EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000018364 (Gene tree)
Gene ID: 108246137
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 23767 bases
Position: chrLWHD01000199.1:230970-254736
Accession: 108246137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024790	zf-C2H2_jaz	PF12171.8	4.7e-06	1	1
ENSKMAP00000024771	zf-C2H2_jaz	PF12171.8	4.9e-06	1	1
ENSKMAP00000024771	G-patch	PF01585.23	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025100	-	4375	XM_017433515	ENSKMAP00000024790	1429 (aa)	XP_017289004	UPI0007F8C6C5
ENSKMAT00000025081	-	4782	XM_017433514	ENSKMAP00000024771	1492 (aa)	XP_017289003	UPI0007F8BFD8

Gene Model

Click here to download ENSKMAG00000018364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018364	gpatch8	100	85.438	ENSAPOG00000023938	gpatch8	100	85.705	Acanthochromis_polyacanthus
ENSKMAG00000018364	gpatch8	100	82.278	ENSACIG00000012241	gpatch8	100	82.478	Amphilophus_citrinellus
ENSKMAG00000018364	gpatch8	100	85.504	ENSAOCG00000018102	gpatch8	100	85.705	Amphiprion_ocellaris
ENSKMAG00000018364	gpatch8	100	85.504	ENSAPEG00000016776	gpatch8	100	85.705	Amphiprion_percula
ENSKMAG00000018364	gpatch8	61	78.057	ENSATEG00000003247	gpatch8	100	80.240	Anabas_testudineus
ENSKMAG00000018364	gpatch8	100	82.218	ENSACLG00000004165	gpatch8	100	82.899	Astatotilapia_calliptera
ENSKMAG00000018364	gpatch8	100	65.237	ENSELUG00000019920	gpatch8	57	63.254	Esox_lucius
ENSKMAG00000018364	gpatch8	86	49.362	ENSFALG00000009554	GPATCH8	75	54.673	Ficedula_albicollis
ENSKMAG00000018364	gpatch8	55	81.378	ENSGAFG00000018138	gpatch8	100	83.925	Gambusia_affinis
ENSKMAG00000018364	gpatch8	100	81.533	ENSHBUG00000002669	gpatch8	100	83.067	Haplochromis_burtoni
ENSKMAG00000018364	gpatch8	72	58.247	ENSHGLG00100010738	GPATCH8	93	58.103	Heterocephalus_glaber_male
ENSKMAG00000018364	gpatch8	61	68.988	ENSHCOG00000017518	gpatch8	56	66.269	Hippocampus_comes
ENSKMAG00000018364	gpatch8	100	80.360	ENSLBEG00000023352	gpatch8	100	79.569	Labrus_bergylta
ENSKMAG00000018364	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	57	81.034	Lepisosteus_oculatus
ENSKMAG00000018364	gpatch8	99	82.875	ENSMAMG00000001618	gpatch8	100	82.593	Mastacembelus_armatus
ENSKMAG00000018364	gpatch8	100	82.148	ENSMZEG00005022584	gpatch8	100	82.832	Maylandia_zebra
ENSKMAG00000018364	gpatch8	56	75.805	ENSMMOG00000020472	gpatch8	55	76.675	Mola_mola
ENSKMAG00000018364	gpatch8	100	79.573	ENSMALG00000004204	gpatch8	100	79.840	Monopterus_albus
ENSKMAG00000018364	gpatch8	53	63.006	ENSMLUG00000013840	GPATCH8	53	63.905	Myotis_lucifugus
ENSKMAG00000018364	gpatch8	100	82.067	ENSNBRG00000016402	gpatch8	100	83.267	Neolamprologus_brichardi
ENSKMAG00000018364	gpatch8	100	78.947	ENSONIG00000001292	gpatch8	100	81.463	Oreochromis_niloticus
ENSKMAG00000018364	gpatch8	56	76.758	ENSORLG00000028497	gpatch8	56	75.986	Oryzias_latipes
ENSKMAG00000018364	gpatch8	61	77.693	ENSORLG00020006656	gpatch8	56	75.508	Oryzias_latipes_hni
ENSKMAG00000018364	gpatch8	56	76.639	ENSORLG00015019797	gpatch8	56	76.105	Oryzias_latipes_hsok
ENSKMAG00000018364	gpatch8	100	74.550	ENSPMGG00000000730	gpatch8	99	75.532	Periophthalmus_magnuspinnatus
ENSKMAG00000018364	gpatch8	55	80.820	ENSPFOG00000014833	gpatch8	100	84.013	Poecilia_formosa
ENSKMAG00000018364	gpatch8	55	80.579	ENSPLAG00000001035	gpatch8	100	83.813	Poecilia_latipinna
ENSKMAG00000018364	gpatch8	55	80.820	ENSPMEG00000024032	gpatch8	100	83.589	Poecilia_mexicana
ENSKMAG00000018364	gpatch8	55	80.700	ENSPREG00000008911	gpatch8	100	83.880	Poecilia_reticulata
ENSKMAG00000018364	gpatch8	100	82.287	ENSPNYG00000009426	gpatch8	100	82.966	Pundamilia_nyererei
ENSKMAG00000018364	gpatch8	59	62.080	ENSPNAG00000016200	gpatch8	58	60.508	Pygocentrus_nattereri
ENSKMAG00000018364	gpatch8	56	56.023	ENSSFOG00015004299	GPATCH8	51	56.195	Scleropages_formosus
ENSKMAG00000018364	gpatch8	100	82.977	ENSSDUG00000018065	gpatch8	100	83.253	Seriola_dumerili
ENSKMAG00000018364	gpatch8	100	84.120	ENSSLDG00000009225	gpatch8	100	84.518	Seriola_lalandi_dorsalis
ENSKMAG00000018364	gpatch8	100	85.438	ENSSPAG00000011368	gpatch8	100	85.638	Stegastes_partitus
ENSKMAG00000018364	gpatch8	61	71.288	ENSTRUG00000020474	gpatch8	53	81.084	Takifugu_rubripes
ENSKMAG00000018364	gpatch8	60	60.068	ENSTBEG00000009486	GPATCH8	59	59.727	Tupaia_belangeri
ENSKMAG00000018364	gpatch8	55	79.592	ENSXCOG00000016680	gpatch8	100	83.200	Xiphophorus_couchianus
ENSKMAG00000018364	gpatch8	55	79.783	ENSXMAG00000009217	gpatch8	100	83.311	Xiphophorus_maculatus