EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018155 (Gene tree)
Gene ID: 108230459
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 105808 bases
Position: chrLWHD01000008.1:6590682-6696489
Accession: 108230459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024492	RRM_1	PF00076.22	9.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024799	-	5011	XM_017406714	ENSKMAP00000024492	292 (aa)	XP_017262203	UPI0007F883DE

Gene Model

Click here to download ENSKMAG00000018155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018155	-	100	70.946	ENSKMAG00000022093	-	100	72.297
ENSKMAG00000018155	-	74	52.995	ENSKMAG00000015656	raly	79	54.378
ENSKMAG00000018155	-	73	57.991	ENSKMAG00000018265	-	66	60.538
ENSKMAG00000018155	-	74	57.727	ENSKMAG00000011170	-	97	49.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018155	-	100	73.986	ENSAPOG00000008744	-	100	72.635	Acanthochromis_polyacanthus
ENSKMAG00000018155	-	97	67.010	ENSACIG00000007143	-	97	67.010	Amphilophus_citrinellus
ENSKMAG00000018155	-	100	95.890	ENSAOCG00000001605	-	100	95.890	Amphiprion_ocellaris
ENSKMAG00000018155	-	100	74.324	ENSAOCG00000023599	-	100	73.311	Amphiprion_ocellaris
ENSKMAG00000018155	-	77	94.222	ENSATEG00000023356	-	87	94.222	Anabas_testudineus
ENSKMAG00000018155	-	97	66.443	ENSATEG00000022219	-	93	69.799	Anabas_testudineus
ENSKMAG00000018155	-	100	74.576	ENSACLG00000011720	-	100	73.559	Astatotilapia_calliptera
ENSKMAG00000018155	-	100	94.539	ENSACLG00000006949	-	100	93.857	Astatotilapia_calliptera
ENSKMAG00000018155	-	100	64.646	ENSAMXG00000032617	-	100	64.646	Astyanax_mexicanus
ENSKMAG00000018155	-	100	88.699	ENSAMXG00000019031	-	100	88.699	Astyanax_mexicanus
ENSKMAG00000018155	-	100	66.892	ENSCSEG00000014237	-	100	66.554	Cynoglossus_semilaevis
ENSKMAG00000018155	-	100	73.311	ENSCVAG00000013624	-	100	72.635	Cyprinodon_variegatus
ENSKMAG00000018155	-	100	93.174	ENSCVAG00000018104	-	100	94.198	Cyprinodon_variegatus
ENSKMAG00000018155	-	59	76.023	ENSDARG00000090292	ralyl	81	77.778	Danio_rerio
ENSKMAG00000018155	-	94	74.910	ENSELUG00000001702	-	97	76.703	Esox_lucius
ENSKMAG00000018155	-	57	78.788	ENSGMOG00000005914	-	100	78.788	Gadus_morhua
ENSKMAG00000018155	-	59	93.064	ENSGACG00000004991	-	91	95.181	Gasterosteus_aculeatus
ENSKMAG00000018155	-	100	94.539	ENSHBUG00000015412	-	100	93.857	Haplochromis_burtoni
ENSKMAG00000018155	-	100	74.324	ENSHBUG00000010040	-	100	73.311	Haplochromis_burtoni
ENSKMAG00000018155	-	100	88.356	ENSIPUG00000000507	ralyl	100	88.356	Ictalurus_punctatus
ENSKMAG00000018155	-	100	91.468	ENSLBEG00000011011	-	100	91.809	Labrus_bergylta
ENSKMAG00000018155	-	100	72.973	ENSLBEG00000012873	-	100	72.635	Labrus_bergylta
ENSKMAG00000018155	-	100	82.534	ENSLOCG00000012787	ralyl	99	82.192	Lepisosteus_oculatus
ENSKMAG00000018155	-	99	69.655	ENSMAMG00000001723	-	97	69.655	Mastacembelus_armatus
ENSKMAG00000018155	-	100	74.576	ENSMZEG00005024447	-	100	73.559	Maylandia_zebra
ENSKMAG00000018155	-	98	90.722	ENSMZEG00005018748	-	99	90.034	Maylandia_zebra
ENSKMAG00000018155	-	97	66.333	ENSMMOG00000020441	-	86	67.333	Mola_mola
ENSKMAG00000018155	-	100	93.493	ENSMALG00000012952	-	100	93.493	Monopterus_albus
ENSKMAG00000018155	-	100	74.662	ENSMALG00000019019	-	78	73.649	Monopterus_albus
