EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000018220 (Gene tree)
Gene ID: 108250143
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7516 bases
Position: chrLWHD01000558.1:145439-152954
Accession: 108250143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024646	NOB1_Zn_bind	PF08772.11	5.5e-30	1	1
ENSKMAP00000024615	NOB1_Zn_bind	PF08772.11	6.6e-30	1	1
ENSKMAP00000024600	NOB1_Zn_bind	PF08772.11	6.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000024923	-	3160	-	ENSKMAP00000024615	455 (aa)	-	UPI0007F943ED
ENSKMAT00000024906	-	3232	XM_017439883	ENSKMAP00000024600	479 (aa)	XP_017295372	UPI0007F90C98
ENSKMAT00000024954	-	1251	XM_025002453	ENSKMAP00000024646	416 (aa)	XP_024858221	-

Gene Model

Click here to download ENSKMAG00000018220's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018220	nob1	99	65.144	ENSG00000141101	NOB1	95	76.190	Homo_sapiens
ENSKMAG00000018220	nob1	100	67.308	ENSAPOG00000008241	nob1	100	67.386	Acanthochromis_polyacanthus
ENSKMAG00000018220	nob1	99	65.783	ENSAMEG00000006706	NOB1	99	65.301	Ailuropoda_melanoleuca
ENSKMAG00000018220	nob1	99	71.789	ENSACIG00000001503	nob1	100	74.299	Amphilophus_citrinellus
ENSKMAG00000018220	nob1	100	78.606	ENSAOCG00000006533	nob1	100	78.606	Amphiprion_ocellaris
ENSKMAG00000018220	nob1	100	78.846	ENSAPEG00000000029	nob1	100	79.087	Amphiprion_percula
ENSKMAG00000018220	nob1	100	78.846	ENSAPEG00000000032	-	100	79.087	Amphiprion_percula
ENSKMAG00000018220	nob1	100	76.763	ENSATEG00000014585	nob1	100	76.763	Anabas_testudineus
ENSKMAG00000018220	nob1	99	60.970	ENSACAG00000003697	NOB1	87	62.500	Anolis_carolinensis
ENSKMAG00000018220	nob1	99	64.988	ENSANAG00000036611	NOB1	99	64.269	Aotus_nancymaae
ENSKMAG00000018220	nob1	100	76.141	ENSACLG00000024897	nob1	100	76.141	Astatotilapia_calliptera
ENSKMAG00000018220	nob1	94	62.441	ENSAMXG00000003642	nob1	100	63.934	Astyanax_mexicanus
ENSKMAG00000018220	nob1	99	63.294	ENSBTAG00000020633	NOB1	99	64.578	Bos_taurus
ENSKMAG00000018220	nob1	75	40.887	WBGene00021843	Y54E10BR.4	97	31.450	Caenorhabditis_elegans
ENSKMAG00000018220	nob1	99	64.976	ENSCJAG00000015230	NOB1	99	64.251	Callithrix_jacchus
ENSKMAG00000018220	nob1	99	63.279	ENSCAFG00000020251	NOB1	99	65.485	Canis_familiaris
ENSKMAG00000018220	nob1	99	63.279	ENSCAFG00020020297	NOB1	99	65.485	Canis_lupus_dingo
ENSKMAG00000018220	nob1	99	64.734	ENSCHIG00000027022	NOB1	99	65.144	Capra_hircus
ENSKMAG00000018220	nob1	99	65.072	ENSTSYG00000003084	NOB1	99	65.072	Carlito_syrichta
ENSKMAG00000018220	nob1	84	61.207	ENSCAPG00000015542	NOB1	100	61.782	Cavia_aperea
