EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018315 (Gene tree)
Gene ID: 108246146
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8050 bases
Position: chrLWHD01000199.1:197646-205695
Accession: 108246146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024701	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025009	-	2516	XM_017433544	ENSKMAP00000024701	180 (aa)	XP_017289033	UPI0007F8A67D

Gene Model

Click here to download ENSKMAG00000018315's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018315	-	92	33.133	ENSKMAG00000002898	arl8a	89	33.133
ENSKMAG00000018315	-	96	32.759	ENSKMAG00000006196	arl8ba	94	32.759
ENSKMAG00000018315	-	100	92.818	ENSKMAG00000019525	arf3b	100	92.818
ENSKMAG00000018315	-	90	42.945	ENSKMAG00000001256	arl11	78	42.945
ENSKMAG00000018315	-	98	45.763	ENSKMAG00000007118	arl2	96	45.763
ENSKMAG00000018315	-	96	46.629	ENSKMAG00000020210	arl4aa	91	46.629
ENSKMAG00000018315	-	100	92.818	ENSKMAG00000007316	arf2b	100	92.818
ENSKMAG00000018315	-	100	41.304	ENSKMAG00000000362	ARL6	99	41.304
ENSKMAG00000018315	-	59	35.514	ENSKMAG00000014875	-	82	35.514
ENSKMAG00000018315	-	83	85.235	ENSKMAG00000008864	-	88	85.235
ENSKMAG00000018315	-	97	51.724	ENSKMAG00000005826	ARL5A	97	51.724
ENSKMAG00000018315	-	97	44.633	ENSKMAG00000004435	arl3l2	95	44.633
ENSKMAG00000018315	-	90	57.407	ENSKMAG00000005931	arl1	88	57.407
ENSKMAG00000018315	-	86	48.734	ENSKMAG00000020389	-	76	48.734
ENSKMAG00000018315	-	89	43.373	ENSKMAG00000010409	arl14	83	43.373
ENSKMAG00000018315	-	91	45.732	ENSKMAG00000017791	-	90	45.732
ENSKMAG00000018315	-	96	32.759	ENSKMAG00000020329	arl8bb	94	32.759
ENSKMAG00000018315	-	94	36.264	ENSKMAG00000016837	arfrp1	89	36.264
ENSKMAG00000018315	-	97	81.609	ENSKMAG00000012816	-	97	81.609
ENSKMAG00000018315	-	83	30.625	ENSKMAG00000020736	srprb	60	30.625
ENSKMAG00000018315	-	96	47.191	ENSKMAG00000011334	arl4cb	91	47.191
ENSKMAG00000018315	-	96	51.744	ENSKMAG00000013576	arl8	96	51.744
ENSKMAG00000018315	-	92	46.386	ENSKMAG00000009772	arl3	91	46.386
ENSKMAG00000018315	-	100	92.818	ENSKMAG00000021494	-	100	92.818
ENSKMAG00000018315	-	99	92.179	ENSKMAG00000004334	-	99	92.179
ENSKMAG00000018315	-	92	42.353	ENSKMAG00000000815	-	88	42.353
ENSKMAG00000018315	-	98	47.727	ENSKMAG00000011323	arl5c	98	47.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018315	-	100	94.444	ENSACIG00000012192	-	100	94.444	Amphilophus_citrinellus
ENSKMAG00000018315	-	84	96.026	ENSAOCG00000001275	-	88	96.026	Amphiprion_ocellaris
ENSKMAG00000018315	-	100	95.000	ENSAPEG00000016909	-	100	95.000	Amphiprion_percula
ENSKMAG00000018315	-	100	96.111	ENSATEG00000003174	-	100	96.111	Anabas_testudineus
ENSKMAG00000018315	-	100	93.333	ENSACLG00000004123	-	100	93.333	Astatotilapia_calliptera
ENSKMAG00000018315	-	100	93.370	ENSAMXG00000019845	arf1	100	93.370	Astyanax_mexicanus
ENSKMAG00000018315	-	100	95.000	ENSCVAG00000013374	-	100	95.000	Cyprinodon_variegatus
ENSKMAG00000018315	-	100	93.370	ENSDARG00000009484	arf1	100	93.370	Danio_rerio