ENSKMAG00000018155	-	97	67.698	ENSNBRG00000011206	-	97	67.698	Neolamprologus_brichardi
ENSKMAG00000018155	-	98	91.753	ENSNBRG00000011376	-	99	91.753	Neolamprologus_brichardi
ENSKMAG00000018155	-	100	95.890	ENSORLG00000012719	-	100	95.890	Oryzias_latipes
ENSKMAG00000018155	-	100	72.635	ENSORLG00000017934	-	100	70.608	Oryzias_latipes
ENSKMAG00000018155	-	100	70.270	ENSORLG00020000082	-	100	69.932	Oryzias_latipes_hni
ENSKMAG00000018155	-	100	95.890	ENSORLG00020004438	-	100	95.890	Oryzias_latipes_hni
ENSKMAG00000018155	-	100	72.635	ENSORLG00015004280	-	100	70.608	Oryzias_latipes_hsok
ENSKMAG00000018155	-	100	95.890	ENSORLG00015004727	-	100	95.890	Oryzias_latipes_hsok
ENSKMAG00000018155	-	100	96.233	ENSOMEG00000001170	-	100	96.233	Oryzias_melastigma
ENSKMAG00000018155	-	100	72.297	ENSOMEG00000011821	-	100	70.270	Oryzias_melastigma
ENSKMAG00000018155	-	100	79.252	ENSPKIG00000015926	-	100	78.498	Paramormyrops_kingsleyae
ENSKMAG00000018155	-	99	67.230	ENSPMGG00000009532	-	99	66.892	Periophthalmus_magnuspinnatus
ENSKMAG00000018155	-	80	81.013	ENSPMGG00000014481	-	98	80.169	Periophthalmus_magnuspinnatus
ENSKMAG00000018155	-	97	70.470	ENSPFOG00000006120	-	99	69.333	Poecilia_formosa
ENSKMAG00000018155	-	97	96.154	ENSPLAG00000011323	ralyl	100	96.154	Poecilia_latipinna
ENSKMAG00000018155	-	97	66.319	ENSPLAG00000009877	-	76	65.172	Poecilia_latipinna
ENSKMAG00000018155	-	97	66.319	ENSPMEG00000013624	-	80	65.172	Poecilia_mexicana
ENSKMAG00000018155	-	97	96.154	ENSPMEG00000023847	ralyl	100	96.154	Poecilia_mexicana
ENSKMAG00000018155	-	97	73.519	ENSPREG00000013805	-	100	67.722	Poecilia_reticulata
ENSKMAG00000018155	-	97	94.056	ENSPREG00000001956	ralyl	100	94.056	Poecilia_reticulata
ENSKMAG00000018155	-	98	90.722	ENSPNYG00000003548	-	99	90.034	Pundamilia_nyererei
ENSKMAG00000018155	-	97	67.698	ENSPNYG00000008772	-	97	67.698	Pundamilia_nyererei
ENSKMAG00000018155	-	100	88.699	ENSPNAG00000000498	-	88	88.356	Pygocentrus_nattereri
ENSKMAG00000018155	-	100	67.918	ENSPNAG00000026098	-	100	66.781	Pygocentrus_nattereri
ENSKMAG00000018155	-	100	89.116	ENSSFOG00015009401	-	100	87.755	Scleropages_formosus
ENSKMAG00000018155	-	100	67.808	ENSSFOG00015004575	-	96	74.558	Scleropages_formosus
ENSKMAG00000018155	-	97	70.526	ENSSMAG00000015907	-	93	70.175	Scophthalmus_maximus
ENSKMAG00000018155	-	100	94.521	ENSSMAG00000005608	-	100	94.521	Scophthalmus_maximus
ENSKMAG00000018155	-	100	74.324	ENSSDUG00000012473	-	100	73.311	Seriola_dumerili
ENSKMAG00000018155	-	100	95.890	ENSSDUG00000007587	-	100	95.890	Seriola_dumerili
ENSKMAG00000018155	-	100	73.986	ENSSLDG00000011534	-	100	72.973	Seriola_lalandi_dorsalis
ENSKMAG00000018155	-	100	95.222	ENSSLDG00000020603	-	100	95.222	Seriola_lalandi_dorsalis
ENSKMAG00000018155	-	97	63.958	ENSSPAG00000013858	-	96	62.329	Stegastes_partitus
ENSKMAG00000018155	-	82	75.732	ENSTRUG00000003829	-	95	71.025	Takifugu_rubripes
ENSKMAG00000018155	-	97	67.687	ENSTNIG00000005594	-	99	67.007	Tetraodon_nigroviridis
ENSKMAG00000018155	-	100	70.068	ENSXETG00000017729	ralyl	99	71.088	Xenopus_tropicalis
ENSKMAG00000018155	-	97	93.197	ENSXCOG00000015156	-	93	93.197	Xiphophorus_couchianus
ENSKMAG00000018155	-	100	74.324	ENSXMAG00000007614	-	100	73.311	Xiphophorus_maculatus
ENSKMAG00000018155	-	100	97.260	ENSXMAG00000008396	-	100	97.260	Xiphophorus_maculatus