ENSKMAG00000018220	nob1	99	62.954	ENSCPOG00000022538	NOB1	99	63.438	Cavia_porcellus
ENSKMAG00000018220	nob1	99	63.915	ENSCCAG00000023773	NOB1	99	63.208	Cebus_capucinus
ENSKMAG00000018220	nob1	99	64.183	ENSCATG00000039487	NOB1	99	64.183	Cercocebus_atys
ENSKMAG00000018220	nob1	84	61.494	ENSCLAG00000005926	NOB1	100	61.782	Chinchilla_lanigera
ENSKMAG00000018220	nob1	99	64.508	ENSCSAG00000004158	NOB1	99	64.508	Chlorocebus_sabaeus
ENSKMAG00000018220	nob1	99	58.768	ENSCHOG00000011047	NOB1	99	59.036	Choloepus_hoffmanni
ENSKMAG00000018220	nob1	99	63.232	ENSCPBG00000027035	NOB1	92	62.763	Chrysemys_picta_bellii
ENSKMAG00000018220	nob1	99	44.340	ENSCING00000023441	-	99	44.686	Ciona_intestinalis
ENSKMAG00000018220	nob1	99	43.155	ENSCSAVG00000009081	-	99	43.405	Ciona_savignyi
ENSKMAG00000018220	nob1	99	64.578	ENSCGRG00001009255	Nob1	95	64.819	Cricetulus_griseus_chok1gshd
ENSKMAG00000018220	nob1	99	64.891	ENSCGRG00000010869	Nob1	99	65.133	Cricetulus_griseus_crigri
ENSKMAG00000018220	nob1	91	69.114	ENSCSEG00000019657	nob1	96	69.114	Cynoglossus_semilaevis
ENSKMAG00000018220	nob1	99	63.409	ENSDARG00000016080	nob1	100	62.500	Danio_rerio
ENSKMAG00000018220	nob1	99	65.133	ENSDNOG00000041643	NOB1	99	64.678	Dasypus_novemcinctus
ENSKMAG00000018220	nob1	99	65.133	ENSDORG00000000483	Nob1	99	64.891	Dipodomys_ordii
ENSKMAG00000018220	nob1	96	35.684	FBgn0030177	CG2972	98	35.729	Drosophila_melanogaster
ENSKMAG00000018220	nob1	60	52.016	ENSETEG00000000011	-	59	52.610	Echinops_telfairi
ENSKMAG00000018220	nob1	99	45.255	ENSEBUG00000004464	nob1	90	53.488	Eptatretus_burgeri
ENSKMAG00000018220	nob1	99	65.311	ENSEASG00005021356	NOB1	84	64.354	Equus_asinus_asinus
ENSKMAG00000018220	nob1	99	65.311	ENSECAG00000023748	NOB1	81	64.354	Equus_caballus
ENSKMAG00000018220	nob1	68	52.448	ENSEEUG00000014384	NOB1	66	50.883	Erinaceus_europaeus
ENSKMAG00000018220	nob1	100	66.517	ENSELUG00000016199	nob1	100	63.657	Esox_lucius
ENSKMAG00000018220	nob1	99	66.187	ENSFCAG00000002958	NOB1	99	65.385	Felis_catus
ENSKMAG00000018220	nob1	53	61.044	ENSFALG00000002747	NOB1	85	68.519	Ficedula_albicollis
ENSKMAG00000018220	nob1	99	61.631	ENSFDAG00000009239	NOB1	99	62.740	Fukomys_damarensis
ENSKMAG00000018220	nob1	51	79.574	ENSFHEG00000007657	nob1	52	83.902	Fundulus_heteroclitus
ENSKMAG00000018220	nob1	99	70.773	ENSGMOG00000010638	nob1	99	70.773	Gadus_morhua
ENSKMAG00000018220	nob1	99	58.118	ENSGALG00000000693	NOB1	99	58.118	Gallus_gallus
ENSKMAG00000018220	nob1	100	67.015	ENSGAFG00000006104	nob1	100	68.750	Gambusia_affinis
ENSKMAG00000018220	nob1	99	73.012	ENSGACG00000017552	nob1	99	73.494	Gasterosteus_aculeatus
