EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018183 (Gene tree)
Gene ID: 108237331
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 1956 bases
Position: chrLWHD01000045.1:1002634-1004589
Accession: 108237331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024530	ResIII	PF04851.15	5.9e-05	1	1
ENSKMAP00000024530	DEAD	PF00270.29	1.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024838	-	1956	XM_017418676	ENSKMAP00000024530	565 (aa)	XP_017274165	UPI0007F8CA80

Gene Model

Click here to download ENSKMAG00000018183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018183	ddx28	64	34.426	ENSKMAG00000011340	ddx1	58	35.593
ENSKMAG00000018183	ddx28	64	30.526	ENSKMAG00000012060	ddx23	50	30.446
ENSKMAG00000018183	ddx28	67	30.280	ENSKMAG00000016167	ddx43	52	30.280
ENSKMAG00000018183	ddx28	61	30.601	ENSKMAG00000006165	ddx31	68	30.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018183	ddx28	93	46.429	ENSG00000182810	DDX28	97	46.241	Homo_sapiens
ENSKMAG00000018183	ddx28	100	76.991	ENSAPOG00000000991	ddx28	98	76.991	Acanthochromis_polyacanthus
ENSKMAG00000018183	ddx28	90	47.674	ENSAMEG00000019426	DDX28	95	47.674	Ailuropoda_melanoleuca
ENSKMAG00000018183	ddx28	100	74.028	ENSACIG00000021615	ddx28	100	74.028	Amphilophus_citrinellus
ENSKMAG00000018183	ddx28	100	77.876	ENSAOCG00000004610	ddx28	98	77.876	Amphiprion_ocellaris
ENSKMAG00000018183	ddx28	100	77.699	ENSAPEG00000002143	ddx28	98	77.699	Amphiprion_percula
ENSKMAG00000018183	ddx28	100	74.074	ENSATEG00000018691	ddx28	100	74.074	Anabas_testudineus
ENSKMAG00000018183	ddx28	90	46.004	ENSACAG00000009755	DDX28	94	46.004	Anolis_carolinensis
ENSKMAG00000018183	ddx28	100	72.035	ENSACLG00000012984	ddx28	100	72.035	Astatotilapia_calliptera
ENSKMAG00000018183	ddx28	91	62.689	ENSAMXG00000005878	ddx28	92	62.689	Astyanax_mexicanus
ENSKMAG00000018183	ddx28	90	47.656	ENSBTAG00000004290	DDX28	96	46.780	Bos_taurus
ENSKMAG00000018183	ddx28	88	47.619	ENSCAFG00000020327	DDX28	94	47.619	Canis_familiaris
ENSKMAG00000018183	ddx28	88	47.619	ENSCAFG00020019785	DDX28	94	47.619	Canis_lupus_dingo
ENSKMAG00000018183	ddx28	90	48.438	ENSCHIG00000009658	DDX28	93	48.438	Capra_hircus
ENSKMAG00000018183	ddx28	93	47.932	ENSCPOG00000013746	DDX28	97	47.932	Cavia_porcellus
ENSKMAG00000018183	ddx28	93	46.617	ENSCSAG00000018472	DDX28	96	46.617	Chlorocebus_sabaeus
ENSKMAG00000018183	ddx28	82	48.922	ENSCPBG00000012105	DDX28	81	50.985	Chrysemys_picta_bellii
ENSKMAG00000018183	ddx28	64	36.438	ENSCSAVG00000006341	-	94	36.438	Ciona_savignyi
ENSKMAG00000018183	ddx28	88	47.600	ENSCGRG00001024412	Ddx28	94	47.904	Cricetulus_griseus_chok1gshd
