EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000017950 (Gene tree)
Gene ID: 108250141
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 24696 bases
Position: chrLWHD01000558.1:31257-55952
Accession: 108250141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024212	DUF1604	PF07713.13	3.7e-37	1	1
ENSKMAP00000024212	G-patch	PF01585.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024518	-	2889	XM_017439879	ENSKMAP00000024212	942 (aa)	XP_017295368	UPI0007F8ADA2

Gene Model

Click here to download ENSKMAG00000017950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000017950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000017950	gpatch1	89	51.435	ENSG00000076650	GPATCH1	81	71.154	Homo_sapiens
ENSKMAG00000017950	gpatch1	89	52.028	ENSAMEG00000015575	GPATCH1	89	51.800	Ailuropoda_melanoleuca
ENSKMAG00000017950	gpatch1	82	90.659	ENSAOCG00000006668	gpatch1	100	66.701	Amphiprion_ocellaris
ENSKMAG00000017950	gpatch1	100	68.480	ENSAPEG00000000026	gpatch1	100	67.979	Amphiprion_percula
ENSKMAG00000017950	gpatch1	100	70.674	ENSATEG00000014494	gpatch1	100	73.416	Anabas_testudineus
ENSKMAG00000017950	gpatch1	91	49.073	ENSAPLG00000007584	GPATCH1	85	51.715	Anas_platyrhynchos
ENSKMAG00000017950	gpatch1	89	51.784	ENSANAG00000027002	GPATCH1	90	51.977	Aotus_nancymaae
ENSKMAG00000017950	gpatch1	86	76.951	ENSACLG00000024740	gpatch1	85	77.664	Astatotilapia_calliptera
ENSKMAG00000017950	gpatch1	93	54.632	ENSAMXG00000020177	gpatch1	86	58.507	Astyanax_mexicanus
ENSKMAG00000017950	gpatch1	89	51.684	ENSBTAG00000000721	GPATCH1	90	51.860	Bos_taurus
ENSKMAG00000017950	gpatch1	68	30.963	WBGene00011109	R07E5.1	69	30.325	Caenorhabditis_elegans
ENSKMAG00000017950	gpatch1	89	51.669	ENSCJAG00000000684	GPATCH1	90	51.860	Callithrix_jacchus
ENSKMAG00000017950	gpatch1	89	51.448	ENSCAFG00000007457	GPATCH1	75	51.505	Canis_familiaris
ENSKMAG00000017950	gpatch1	89	51.448	ENSCAFG00020019731	GPATCH1	90	51.505	Canis_lupus_dingo
ENSKMAG00000017950	gpatch1	89	52.674	ENSCHIG00000019626	GPATCH1	99	49.789	Capra_hircus
ENSKMAG00000017950	gpatch1	87	49.462	ENSCAPG00000008827	GPATCH1	89	48.810	Cavia_aperea
ENSKMAG00000017950	gpatch1	89	50.757	ENSCPOG00000024477	GPATCH1	89	48.045	Cavia_porcellus
ENSKMAG00000017950	gpatch1	89	51.264	ENSCCAG00000024676	GPATCH1	90	51.744	Cebus_capucinus
ENSKMAG00000017950	gpatch1	89	52.529	ENSCATG00000043637	GPATCH1	81	72.115	Cercocebus_atys
ENSKMAG00000017950	gpatch1	91	49.539	ENSCLAG00000003395	-	90	50.784	Chinchilla_lanigera
ENSKMAG00000017950	gpatch1	89	50.114	ENSCSAG00000004743	GPATCH1	90	50.346	Chlorocebus_sabaeus
ENSKMAG00000017950	gpatch1	82	45.614	ENSCHOG00000012865	GPATCH1	89	45.707	Choloepus_hoffmanni
ENSKMAG00000017950	gpatch1	79	53.704	ENSCPBG00000000666	GPATCH1	92	53.836	Chrysemys_picta_bellii
ENSKMAG00000017950	gpatch1	68	36.980	ENSCING00000012518	-	74	36.980	Ciona_intestinalis
ENSKMAG00000017950	gpatch1	79	51.494	ENSCANG00000012540	GPATCH1	87	51.972	Colobus_angolensis_palliatus