ENSKMAG00000018220	nob1	99	64.151	ENSGAGG00000003902	NOB1	99	63.679	Gopherus_agassizii
ENSKMAG00000018220	nob1	99	65.385	ENSGGOG00000025456	NOB1	99	65.385	Gorilla_gorilla
ENSKMAG00000018220	nob1	100	78.177	ENSHBUG00000002580	nob1	100	77.990	Haplochromis_burtoni
ENSKMAG00000018220	nob1	99	63.876	ENSHGLG00000014260	NOB1	99	63.636	Heterocephalus_glaber_female
ENSKMAG00000018220	nob1	99	64.096	ENSHGLG00100013978	NOB1	99	64.096	Heterocephalus_glaber_male
ENSKMAG00000018220	nob1	99	64.133	ENSHCOG00000006699	nob1	100	64.133	Hippocampus_comes
ENSKMAG00000018220	nob1	100	63.580	ENSIPUG00000007579	nob1	100	63.580	Ictalurus_punctatus
ENSKMAG00000018220	nob1	99	64.649	ENSSTOG00000001204	NOB1	99	64.649	Ictidomys_tridecemlineatus
ENSKMAG00000018220	nob1	99	63.789	ENSJJAG00000015543	Nob1	99	64.593	Jaculus_jaculus
ENSKMAG00000018220	nob1	100	75.721	ENSLBEG00000026375	nob1	100	76.442	Labrus_bergylta
ENSKMAG00000018220	nob1	100	63.657	ENSLACG00000006973	NOB1	98	64.612	Latimeria_chalumnae
ENSKMAG00000018220	nob1	100	65.044	ENSLOCG00000001411	nob1	99	66.147	Lepisosteus_oculatus
ENSKMAG00000018220	nob1	99	65.796	ENSLAFG00000008978	NOB1	99	65.796	Loxodonta_africana
ENSKMAG00000018220	nob1	99	65.060	ENSMFAG00000030131	NOB1	99	64.578	Macaca_fascicularis
ENSKMAG00000018220	nob1	99	64.423	ENSMMUG00000006506	NOB1	99	65.144	Macaca_mulatta
ENSKMAG00000018220	nob1	99	64.508	ENSMNEG00000028829	NOB1	99	58.753	Macaca_nemestrina
ENSKMAG00000018220	nob1	99	65.625	ENSMLEG00000032913	NOB1	99	65.144	Mandrillus_leucophaeus
ENSKMAG00000018220	nob1	66	74.183	ENSMZEG00005003827	-	92	73.529	Maylandia_zebra
ENSKMAG00000018220	nob1	100	75.721	ENSMZEG00005028346	nob1	100	76.442	Maylandia_zebra
ENSKMAG00000018220	nob1	62	62.264	ENSMGAG00000008675	NOB1	98	63.774	Meleagris_gallopavo
ENSKMAG00000018220	nob1	99	62.470	ENSMAUG00000013554	Nob1	99	62.470	Mesocricetus_auratus
ENSKMAG00000018220	nob1	99	64.819	ENSMICG00000012123	NOB1	99	64.096	Microcebus_murinus
ENSKMAG00000018220	nob1	99	65.375	ENSMOCG00000010370	Nob1	99	65.617	Microtus_ochrogaster
ENSKMAG00000018220	nob1	100	75.000	ENSMMOG00000002120	nob1	100	75.000	Mola_mola
ENSKMAG00000018220	nob1	99	60.920	ENSMODG00000002677	NOB1	99	62.850	Monodelphis_domestica
ENSKMAG00000018220	nob1	99	75.663	ENSMALG00000014580	nob1	100	75.904	Monopterus_albus
ENSKMAG00000018220	nob1	99	64.663	MGP_CAROLIEiJ_G0031536	Nob1	98	64.663	Mus_caroli
ENSKMAG00000018220	nob1	99	64.904	ENSMUSG00000003848	Nob1	99	64.183	Mus_musculus
ENSKMAG00000018220	nob1	99	64.663	MGP_PahariEiJ_G0023136	Nob1	99	64.663	Mus_pahari