ENSKMAG00000018183	ddx28	99	65.371	ENSCSEG00000011651	ddx28	99	65.371	Cynoglossus_semilaevis
ENSKMAG00000018183	ddx28	99	76.460	ENSCVAG00000004044	ddx28	100	76.460	Cyprinodon_variegatus
ENSKMAG00000018183	ddx28	90	63.495	ENSDARG00000060411	ddx28	91	63.495	Danio_rerio
ENSKMAG00000018183	ddx28	64	54.768	ENSDNOG00000033593	DDX28	99	54.768	Dasypus_novemcinctus
ENSKMAG00000018183	ddx28	93	44.841	ENSDORG00000028868	Ddx28	97	45.506	Dipodomys_ordii
ENSKMAG00000018183	ddx28	83	36.117	FBgn0086130	Dbp21E2	88	35.903	Drosophila_melanogaster
ENSKMAG00000018183	ddx28	90	48.362	ENSETEG00000001062	-	94	48.362	Echinops_telfairi
ENSKMAG00000018183	ddx28	73	41.270	ENSEBUG00000004791	ddx28	80	40.865	Eptatretus_burgeri
ENSKMAG00000018183	ddx28	90	46.899	ENSEASG00005020387	DDX28	94	47.674	Equus_asinus_asinus
ENSKMAG00000018183	ddx28	90	47.093	ENSECAG00000006451	DDX28	94	47.868	Equus_caballus
ENSKMAG00000018183	ddx28	74	40.845	ENSEEUG00000005017	DDX28	97	42.056	Erinaceus_europaeus
ENSKMAG00000018183	ddx28	94	64.179	ENSELUG00000005302	ddx28	98	66.085	Esox_lucius
ENSKMAG00000018183	ddx28	90	47.868	ENSFCAG00000012858	DDX28	94	47.868	Felis_catus
ENSKMAG00000018183	ddx28	99	74.199	ENSFHEG00000012573	ddx28	99	74.199	Fundulus_heteroclitus
ENSKMAG00000018183	ddx28	91	68.138	ENSGMOG00000017045	ddx28	98	68.138	Gadus_morhua
ENSKMAG00000018183	ddx28	90	42.308	ENSGALG00000048700	DDX28	95	40.497	Gallus_gallus
ENSKMAG00000018183	ddx28	99	75.583	ENSGAFG00000009249	ddx28	99	75.583	Gambusia_affinis
ENSKMAG00000018183	ddx28	93	73.157	ENSGACG00000016367	ddx28	97	73.157	Gasterosteus_aculeatus
ENSKMAG00000018183	ddx28	78	45.898	ENSGAGG00000004565	DDX28	97	45.898	Gopherus_agassizii
ENSKMAG00000018183	ddx28	93	46.341	ENSGGOG00000001220	DDX28	97	46.341	Gorilla_gorilla
ENSKMAG00000018183	ddx28	100	75.398	ENSHBUG00000001016	ddx28	100	75.398	Haplochromis_burtoni
ENSKMAG00000018183	ddx28	97	66.667	ENSHCOG00000017590	ddx28	98	66.667	Hippocampus_comes
ENSKMAG00000018183	ddx28	98	59.253	ENSIPUG00000017350	Ddx28	98	59.253	Ictalurus_punctatus
ENSKMAG00000018183	ddx28	95	46.777	ENSSTOG00000002064	DDX28	99	46.777	Ictidomys_tridecemlineatus
ENSKMAG00000018183	ddx28	90	46.628	ENSJJAG00000012460	-	94	46.628	Jaculus_jaculus
ENSKMAG00000018183	ddx28	99	73.628	ENSLBEG00000006072	ddx28	99	73.628	Labrus_bergylta
ENSKMAG00000018183	ddx28	91	55.706	ENSLACG00000005578	DDX28	89	55.706	Latimeria_chalumnae
ENSKMAG00000018183	ddx28	98	57.117	ENSLOCG00000017604	ddx28	97	57.117	Lepisosteus_oculatus
ENSKMAG00000018183	ddx28	90	48.155	ENSLAFG00000031239	DDX28	97	47.269	Loxodonta_africana
