67.801	ENSMAMG00000021760	si:dkey-85a20.4	92	67.315	Mastacembelus_armatus
ENSKMAG00000017546	si:dkey-85a20.4	97	70.538	ENSMZEG00005005751	si:dkey-85a20.4	89	70.538	Maylandia_zebra
ENSKMAG00000017546	si:dkey-85a20.4	85	47.082	ENSMAUG00000020968	Tarbp1	79	47.082	Mesocricetus_auratus
ENSKMAG00000017546	si:dkey-85a20.4	73	43.461	ENSMICG00000015280	TARBP1	79	43.329	Microcebus_murinus
ENSKMAG00000017546	si:dkey-85a20.4	82	46.854	ENSMOCG00000004128	Tarbp1	78	46.854	Microtus_ochrogaster
ENSKMAG00000017546	si:dkey-85a20.4	95	72.222	ENSMMOG00000007795	si:dkey-85a20.4	86	67.410	Mola_mola
ENSKMAG00000017546	si:dkey-85a20.4	84	48.322	ENSMODG00000008504	TARBP1	80	48.193	Monodelphis_domestica
ENSKMAG00000017546	si:dkey-85a20.4	90	72.765	ENSMALG00000002916	si:dkey-85a20.4	88	72.765	Monopterus_albus
ENSKMAG00000017546	si:dkey-85a20.4	82	46.623	MGP_CAROLIEiJ_G0031729	Tarbp1	78	59.302	Mus_caroli
ENSKMAG00000017546	si:dkey-85a20.4	82	47.152	ENSMUSG00000090290	Tarbp1	79	47.152	Mus_musculus
ENSKMAG00000017546	si:dkey-85a20.4	81	47.248	MGP_PahariEiJ_G0023326	Tarbp1	79	47.248	Mus_pahari
ENSKMAG00000017546	si:dkey-85a20.4	82	47.563	MGP_SPRETEiJ_G0032846	Tarbp1	79	47.563	Mus_spretus
ENSKMAG00000017546	si:dkey-85a20.4	66	46.586	ENSMPUG00000002802	TARBP1	85	46.185	Mustela_putorius_furo
ENSKMAG00000017546	si:dkey-85a20.4	79	47.331	ENSMLUG00000002414	TARBP1	74	47.331	Myotis_lucifugus
ENSKMAG00000017546	si:dkey-85a20.4	71	48.396	ENSNLEG00000002518	TARBP1	71	47.995	Nomascus_leucogenys
ENSKMAG00000017546	si:dkey-85a20.4	68	51.933	ENSOPRG00000013822	TARBP1	58	51.429	Ochotona_princeps
ENSKMAG00000017546	si:dkey-85a20.4	77	47.390	ENSODEG00000005238	TARBP1	73	47.390	Octodon_degus
ENSKMAG00000017546	si:dkey-85a20.4	84	70.316	ENSONIG00000009789	si:dkey-85a20.4	88	70.316	Oreochromis_niloticus
ENSKMAG00000017546	si:dkey-85a20.4	77	46.123	ENSOCUG00000017418	TARBP1	80	45.335	Oryctolagus_cuniculus
ENSKMAG00000017546	si:dkey-85a20.4	96	69.697	ENSORLG00000010529	si:dkey-85a20.4	86	66.139	Oryzias_latipes
ENSKMAG00000017546	si:dkey-85a20.4	96	69.697	ENSORLG00020019264	si:dkey-85a20.4	86	65.652	Oryzias_latipes_hni
ENSKMAG00000017546	si:dkey-85a20.4	96	69.697	ENSORLG00015003276	si:dkey-85a20.4	86	65.530	Oryzias_latipes_hsok
ENSKMAG00000017546	si:dkey-85a20.4	74	45.026	ENSOGAG00000002379	TARBP1	80	44.634	Otolemur_garnettii
ENSKMAG00000017546	si:dkey-85a20.4	70	47.170	ENSOARG00000003434	TARBP1	77	46.693	Ovis_aries
ENSKMAG00000017546	si:dkey-85a20.4	72	48.529	ENSPPAG00000028097	TARBP1	75	48.128	Pan_paniscus
ENSKMAG00000017546	si:dkey-85a20.4	68	46.452	ENSPPRG00000013561	TARBP1	69	46.051	Panthera_pardus
ENSKMAG00000017546	si:dkey-85a20.4	72	46.452	ENSPTIG00000009281	TARBP1	75	46.051	Panthera_tigris_altaica
ENSKMAG00000017546	si:dkey-85a20.4	71	48.529	ENSPTRG00000002124	TARBP1	79	48.128	Pan_troglodytes
ENSKMAG00000017546	si:dkey-85a20.4	75	48.529	ENSPANG00000021933	TARBP1	79	48.128	Papio_anubis
ENSKMAG00000017546	si:dkey-85a20.4	90	60.509	ENSPKIG00000016716	si:dkey-85a20.4	85	60.375	Paramormyrops_kingsleyae
ENSKMAG00000017546	si:dkey-85a20.4	64	48.928	ENSPSIG00000010699	TARBP1	75	48.684	Pelodiscus_sinensis
ENSKMAG00000017546	si:dkey-85a20.4	74	47.908	ENSPEMG00000006888	Tarbp1	71	47.908	Peromyscus_maniculatus_bairdii
ENSKMAG00000017546	si:dkey-85a20.4	75	69.072	ENSPCIG00000029710	TARBP1	76	69.072	Phascolarctos_cinereus