ENSKMAG00000017950	gpatch1	87	52.449	ENSCGRG00001016736	Gpatch1	80	54.316	Cricetulus_griseus_chok1gshd
ENSKMAG00000017950	gpatch1	79	46.789	ENSCGRG00000005069	Gpatch1	77	46.490	Cricetulus_griseus_crigri
ENSKMAG00000017950	gpatch1	90	48.894	ENSCSEG00000019456	-	88	75.221	Cynoglossus_semilaevis
ENSKMAG00000017950	gpatch1	90	56.087	ENSDARG00000033418	gpatch1	81	59.433	Danio_rerio
ENSKMAG00000017950	gpatch1	89	52.797	ENSDNOG00000005291	GPATCH1	93	51.991	Dasypus_novemcinctus
ENSKMAG00000017950	gpatch1	89	49.942	ENSDORG00000012546	Gpatch1	93	49.709	Dipodomys_ordii
ENSKMAG00000017950	gpatch1	69	33.142	FBgn0036386	CG8833	67	33.669	Drosophila_melanogaster
ENSKMAG00000017950	gpatch1	89	48.766	ENSETEG00000003626	GPATCH1	72	54.154	Echinops_telfairi
ENSKMAG00000017950	gpatch1	95	37.018	ENSEBUG00000011286	gpatch1	72	42.587	Eptatretus_burgeri
ENSKMAG00000017950	gpatch1	90	52.408	ENSEASG00005021162	GPATCH1	92	52.018	Equus_asinus_asinus
ENSKMAG00000017950	gpatch1	89	52.839	ENSECAG00000022743	GPATCH1	87	52.326	Equus_caballus
ENSKMAG00000017950	gpatch1	73	53.960	ENSEEUG00000012925	GPATCH1	73	53.960	Erinaceus_europaeus
ENSKMAG00000017950	gpatch1	99	54.995	ENSELUG00000018195	gpatch1	80	59.057	Esox_lucius
ENSKMAG00000017950	gpatch1	89	51.740	ENSFCAG00000014917	GPATCH1	89	51.800	Felis_catus
ENSKMAG00000017950	gpatch1	89	51.147	ENSFALG00000007821	GPATCH1	89	50.978	Ficedula_albicollis
ENSKMAG00000017950	gpatch1	92	49.610	ENSFDAG00000003871	GPATCH1	90	51.319	Fukomys_damarensis
ENSKMAG00000017950	gpatch1	89	63.134	ENSGMOG00000003830	gpatch1	96	51.813	Gadus_morhua
ENSKMAG00000017950	gpatch1	96	48.654	ENSGALG00000004839	GPATCH1	97	49.837	Gallus_gallus
ENSKMAG00000017950	gpatch1	90	66.782	ENSGACG00000017544	gpatch1	95	65.306	Gasterosteus_aculeatus
ENSKMAG00000017950	gpatch1	90	51.323	ENSGAGG00000010067	GPATCH1	81	52.625	Gopherus_agassizii
ENSKMAG00000017950	gpatch1	87	50.888	ENSGGOG00000010862	GPATCH1	89	50.957	Gorilla_gorilla
ENSKMAG00000017950	gpatch1	100	72.755	ENSHBUG00000023462	gpatch1	100	72.107	Haplochromis_burtoni
ENSKMAG00000017950	gpatch1	89	51.744	ENSHGLG00000009334	GPATCH1	89	50.935	Heterocephalus_glaber_female
ENSKMAG00000017950	gpatch1	89	51.628	ENSHGLG00100018074	GPATCH1	89	50.818	Heterocephalus_glaber_male
ENSKMAG00000017950	gpatch1	94	57.097	ENSIPUG00000014977	gpatch1	99	55.131	Ictalurus_punctatus
ENSKMAG00000017950	gpatch1	89	52.326	ENSSTOG00000003720	GPATCH1	89	52.564	Ictidomys_tridecemlineatus
ENSKMAG00000017950	gpatch1	89	53.085	ENSJJAG00000023765	Gpatch1	90	52.852	Jaculus_jaculus
ENSKMAG00000017950	gpatch1	93	70.374	ENSLBEG00000026527	gpatch1	91	70.197	Labrus_bergylta
ENSKMAG00000017950	gpatch1	89	51.564	ENSLACG00000008130	GPATCH1	92	52.535	Latimeria_chalumnae
ENSKMAG00000017950	gpatch1	82	57.687	ENSLOCG00000001800	gpatch1	81	57.034	Lepisosteus_oculatus
ENSKMAG00000017950	gpatch1	96	49.728	ENSLAFG00000013589	GPATCH1	89	52.093	Loxodonta_africana
ENSKMAG00000017950	gpatch1	91	51.419	ENSMFAG00000034418	GPATCH1	81	72.115	Macaca_fascicularis