ENSKMAG00000018183	ddx28	93	46.617	ENSMMUG00000010836	DDX28	96	46.617	Macaca_mulatta
ENSKMAG00000018183	ddx28	99	72.451	ENSMAMG00000020220	ddx28	98	72.451	Mastacembelus_armatus
ENSKMAG00000018183	ddx28	100	75.398	ENSMZEG00005009292	ddx28	100	75.398	Maylandia_zebra
ENSKMAG00000018183	ddx28	90	38.077	ENSMICG00000012346	-	94	38.077	Microcebus_murinus
ENSKMAG00000018183	ddx28	91	48.842	ENSMOCG00000009815	Ddx28	97	48.211	Microtus_ochrogaster
ENSKMAG00000018183	ddx28	99	71.480	ENSMMOG00000000270	ddx28	99	71.480	Mola_mola
ENSKMAG00000018183	ddx28	90	48.249	ENSMODG00000005303	DDX28	92	49.416	Monodelphis_domestica
ENSKMAG00000018183	ddx28	99	72.321	ENSMALG00000008864	ddx28	99	72.321	Monopterus_albus
ENSKMAG00000018183	ddx28	90	48.162	MGP_CAROLIEiJ_G0031510	Ddx28	94	48.162	Mus_caroli
ENSKMAG00000018183	ddx28	90	47.961	ENSMUSG00000045538	Ddx28	94	47.961	Mus_musculus
ENSKMAG00000018183	ddx28	90	47.961	MGP_PahariEiJ_G0023110	Ddx28	94	47.961	Mus_pahari
ENSKMAG00000018183	ddx28	90	47.961	MGP_SPRETEiJ_G0032628	Ddx28	94	47.961	Mus_spretus
ENSKMAG00000018183	ddx28	65	51.081	ENSMPUG00000006915	DDX28	91	51.081	Mustela_putorius_furo
ENSKMAG00000018183	ddx28	92	47.909	ENSMLUG00000005899	DDX28	96	47.909	Myotis_lucifugus
ENSKMAG00000018183	ddx28	90	48.654	ENSNGAG00000015762	Ddx28	94	48.846	Nannospalax_galili
ENSKMAG00000018183	ddx28	99	75.943	ENSNBRG00000001337	ddx28	100	75.943	Neolamprologus_brichardi
ENSKMAG00000018183	ddx28	99	75.979	ENSONIG00000020597	ddx28	99	75.979	Oreochromis_niloticus
ENSKMAG00000018183	ddx28	93	48.113	ENSOCUG00000023074	DDX28	97	48.113	Oryctolagus_cuniculus
ENSKMAG00000018183	ddx28	93	76.749	ENSORLG00000011968	ddx28	95	76.749	Oryzias_latipes
ENSKMAG00000018183	ddx28	93	76.749	ENSORLG00020001951	ddx28	96	76.749	Oryzias_latipes_hni
ENSKMAG00000018183	ddx28	93	77.127	ENSORLG00015023030	ddx28	96	77.127	Oryzias_latipes_hsok
ENSKMAG00000018183	ddx28	100	72.134	ENSOMEG00000012445	ddx28	100	72.134	Oryzias_melastigma
ENSKMAG00000018183	ddx28	90	47.701	ENSOGAG00000016895	DDX28	94	47.701	Otolemur_garnettii
ENSKMAG00000018183	ddx28	78	46.756	ENSOARG00000003313	DDX28	99	46.756	Ovis_aries
ENSKMAG00000018183	ddx28	93	44.278	ENSPPAG00000036971	DDX28	97	44.278	Pan_paniscus
ENSKMAG00000018183	ddx28	90	48.263	ENSPPRG00000018322	DDX28	94	48.263	Panthera_pardus
ENSKMAG00000018183	ddx28	90	46.525	ENSPTIG00000006444	DDX28	94	46.525	Panthera_tigris_altaica
ENSKMAG00000018183	ddx28	93	46.617	ENSPTRG00000008258	DDX28	97	46.617	Pan_troglodytes
ENSKMAG00000018183	ddx28	95	61.754	ENSPKIG00000021200	ddx28	97	61.754	Paramormyrops_kingsleyae
