EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017800 (Gene tree)
Gene ID: 108235290
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 12468 bases
Position: chrLWHD01000033.1:718551-731018
Accession: 108235290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024031	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024335	-	4567	XM_017415212	ENSKMAP00000024031	969 (aa)	XP_017270701	UPI0007F8DD13

Gene Model

Click here to download ENSKMAG00000017800's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017800	prpf6	96	92.349	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSKMAG00000017800	prpf6	100	98.246	ENSAPOG00000010395	prpf6	100	98.246	Acanthochromis_polyacanthus
ENSKMAG00000017800	prpf6	96	91.826	ENSAMEG00000001916	PRPF6	99	91.401	Ailuropoda_melanoleuca
ENSKMAG00000017800	prpf6	100	97.730	ENSACIG00000019862	prpf6	100	97.730	Amphilophus_citrinellus
ENSKMAG00000017800	prpf6	100	98.349	ENSAOCG00000012988	prpf6	100	98.349	Amphiprion_ocellaris
ENSKMAG00000017800	prpf6	96	91.828	ENSAPEG00000008301	prpf6	100	91.935	Amphiprion_percula
ENSKMAG00000017800	prpf6	100	97.626	ENSATEG00000005581	prpf6	100	97.626	Anabas_testudineus
ENSKMAG00000017800	prpf6	96	92.667	ENSACAG00000006464	PRPF6	95	92.242	Anolis_carolinensis
ENSKMAG00000017800	prpf6	96	92.349	ENSANAG00000012661	PRPF6	100	92.815	Aotus_nancymaae
ENSKMAG00000017800	prpf6	100	97.730	ENSACLG00000025875	prpf6	100	97.730	Astatotilapia_calliptera
ENSKMAG00000017800	prpf6	97	94.280	ENSAMXG00000001929	prpf6	97	94.280	Astyanax_mexicanus
ENSKMAG00000017800	prpf6	96	92.774	ENSBTAG00000011656	PRPF6	100	92.349	Bos_taurus
ENSKMAG00000017800	prpf6	96	92.349	ENSCJAG00000010616	PRPF6	100	91.923	Callithrix_jacchus
ENSKMAG00000017800	prpf6	96	92.880	ENSCAFG00000013165	PRPF6	100	92.455	Canis_familiaris
ENSKMAG00000017800	prpf6	96	92.880	ENSCAFG00020002050	PRPF6	100	92.455	Canis_lupus_dingo
ENSKMAG00000017800	prpf6	96	92.774	ENSCHIG00000018187	PRPF6	100	92.349	Capra_hircus
ENSKMAG00000017800	prpf6	96	92.667	ENSTSYG00000007814	PRPF6	100	92.242	Carlito_syrichta
ENSKMAG00000017800	prpf6	93	91.821	ENSCAPG00000015077	PRPF6	100	90.949	Cavia_aperea
ENSKMAG00000017800	prpf6	96	92.986	ENSCPOG00000007518	PRPF6	100	92.561	Cavia_porcellus
ENSKMAG00000017800	prpf6	96	89.479	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSKMAG00000017800	prpf6	96	92.455	ENSCATG00000037473	PRPF6	100	92.030	Cercocebus_atys
ENSKMAG00000017800	prpf6	96	89.160	ENSCLAG00000003854	PRPF6	100	88.735	Chinchilla_lanigera
ENSKMAG00000017800	prpf6	96	87.856	ENSCSAG00000016742	PRPF6	100	87.434	Chlorocebus_sabaeus
ENSKMAG00000017800	prpf6	81	78.211	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSKMAG00000017800	prpf6	98	91.571	ENSCPBG00000013964	PRPF6	96	92.553	Chrysemys_picta_bellii
ENSKMAG00000017800	prpf6	96	72.939	ENSCING00000008817	-	99	72.516	Ciona_intestinalis
ENSKMAG00000017800	prpf6	96	92.242	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSKMAG00000017800	prpf6	96	92.986	ENSCGRG00001022666	Prpf6	100	92.561	Cricetulus_griseus_chok1gshd
ENSKMAG00000017800	prpf6	96	92.366	ENSCSEG00000018561	prpf6	100	92.366	Cynoglossus_semilaevis
ENSKMAG00000017800	prpf6	100	96.594	ENSCVAG00000010550	prpf6	100	96.594	Cyprinodon_variegatus