ENSKMAG00000017950	gpatch1	89	51.491	ENSMMUG00000011790	GPATCH1	81	71.154	Macaca_mulatta
ENSKMAG00000017950	gpatch1	89	51.435	ENSMNEG00000045084	GPATCH1	81	70.192	Macaca_nemestrina
ENSKMAG00000017950	gpatch1	89	44.713	ENSMLEG00000043840	GPATCH1	88	44.496	Mandrillus_leucophaeus
ENSKMAG00000017950	gpatch1	86	76.829	ENSMZEG00005001926	gpatch1	86	77.535	Maylandia_zebra
ENSKMAG00000017950	gpatch1	91	49.943	ENSMGAG00000005775	GPATCH1	89	48.980	Meleagris_gallopavo
ENSKMAG00000017950	gpatch1	89	45.270	ENSMICG00000004829	GPATCH1	92	46.250	Microcebus_murinus
ENSKMAG00000017950	gpatch1	89	52.254	ENSMOCG00000000174	Gpatch1	90	51.792	Microtus_ochrogaster
ENSKMAG00000017950	gpatch1	93	66.442	ENSMMOG00000002140	gpatch1	87	70.000	Mola_mola
ENSKMAG00000017950	gpatch1	89	50.115	ENSMODG00000012226	GPATCH1	89	50.573	Monodelphis_domestica
ENSKMAG00000017950	gpatch1	100	70.921	ENSMALG00000014386	gpatch1	100	70.293	Monopterus_albus
ENSKMAG00000017950	gpatch1	93	50.948	ENSMUSG00000063808	Gpatch1	98	75.000	Mus_musculus
ENSKMAG00000017950	gpatch1	93	50.664	MGP_PahariEiJ_G0012816	Gpatch1	98	76.042	Mus_pahari
ENSKMAG00000017950	gpatch1	93	50.891	MGP_SPRETEiJ_G0030681	Gpatch1	98	76.042	Mus_spretus
ENSKMAG00000017950	gpatch1	89	52.552	ENSMPUG00000007658	GPATCH1	89	51.339	Mustela_putorius_furo
ENSKMAG00000017950	gpatch1	89	51.455	ENSMLUG00000012161	GPATCH1	90	51.748	Myotis_lucifugus
ENSKMAG00000017950	gpatch1	89	52.852	ENSNGAG00000012455	Gpatch1	90	52.515	Nannospalax_galili
ENSKMAG00000017950	gpatch1	89	52.239	ENSNLEG00000007659	GPATCH1	81	71.154	Nomascus_leucogenys
ENSKMAG00000017950	gpatch1	75	47.832	ENSMEUG00000015174	GPATCH1	76	47.552	Notamacropus_eugenii
ENSKMAG00000017950	gpatch1	89	50.288	ENSODEG00000007103	GPATCH1	81	52.284	Octodon_degus
ENSKMAG00000017950	gpatch1	100	72.539	ENSONIG00000003302	gpatch1	100	72.435	Oreochromis_niloticus
ENSKMAG00000017950	gpatch1	89	52.189	ENSOANG00000012732	GPATCH1	82	52.837	Ornithorhynchus_anatinus
ENSKMAG00000017950	gpatch1	89	52.503	ENSOCUG00000015905	GPATCH1	89	51.632	Oryctolagus_cuniculus
ENSKMAG00000017950	gpatch1	92	69.346	ENSORLG00000018706	gpatch1	99	65.524	Oryzias_latipes
ENSKMAG00000017950	gpatch1	92	68.265	ENSOMEG00000022688	gpatch1	99	66.282	Oryzias_melastigma
ENSKMAG00000017950	gpatch1	84	53.358	ENSOGAG00000004016	GPATCH1	96	53.316	Otolemur_garnettii
ENSKMAG00000017950	gpatch1	89	52.576	ENSOARG00000004365	GPATCH1	89	52.459	Ovis_aries
ENSKMAG00000017950	gpatch1	89	51.494	ENSPPAG00000020990	GPATCH1	81	70.476	Pan_paniscus
ENSKMAG00000017950	gpatch1	89	51.740	ENSPPRG00000017245	GPATCH1	89	51.800	Panthera_pardus
ENSKMAG00000017950	gpatch1	89	52.260	ENSPTIG00000019649	GPATCH1	89	52.381	Panthera_tigris_altaica
ENSKMAG00000017950	gpatch1	89	51.494	ENSPTRG00000010803	GPATCH1	81	71.154	Pan_troglodytes
ENSKMAG00000017950	gpatch1	89	51.665	ENSPANG00000012374	GPATCH1	81	72.115	Papio_anubis
ENSKMAG00000017950	gpatch1	81	58.281	ENSPKIG00000020745	gpatch1	77	58.500	Paramormyrops_kingsleyae