ENSKMAG00000017546	si:dkey-85a20.4	76	70.545	ENSPFOG00000013020	si:dkey-85a20.4	89	70.545	Poecilia_formosa
ENSKMAG00000017546	si:dkey-85a20.4	98	71.133	ENSPLAG00000006044	si:dkey-85a20.4	89	71.133	Poecilia_latipinna
ENSKMAG00000017546	si:dkey-85a20.4	98	71.255	ENSPMEG00000017857	si:dkey-85a20.4	89	71.255	Poecilia_mexicana
ENSKMAG00000017546	si:dkey-85a20.4	98	70.767	ENSPREG00000022753	si:dkey-85a20.4	89	70.510	Poecilia_reticulata
ENSKMAG00000017546	si:dkey-85a20.4	59	56.410	ENSPPYG00000000102	TARBP1	76	56.410	Pongo_abelii
ENSKMAG00000017546	si:dkey-85a20.4	52	78.912	ENSPCAG00000004808	TARBP1	53	78.912	Procavia_capensis
ENSKMAG00000017546	si:dkey-85a20.4	71	45.661	ENSPCOG00000005666	TARBP1	72	45.323	Propithecus_coquereli
ENSKMAG00000017546	si:dkey-85a20.4	71	43.484	ENSPVAG00000014798	TARBP1	80	43.709	Pteropus_vampyrus
ENSKMAG00000017546	si:dkey-85a20.4	99	63.906	ENSPNYG00000019135	si:dkey-85a20.4	99	62.873	Pundamilia_nyererei
ENSKMAG00000017546	si:dkey-85a20.4	91	44.011	ENSRNOG00000053574	Tarbp1	79	44.011	Rattus_norvegicus
ENSKMAG00000017546	si:dkey-85a20.4	75	48.461	ENSRBIG00000043362	TARBP1	74	48.059	Rhinopithecus_bieti
ENSKMAG00000017546	si:dkey-85a20.4	71	48.461	ENSRROG00000029527	TARBP1	73	48.059	Rhinopithecus_roxellana
ENSKMAG00000017546	si:dkey-85a20.4	71	47.460	ENSSBOG00000034503	TARBP1	73	47.193	Saimiri_boliviensis_boliviensis
ENSKMAG00000017546	si:dkey-85a20.4	69	48.725	ENSSHAG00000000013	TARBP1	77	48.598	Sarcophilus_harrisii
ENSKMAG00000017546	si:dkey-85a20.4	87	57.160	ENSSFOG00015002660	si:dkey-85a20.4	88	62.331	Scleropages_formosus
ENSKMAG00000017546	si:dkey-85a20.4	99	63.063	ENSSMAG00000007081	si:dkey-85a20.4	89	68.049	Scophthalmus_maximus
ENSKMAG00000017546	si:dkey-85a20.4	93	73.204	ENSSDUG00000023566	si:dkey-85a20.4	93	68.401	Seriola_dumerili
ENSKMAG00000017546	si:dkey-85a20.4	97	71.429	ENSSLDG00000020200	si:dkey-85a20.4	88	71.429	Seriola_lalandi_dorsalis
ENSKMAG00000017546	si:dkey-85a20.4	60	57.407	ENSSARG00000012207	TARBP1	56	56.713	Sorex_araneus
ENSKMAG00000017546	si:dkey-85a20.4	87	48.677	ENSSPUG00000015364	TARBP1	84	48.413	Sphenodon_punctatus
ENSKMAG00000017546	si:dkey-85a20.4	98	72.296	ENSSPAG00000007213	si:dkey-85a20.4	89	72.296	Stegastes_partitus
ENSKMAG00000017546	si:dkey-85a20.4	90	47.791	ENSSSCG00000010160	TARBP1	80	47.791	Sus_scrofa
ENSKMAG00000017546	si:dkey-85a20.4	65	48.396	ENSTGUG00000010214	TARBP1	76	48.128	Taeniopygia_guttata
ENSKMAG00000017546	si:dkey-85a20.4	93	53.113	ENSTNIG00000016586	si:dkey-85a20.4	99	56.858	Tetraodon_nigroviridis
ENSKMAG00000017546	si:dkey-85a20.4	60	49.315	ENSTTRG00000008707	TARBP1	59	49.315	Tursiops_truncatus
ENSKMAG00000017546	si:dkey-85a20.4	71	45.490	ENSUMAG00000006730	TARBP1	83	45.490	Ursus_maritimus
ENSKMAG00000017546	si:dkey-85a20.4	52	74.194	ENSVPAG00000007665	TARBP1	54	74.194	Vicugna_pacos
ENSKMAG00000017546	si:dkey-85a20.4	73	46.720	ENSVVUG00000007460	TARBP1	87	45.061	Vulpes_vulpes
ENSKMAG00000017546	si:dkey-85a20.4	73	44.837	ENSXETG00000016224	tarbp1	76	44.706	Xenopus_tropicalis
ENSKMAG00000017546	si:dkey-85a20.4	77	73.889	ENSXCOG00000011779	si:dkey-85a20.4	92	73.889	Xiphophorus_couchianus
ENSKMAG00000017546	si:dkey-85a20.4	59	69.509	ENSXMAG00000009600	si:dkey-85a20.4	84	72.222	Xiphophorus_maculatus