ENSKMAG00000018220	nob1	99	64.904	MGP_SPRETEiJ_G0032654	Nob1	98	64.904	Mus_spretus
ENSKMAG00000018220	nob1	99	64.539	ENSMPUG00000007483	NOB1	91	65.485	Mustela_putorius_furo
ENSKMAG00000018220	nob1	99	66.586	ENSMLUG00000006667	NOB1	99	66.265	Myotis_lucifugus
ENSKMAG00000018220	nob1	99	64.423	ENSNGAG00000008627	Nob1	99	64.423	Nannospalax_galili
ENSKMAG00000018220	nob1	99	65.468	ENSNLEG00000005572	NOB1	99	65.468	Nomascus_leucogenys
ENSKMAG00000018220	nob1	78	62.385	ENSOPRG00000006721	NOB1	99	63.609	Ochotona_princeps
ENSKMAG00000018220	nob1	99	63.855	ENSODEG00000014376	NOB1	99	63.855	Octodon_degus
ENSKMAG00000018220	nob1	99	74.661	ENSONIG00000003319	nob1	99	74.150	Oreochromis_niloticus
ENSKMAG00000018220	nob1	84	64.387	ENSOCUG00000004400	NOB1	100	65.527	Oryctolagus_cuniculus
ENSKMAG00000018220	nob1	100	75.000	ENSORLG00000018862	nob1	100	75.000	Oryzias_latipes
ENSKMAG00000018220	nob1	100	75.481	ENSORLG00020014687	nob1	100	75.481	Oryzias_latipes_hni
ENSKMAG00000018220	nob1	100	74.279	ENSORLG00015012156	nob1	100	74.279	Oryzias_latipes_hsok
ENSKMAG00000018220	nob1	100	71.992	ENSOMEG00000022722	nob1	100	72.614	Oryzias_melastigma
ENSKMAG00000018220	nob1	99	60.482	ENSOGAG00000004590	NOB1	99	60.482	Otolemur_garnettii
ENSKMAG00000018220	nob1	99	63.855	ENSOARG00000003606	NOB1	99	64.337	Ovis_aries
ENSKMAG00000018220	nob1	99	65.144	ENSPPAG00000040257	NOB1	99	65.144	Pan_paniscus
ENSKMAG00000018220	nob1	97	58.374	ENSPPAG00000003317	-	100	57.882	Pan_paniscus
ENSKMAG00000018220	nob1	99	65.144	ENSPPRG00000016949	NOB1	99	65.865	Panthera_pardus
ENSKMAG00000018220	nob1	99	65.144	ENSPTIG00000011234	NOB1	99	65.485	Panthera_tigris_altaica
ENSKMAG00000018220	nob1	99	65.144	ENSPTRG00000008285	NOB1	99	65.144	Pan_troglodytes
ENSKMAG00000018220	nob1	99	65.865	ENSPANG00000015858	NOB1	99	64.423	Papio_anubis
ENSKMAG00000018220	nob1	100	65.747	ENSPKIG00000020293	nob1	100	69.976	Paramormyrops_kingsleyae
ENSKMAG00000018220	nob1	99	62.322	ENSPSIG00000012477	NOB1	98	63.483	Pelodiscus_sinensis
ENSKMAG00000018220	nob1	99	68.193	ENSPMGG00000023476	nob1	100	69.880	Periophthalmus_magnuspinnatus
ENSKMAG00000018220	nob1	99	65.534	ENSPEMG00000010995	Nob1	99	65.534	Peromyscus_maniculatus_bairdii
ENSKMAG00000018220	nob1	84	70.300	ENSPFOG00000000027	nob1	100	70.219	Poecilia_formosa
ENSKMAG00000018220	nob1	65	73.801	ENSPLAG00000011546	nob1	96	73.801	Poecilia_latipinna
ENSKMAG00000018220	nob1	100	70.433	ENSPMEG00000023435	nob1	100	69.504	Poecilia_mexicana
ENSKMAG00000018220	nob1	99	68.828	ENSPREG00000007675	nob1	100	68.685	Poecilia_reticulata