ENSKMAG00000017950	gpatch1	82	53.384	ENSPSIG00000013433	GPATCH1	81	53.384	Pelodiscus_sinensis
ENSKMAG00000017950	gpatch1	89	52.613	ENSPEMG00000000636	Gpatch1	81	53.954	Peromyscus_maniculatus_bairdii
ENSKMAG00000017950	gpatch1	89	50.987	ENSPCIG00000021003	GPATCH1	94	50.524	Phascolarctos_cinereus
ENSKMAG00000017950	gpatch1	70	64.095	ENSPREG00000008264	gpatch1	80	64.095	Poecilia_reticulata
ENSKMAG00000017950	gpatch1	89	50.573	ENSPPYG00000009824	GPATCH1	89	50.287	Pongo_abelii
ENSKMAG00000017950	gpatch1	76	50.857	ENSPCAG00000005931	GPATCH1	81	50.986	Procavia_capensis
ENSKMAG00000017950	gpatch1	93	49.556	ENSPCOG00000009674	GPATCH1	97	49.201	Propithecus_coquereli
ENSKMAG00000017950	gpatch1	75	52.479	ENSPVAG00000017767	GPATCH1	77	52.072	Pteropus_vampyrus
ENSKMAG00000017950	gpatch1	86	77.111	ENSPNYG00000018189	gpatch1	89	77.706	Pundamilia_nyererei
ENSKMAG00000017950	gpatch1	90	55.895	ENSPNAG00000013187	gpatch1	99	53.340	Pygocentrus_nattereri
ENSKMAG00000017950	gpatch1	89	52.093	ENSRNOG00000011584	Gpatch1	89	52.093	Rattus_norvegicus
ENSKMAG00000017950	gpatch1	89	46.269	ENSRBIG00000034723	GPATCH1	91	46.234	Rhinopithecus_bieti
ENSKMAG00000017950	gpatch1	89	51.435	ENSRROG00000024428	GPATCH1	81	71.154	Rhinopithecus_roxellana
ENSKMAG00000017950	gpatch1	89	51.435	ENSSBOG00000034650	GPATCH1	90	51.624	Saimiri_boliviensis_boliviensis
ENSKMAG00000017950	gpatch1	92	49.944	ENSSHAG00000016016	GPATCH1	90	50.116	Sarcophilus_harrisii
ENSKMAG00000017950	gpatch1	82	58.728	ENSSFOG00015011535	gpatch1	80	58.344	Scleropages_formosus
ENSKMAG00000017950	gpatch1	100	63.699	ENSSMAG00000002883	gpatch1	100	63.636	Scophthalmus_maximus
ENSKMAG00000017950	gpatch1	100	69.548	ENSSDUG00000007444	gpatch1	100	70.404	Seriola_dumerili
ENSKMAG00000017950	gpatch1	82	76.448	ENSSLDG00000002856	gpatch1	89	75.819	Seriola_lalandi_dorsalis
ENSKMAG00000017950	gpatch1	72	56.241	ENSSARG00000004108	GPATCH1	72	56.130	Sorex_araneus
ENSKMAG00000017950	gpatch1	89	51.684	ENSSSCG00000002865	GPATCH1	92	51.744	Sus_scrofa
ENSKMAG00000017950	gpatch1	90	51.042	ENSTGUG00000009401	GPATCH1	91	51.452	Taeniopygia_guttata
ENSKMAG00000017950	gpatch1	99	64.038	ENSTRUG00000005785	-	99	63.771	Takifugu_rubripes
ENSKMAG00000017950	gpatch1	99	64.143	ENSTRUG00000025081	gpatch1	99	63.877	Takifugu_rubripes
ENSKMAG00000017950	gpatch1	82	67.176	ENSTNIG00000002554	gpatch1	97	66.709	Tetraodon_nigroviridis
ENSKMAG00000017950	gpatch1	59	54.545	ENSTBEG00000007750	-	77	54.545	Tupaia_belangeri
ENSKMAG00000017950	gpatch1	89	46.279	ENSTTRG00000012221	GPATCH1	89	46.333	Tursiops_truncatus
ENSKMAG00000017950	gpatch1	91	51.536	ENSUMAG00000014645	GPATCH1	77	76.042	Ursus_maritimus
ENSKMAG00000017950	gpatch1	78	67.630	ENSVPAG00000010313	GPATCH1	84	67.956	Vicugna_pacos
ENSKMAG00000017950	gpatch1	89	51.220	ENSVVUG00000016572	GPATCH1	90	51.392	Vulpes_vulpes
ENSKMAG00000017950	gpatch1	99	44.286	ENSXETG00000018276	gpatch1	84	49.057	Xenopus_tropicalis