ENSKMAG00000017800	prpf6	100	92.930	ENSDARG00000091367	prpf6	100	94.386	Danio_rerio
ENSKMAG00000017800	prpf6	96	92.242	ENSDNOG00000040544	PRPF6	100	91.923	Dasypus_novemcinctus
ENSKMAG00000017800	prpf6	87	92.523	ENSDORG00000005406	Prpf6	100	92.523	Dipodomys_ordii
ENSKMAG00000017800	prpf6	96	71.828	FBgn0036828	CG6841	99	71.935	Drosophila_melanogaster
ENSKMAG00000017800	prpf6	83	91.374	ENSETEG00000004447	PRPF6	85	91.374	Echinops_telfairi
ENSKMAG00000017800	prpf6	96	86.138	ENSEBUG00000008835	prpf6	100	85.714	Eptatretus_burgeri
ENSKMAG00000017800	prpf6	99	90.712	ENSEASG00005023115	PRPF6	100	92.561	Equus_asinus_asinus
ENSKMAG00000017800	prpf6	96	88.735	ENSECAG00000013983	PRPF6	100	88.310	Equus_caballus
ENSKMAG00000017800	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSKMAG00000017800	prpf6	97	94.804	ENSELUG00000001945	prpf6	94	94.804	Esox_lucius
ENSKMAG00000017800	prpf6	96	92.880	ENSFCAG00000001183	PRPF6	100	92.455	Felis_catus
ENSKMAG00000017800	prpf6	96	92.593	ENSFALG00000010326	-	98	92.275	Ficedula_albicollis
ENSKMAG00000017800	prpf6	96	86.489	ENSFALG00000006046	-	97	86.489	Ficedula_albicollis
ENSKMAG00000017800	prpf6	96	91.498	ENSFDAG00000006451	PRPF6	100	91.073	Fukomys_damarensis
ENSKMAG00000017800	prpf6	99	97.308	ENSFHEG00000000560	prpf6	99	97.308	Fundulus_heteroclitus
ENSKMAG00000017800	prpf6	97	93.955	ENSGMOG00000015622	prpf6	99	93.425	Gadus_morhua
ENSKMAG00000017800	prpf6	96	92.880	ENSGALG00000006001	PRPF6	100	92.561	Gallus_gallus
ENSKMAG00000017800	prpf6	100	92.776	ENSGAFG00000021109	prpf6	99	93.006	Gambusia_affinis
ENSKMAG00000017800	prpf6	97	95.445	ENSGACG00000002576	prpf6	100	95.445	Gasterosteus_aculeatus
ENSKMAG00000017800	prpf6	98	91.667	ENSGAGG00000008653	PRPF6	96	92.660	Gopherus_agassizii
ENSKMAG00000017800	prpf6	96	92.349	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSKMAG00000017800	prpf6	100	97.730	ENSHBUG00000004496	prpf6	100	97.730	Haplochromis_burtoni
ENSKMAG00000017800	prpf6	96	92.880	ENSHGLG00000009222	PRPF6	100	92.455	Heterocephalus_glaber_female
ENSKMAG00000017800	prpf6	93	92.803	ENSHGLG00100016600	PRPF6	100	92.366	Heterocephalus_glaber_male
ENSKMAG00000017800	prpf6	100	95.666	ENSHCOG00000011513	prpf6	97	97.021	Hippocampus_comes
ENSKMAG00000017800	prpf6	100	92.710	ENSIPUG00000004912	prpf6	97	94.492	Ictalurus_punctatus
ENSKMAG00000017800	prpf6	96	90.446	ENSSTOG00000002922	PRPF6	100	89.597	Ictidomys_tridecemlineatus
ENSKMAG00000017800	prpf6	96	92.986	ENSJJAG00000000836	Prpf6	100	92.561	Jaculus_jaculus
ENSKMAG00000017800	prpf6	100	96.801	ENSLBEG00000012582	prpf6	100	96.801	Labrus_bergylta
ENSKMAG00000017800	prpf6	98	92.500	ENSLOCG00000004827	prpf6	96	92.128	Lepisosteus_oculatus
ENSKMAG00000017800	prpf6	96	92.242	ENSLAFG00000005272	PRPF6	100	91.817	Loxodonta_africana
ENSKMAG00000017800	prpf6	96	92.242	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSKMAG00000017800	prpf6	96	86.306	ENSMMUG00000015558	PRPF6	95	94.652	Macaca_mulatta
ENSKMAG00000017800	prpf6	96	79.873	ENSMNEG00000045555	PRPF6	100	79.449	Macaca_nemestrina
ENSKMAG00000017800	prpf6	100	97.730	ENSMAMG00000010718	prpf6	100	97.730	Mastacembelus_armatus
ENSKMAG00000017800	prpf6	90	97.943	ENSMZEG00005026539	prpf6	100	97.943	Maylandia_zebra