ENSKMAG00000018220	nob1	99	65.542	ENSPPYG00000007509	NOB1	99	65.301	Pongo_abelii
ENSKMAG00000018220	nob1	99	61.575	ENSPCAG00000001527	NOB1	99	61.337	Procavia_capensis
ENSKMAG00000018220	nob1	99	64.407	ENSPCOG00000025515	NOB1	99	64.891	Propithecus_coquereli
ENSKMAG00000018220	nob1	78	45.566	ENSPVAG00000013330	NOB1	78	44.648	Pteropus_vampyrus
ENSKMAG00000018220	nob1	100	75.826	ENSPNYG00000018449	nob1	100	75.806	Pundamilia_nyererei
ENSKMAG00000018220	nob1	100	61.745	ENSPNAG00000004244	nob1	99	63.182	Pygocentrus_nattereri
ENSKMAG00000018220	nob1	99	64.891	ENSRNOG00000021890	Nob1	99	64.891	Rattus_norvegicus
ENSKMAG00000018220	nob1	99	64.663	ENSRBIG00000019599	NOB1	99	64.663	Rhinopithecus_bieti
ENSKMAG00000018220	nob1	99	64.663	ENSRROG00000033419	NOB1	99	64.663	Rhinopithecus_roxellana
ENSKMAG00000018220	nob1	57	35.484	YOR056C	NOB1	56	36.036	Saccharomyces_cerevisiae
ENSKMAG00000018220	nob1	84	62.185	ENSSBOG00000029042	NOB1	89	61.345	Saimiri_boliviensis_boliviensis
ENSKMAG00000018220	nob1	99	65.550	ENSSHAG00000015387	NOB1	99	65.550	Sarcophilus_harrisii
ENSKMAG00000018220	nob1	100	64.932	ENSSFOG00015008503	nob1	100	67.202	Scleropages_formosus
ENSKMAG00000018220	nob1	100	74.651	ENSSMAG00000003064	nob1	100	77.512	Scophthalmus_maximus
ENSKMAG00000018220	nob1	100	77.273	ENSSDUG00000007307	nob1	100	77.218	Seriola_dumerili
ENSKMAG00000018220	nob1	67	86.550	ENSSLDG00000011459	-	95	86.550	Seriola_lalandi_dorsalis
ENSKMAG00000018220	nob1	88	61.413	ENSSPUG00000005621	NOB1	99	63.037	Sphenodon_punctatus
ENSKMAG00000018220	nob1	100	77.404	ENSSPAG00000022362	nob1	100	77.644	Stegastes_partitus
ENSKMAG00000018220	nob1	99	66.024	ENSSSCG00000002753	NOB1	99	66.024	Sus_scrofa
ENSKMAG00000018220	nob1	99	72.018	ENSTRUG00000023145	nob1	100	71.918	Takifugu_rubripes
ENSKMAG00000018220	nob1	99	72.018	ENSTRUG00000004780	nob1	100	71.918	Takifugu_rubripes
ENSKMAG00000018220	nob1	99	74.279	ENSTNIG00000002552	nob1	100	74.279	Tetraodon_nigroviridis
ENSKMAG00000018220	nob1	60	55.600	ENSTBEG00000000690	NOB1	52	56.000	Tupaia_belangeri
ENSKMAG00000018220	nob1	61	65.882	ENSUAMG00000028135	NOB1	99	66.275	Ursus_americanus
ENSKMAG00000018220	nob1	99	64.066	ENSUMAG00000018658	NOB1	95	64.303	Ursus_maritimus
ENSKMAG00000018220	nob1	99	63.279	ENSVVUG00000017271	NOB1	99	65.485	Vulpes_vulpes
ENSKMAG00000018220	nob1	100	62.759	ENSXETG00000017874	nob1	99	62.069	Xenopus_tropicalis
ENSKMAG00000018220	nob1	84	70.255	ENSXCOG00000009734	nob1	100	69.972	Xiphophorus_couchianus
ENSKMAG00000018220	nob1	100	70.142	ENSXMAG00000017371	nob1	100	70.096	Xiphophorus_maculatus