ENSKMAG00000018315	-	100	93.923	ENSELUG00000022533	arf1	79	93.923	Esox_lucius
ENSKMAG00000018315	-	100	94.444	ENSFHEG00000005859	-	100	94.444	Fundulus_heteroclitus
ENSKMAG00000018315	-	96	89.595	ENSGMOG00000000429	arf1	95	89.595	Gadus_morhua
ENSKMAG00000018315	-	100	95.000	ENSGAFG00000018151	-	100	95.000	Gambusia_affinis
ENSKMAG00000018315	-	100	83.889	ENSGACG00000014195	-	97	83.889	Gasterosteus_aculeatus
ENSKMAG00000018315	-	100	93.333	ENSHBUG00000002636	-	100	93.333	Haplochromis_burtoni
ENSKMAG00000018315	-	100	92.818	ENSIPUG00000006311	arf1	100	92.818	Ictalurus_punctatus
ENSKMAG00000018315	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSKMAG00000018315	-	99	89.944	ENSLBEG00000001998	arf1	99	89.944	Labrus_bergylta
ENSKMAG00000018315	-	100	96.111	ENSMAMG00000001553	-	100	96.111	Mastacembelus_armatus
ENSKMAG00000018315	-	100	93.333	ENSMZEG00005022594	-	100	93.333	Maylandia_zebra
ENSKMAG00000018315	-	100	95.556	ENSMALG00000004269	-	100	95.556	Monopterus_albus
ENSKMAG00000018315	-	100	93.333	ENSNBRG00000016455	-	100	93.333	Neolamprologus_brichardi
ENSKMAG00000018315	-	100	93.333	ENSONIG00000001286	-	100	93.333	Oreochromis_niloticus
ENSKMAG00000018315	-	100	96.111	ENSORLG00000023270	-	100	96.111	Oryzias_latipes
ENSKMAG00000018315	-	100	95.556	ENSORLG00020006712	-	100	95.556	Oryzias_latipes_hni
ENSKMAG00000018315	-	100	96.111	ENSORLG00015019836	-	100	96.111	Oryzias_latipes_hsok
ENSKMAG00000018315	-	100	96.111	ENSOMEG00000023784	-	100	96.111	Oryzias_melastigma
ENSKMAG00000018315	-	100	88.950	ENSPMGG00000014174	arf1	100	88.950	Periophthalmus_magnuspinnatus
ENSKMAG00000018315	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSKMAG00000018315	-	100	95.000	ENSPFOG00000014787	-	100	95.000	Poecilia_formosa
ENSKMAG00000018315	-	100	95.000	ENSPLAG00000001041	-	100	95.000	Poecilia_latipinna
ENSKMAG00000018315	-	100	95.000	ENSPMEG00000024077	-	100	95.000	Poecilia_mexicana
ENSKMAG00000018315	-	100	95.000	ENSPREG00000009009	-	100	95.000	Poecilia_reticulata
ENSKMAG00000018315	-	100	93.333	ENSPNYG00000009472	-	100	93.333	Pundamilia_nyererei
ENSKMAG00000018315	-	94	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSKMAG00000018315	-	99	78.889	YDL192W	-	99	78.889	Saccharomyces_cerevisiae
ENSKMAG00000018315	-	99	78.212	YDL137W	-	99	78.212	Saccharomyces_cerevisiae
ENSKMAG00000018315	-	100	90.000	ENSSMAG00000006125	-	100	90.000	Scophthalmus_maximus
ENSKMAG00000018315	-	100	95.000	ENSSDUG00000017356	-	100	95.000	Seriola_dumerili
ENSKMAG00000018315	-	100	95.000	ENSSLDG00000008504	-	100	95.000	Seriola_lalandi_dorsalis
ENSKMAG00000018315	-	100	96.111	ENSSPAG00000011431	-	100	96.111	Stegastes_partitus
ENSKMAG00000018315	-	100	94.444	ENSTRUG00000019870	-	100	94.444	Takifugu_rubripes
ENSKMAG00000018315	-	100	92.778	ENSTNIG00000011685	-	100	92.778	Tetraodon_nigroviridis
ENSKMAG00000018315	-	100	95.000	ENSXCOG00000016687	-	98	95.000	Xiphophorus_couchianus
ENSKMAG00000018315	-	100	95.000	ENSXMAG00000009193	-	100	95.000	Xiphophorus_maculatus