ENSKMAG00000018183	ddx28	97	65.392	ENSPMGG00000007908	ddx28	97	65.392	Periophthalmus_magnuspinnatus
ENSKMAG00000018183	ddx28	90	47.399	ENSPEMG00000003395	Ddx28	94	47.399	Peromyscus_maniculatus_bairdii
ENSKMAG00000018183	ddx28	100	76.637	ENSPFOG00000020838	DDX28	100	76.637	Poecilia_formosa
ENSKMAG00000018183	ddx28	100	76.637	ENSPFOG00000020952	ddx28	99	76.637	Poecilia_formosa
ENSKMAG00000018183	ddx28	100	76.106	ENSPLAG00000016292	ddx28	99	76.106	Poecilia_latipinna
ENSKMAG00000018183	ddx28	100	76.814	ENSPMEG00000011311	ddx28	98	76.814	Poecilia_mexicana
ENSKMAG00000018183	ddx28	100	76.814	ENSPREG00000002899	ddx28	99	76.814	Poecilia_reticulata
ENSKMAG00000018183	ddx28	93	46.241	ENSPPYG00000007481	DDX28	97	46.241	Pongo_abelii
ENSKMAG00000018183	ddx28	90	47.784	ENSPCOG00000024632	DDX28	94	47.784	Propithecus_coquereli
ENSKMAG00000018183	ddx28	100	75.221	ENSPNYG00000018804	ddx28	100	75.221	Pundamilia_nyererei
ENSKMAG00000018183	ddx28	90	63.353	ENSPNAG00000014597	ddx28	95	63.353	Pygocentrus_nattereri
ENSKMAG00000018183	ddx28	90	47.389	ENSRNOG00000019817	Ddx28	94	47.389	Rattus_norvegicus
ENSKMAG00000018183	ddx28	91	62.692	ENSSFOG00015010181	ddx28	96	62.030	Scleropages_formosus
ENSKMAG00000018183	ddx28	91	73.879	ENSSMAG00000006831	ddx28	96	73.879	Scophthalmus_maximus
ENSKMAG00000018183	ddx28	99	74.074	ENSSDUG00000003257	ddx28	99	73.944	Seriola_dumerili
ENSKMAG00000018183	ddx28	99	73.545	ENSSLDG00000004513	ddx28	99	73.545	Seriola_lalandi_dorsalis
ENSKMAG00000018183	ddx28	93	45.455	ENSSARG00000014169	DDX28	97	46.402	Sorex_araneus
ENSKMAG00000018183	ddx28	99	74.597	ENSSPAG00000000988	ddx28	99	74.597	Stegastes_partitus
ENSKMAG00000018183	ddx28	93	46.516	ENSSSCG00000026038	DDX28	97	46.704	Sus_scrofa
ENSKMAG00000018183	ddx28	92	72.115	ENSTRUG00000007815	ddx28	94	72.115	Takifugu_rubripes
ENSKMAG00000018183	ddx28	90	70.217	ENSTNIG00000011352	ddx28	100	70.217	Tetraodon_nigroviridis
ENSKMAG00000018183	ddx28	72	59.155	ENSTBEG00000017695	DDX28	75	59.155	Tupaia_belangeri
ENSKMAG00000018183	ddx28	90	47.776	ENSUAMG00000016116	DDX28	94	47.776	Ursus_americanus
ENSKMAG00000018183	ddx28	78	48.764	ENSUMAG00000019200	DDX28	89	49.888	Ursus_maritimus
ENSKMAG00000018183	ddx28	72	43.478	ENSVVUG00000012876	DDX28	81	43.478	Vulpes_vulpes
ENSKMAG00000018183	ddx28	89	46.507	ENSXETG00000005435	ddx28	97	46.507	Xenopus_tropicalis
ENSKMAG00000018183	ddx28	98	76.812	ENSXCOG00000012364	ddx28	97	76.812	Xiphophorus_couchianus
ENSKMAG00000018183	ddx28	92	78.887	ENSXMAG00000019603	ddx28	94	78.887	Xiphophorus_maculatus