ENSKMAG00000017800	prpf6	97	98.081	ENSMZEG00005015261	-	100	98.081	Maylandia_zebra
ENSKMAG00000017800	prpf6	93	93.021	ENSMGAG00000006634	PRPF6	100	92.694	Meleagris_gallopavo
ENSKMAG00000017800	prpf6	96	92.986	ENSMAUG00000013969	Prpf6	100	92.561	Mesocricetus_auratus
ENSKMAG00000017800	prpf6	84	91.727	ENSMICG00000017793	PRPF6	98	91.739	Microcebus_murinus
ENSKMAG00000017800	prpf6	96	92.880	ENSMOCG00000001701	Prpf6	100	92.455	Microtus_ochrogaster
ENSKMAG00000017800	prpf6	96	97.419	ENSMMOG00000020419	prpf6	100	97.419	Mola_mola
ENSKMAG00000017800	prpf6	93	92.927	ENSMODG00000017051	PRPF6	99	92.439	Monodelphis_domestica
ENSKMAG00000017800	prpf6	95	98.043	ENSMALG00000000089	prpf6	100	98.043	Monopterus_albus
ENSKMAG00000017800	prpf6	96	86.716	MGP_CAROLIEiJ_G0024814	Prpf6	100	85.866	Mus_caroli
ENSKMAG00000017800	prpf6	96	92.986	ENSMUSG00000002455	Prpf6	100	92.561	Mus_musculus
ENSKMAG00000017800	prpf6	96	92.986	MGP_PahariEiJ_G0026262	Prpf6	100	92.561	Mus_pahari
ENSKMAG00000017800	prpf6	96	92.986	MGP_SPRETEiJ_G0025741	Prpf6	100	92.561	Mus_spretus
ENSKMAG00000017800	prpf6	87	92.849	ENSMPUG00000008673	PRPF6	99	92.372	Mustela_putorius_furo
ENSKMAG00000017800	prpf6	96	93.092	ENSNGAG00000003365	Prpf6	100	92.667	Nannospalax_galili
ENSKMAG00000017800	prpf6	100	97.833	ENSNBRG00000015025	prpf6	100	97.833	Neolamprologus_brichardi
ENSKMAG00000017800	prpf6	96	92.242	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSKMAG00000017800	prpf6	96	83.735	ENSMEUG00000009824	-	90	83.992	Notamacropus_eugenii
ENSKMAG00000017800	prpf6	96	87.141	ENSODEG00000004841	PRPF6	100	86.716	Octodon_degus
ENSKMAG00000017800	prpf6	100	97.936	ENSONIG00000017406	prpf6	100	97.936	Oreochromis_niloticus
ENSKMAG00000017800	prpf6	96	92.880	ENSOANG00000004920	PRPF6	100	92.455	Ornithorhynchus_anatinus
ENSKMAG00000017800	prpf6	95	90.773	ENSOCUG00000014151	PRPF6	100	90.343	Oryctolagus_cuniculus
ENSKMAG00000017800	prpf6	100	96.491	ENSORLG00000009592	prpf6	100	96.491	Oryzias_latipes
ENSKMAG00000017800	prpf6	100	96.594	ENSORLG00020001458	prpf6	100	96.594	Oryzias_latipes_hni
ENSKMAG00000017800	prpf6	100	96.594	ENSORLG00015018762	prpf6	100	96.594	Oryzias_latipes_hsok
ENSKMAG00000017800	prpf6	100	97.317	ENSOMEG00000012174	prpf6	100	97.317	Oryzias_melastigma
ENSKMAG00000017800	prpf6	96	85.775	ENSOGAG00000007573	PRPF6	100	85.350	Otolemur_garnettii
ENSKMAG00000017800	prpf6	96	92.349	ENSOARG00000008776	PRPF6	99	91.923	Ovis_aries
ENSKMAG00000017800	prpf6	96	92.349	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSKMAG00000017800	prpf6	96	92.880	ENSPPRG00000008497	PRPF6	100	92.455	Panthera_pardus
ENSKMAG00000017800	prpf6	93	92.803	ENSPTIG00000011184	PRPF6	97	92.366	Panthera_tigris_altaica
ENSKMAG00000017800	prpf6	96	92.349	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSKMAG00000017800	prpf6	96	92.030	ENSPANG00000024135	PRPF6	100	91.605	Papio_anubis
ENSKMAG00000017800	prpf6	98	93.139	ENSPKIG00000005627	prpf6	99	94.362	Paramormyrops_kingsleyae
ENSKMAG00000017800	prpf6	88	92.725	ENSPSIG00000007717	PRPF6	98	92.725	Pelodiscus_sinensis
ENSKMAG00000017800	prpf6	100	95.361	ENSPMGG00000008925	prpf6	100	95.361	Periophthalmus_magnuspinnatus
ENSKMAG00000017800	prpf6	96	92.986	ENSPEMG00000016036	Prpf6	100	92.561	Peromyscus_maniculatus_bairdii
ENSKMAG00000017800	prpf6	97	87.671	ENSPMAG00000006144	prpf6	100	87.671	Petromyzon_marinus
ENSKMAG00000017800	prpf6	96	93.199	ENSPCIG00000017909	PRPF6	100	92.774	Phascolarctos_cinereus
ENSKMAG00000017800	prpf6	100	96.524	ENSPFOG00000006431	prpf6	99	96.524	Poecilia_formosa
ENSKMAG00000017800	prpf6	100	97.317	ENSPLAG00000005974	prpf6	100	97.317	Poecilia_latipinna
ENSKMAG00000017800	prpf6	100	97.523	ENSPMEG00000009977	prpf6	100	97.523	Poecilia_mexicana
ENSKMAG00000017800	prpf6	100	97.214	ENSPREG00000017993	prpf6	95	97.214	Poecilia_reticulata
ENSKMAG00000017800	prpf6	96	91.817	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSKMAG00000017800	prpf6	91	95.098	ENSPCAG00000006536	PRPF6	88	94.444	Procavia_capensis
ENSKMAG00000017800	prpf6	96	92.136	ENSPCOG00000016881	PRPF6	100	91.711	Propithecus_coquereli
ENSKMAG00000017800	prpf6	96	86.823	ENSPVAG00000014316	PRPF6	100	86.397	Pteropus_vampyrus
ENSKMAG00000017800	prpf6	100	84.086	ENSPNYG00000001939	prpf6	99	84.320	Pundamilia_nyererei
ENSKMAG00000017800	prpf6	97	95.551	ENSPNAG00000015606	prpf6	97	95.551	Pygocentrus_nattereri
ENSKMAG00000017800	prpf6	96	92.880	ENSRNOG00000051498	Prpf6	100	92.455	Rattus_norvegicus
ENSKMAG00000017800	prpf6	96	92.242	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSKMAG00000017800	prpf6	96	89.312	ENSRROG00000040969	PRPF6	100	88.889	Rhinopithecus_roxellana
ENSKMAG00000017800	prpf6	86	89.982	ENSSBOG00000020632	PRPF6	90	88.434	Saimiri_boliviensis_boliviensis
ENSKMAG00000017800	prpf6	96	93.199	ENSSHAG00000016810	PRPF6	100	92.774	Sarcophilus_harrisii
ENSKMAG00000017800	prpf6	95	94.946	ENSSFOG00015020859	prpf6	100	94.516	Scleropages_formosus
ENSKMAG00000017800	prpf6	100	95.872	ENSSMAG00000008112	prpf6	97	97.021	Scophthalmus_maximus
ENSKMAG00000017800	prpf6	100	97.730	ENSSDUG00000016142	prpf6	100	97.730	Seriola_dumerili
ENSKMAG00000017800	prpf6	100	97.730	ENSSLDG00000025283	prpf6	99	97.730	Seriola_lalandi_dorsalis
ENSKMAG00000017800	prpf6	88	92.139	ENSSPUG00000018260	PRPF6	98	92.139	Sphenodon_punctatus
ENSKMAG00000017800	prpf6	100	97.936	ENSSPAG00000015850	prpf6	100	97.936	Stegastes_partitus
ENSKMAG00000017800	prpf6	97	91.414	ENSSSCG00000029119	PRPF6	100	91.610	Sus_scrofa
ENSKMAG00000017800	prpf6	96	92.691	ENSTGUG00000007221	PRPF6	100	92.373	Taeniopygia_guttata
ENSKMAG00000017800	prpf6	100	96.594	ENSTRUG00000002920	prpf6	100	96.594	Takifugu_rubripes
ENSKMAG00000017800	prpf6	96	90.436	ENSTNIG00000017873	prpf6	100	90.436	Tetraodon_nigroviridis
ENSKMAG00000017800	prpf6	85	93.889	ENSTBEG00000005348	PRPF6	85	91.667	Tupaia_belangeri
ENSKMAG00000017800	prpf6	96	92.561	ENSTTRG00000013068	PRPF6	100	92.136	Tursiops_truncatus
ENSKMAG00000017800	prpf6	98	88.345	ENSUMAG00000021631	PRPF6	98	90.870	Ursus_maritimus
ENSKMAG00000017800	prpf6	96	92.880	ENSVVUG00000014948	PRPF6	100	92.455	Vulpes_vulpes
ENSKMAG00000017800	prpf6	96	92.447	ENSXETG00000012054	prpf6	97	92.021	Xenopus_tropicalis
ENSKMAG00000017800	prpf6	100	97.626	ENSXCOG00000008082	prpf6	100	97.626	Xiphophorus_couchianus
ENSKMAG00000017800	prpf6	100	97.730	ENSXMAG00000015581	prpf6	100	97.730	Xiphophorus_maculatus