EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018468 (Gene tree)
Gene ID: 108238080
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 42222 bases
Position: chrLWHD01000051.1:1436668-1478889
Accession: 108238080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000024944	La	PF05383.17	4.5e-21	1	1
ENSKMAP00000025005	La	PF05383.17	4.5e-21	1	1
ENSKMAP00000024914	La	PF05383.17	4.6e-21	1	1
ENSKMAP00000024990	La	PF05383.17	5.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025258	-	3198	XM_017419922	ENSKMAP00000024944	1065 (aa)	XP_017275411	UPI0007F89611
ENSKMAT00000025306	-	3075	-	ENSKMAP00000024990	1024 (aa)	-	-
ENSKMAT00000025321	-	3330	XM_017419923	ENSKMAP00000025005	976 (aa)	XP_017275412	UPI0007F8D224
ENSKMAT00000025225	-	3270	XM_017419919	ENSKMAP00000024914	1089 (aa)	XP_017275408	UPI0007F87F7E

Gene Model

Click here to download ENSKMAG00000018468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018468	larp1	98	53.185	ENSKMAG00000011589	larp1b	94	52.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018468	larp1	95	67.883	ENSG00000155506	LARP1	90	82.424	Homo_sapiens
ENSKMAG00000018468	larp1	87	95.853	ENSAPOG00000020685	larp1	98	97.642	Acanthochromis_polyacanthus
ENSKMAG00000018468	larp1	96	68.394	ENSAMEG00000016673	LARP1	96	69.013	Ailuropoda_melanoleuca
ENSKMAG00000018468	larp1	100	77.635	ENSACIG00000012994	larp1	100	77.615	Amphilophus_citrinellus
ENSKMAG00000018468	larp1	87	90.610	ENSAOCG00000007792	larp1	100	90.023	Amphiprion_ocellaris
ENSKMAG00000018468	larp1	99	91.291	ENSAPEG00000022246	larp1	100	88.868	Amphiprion_percula
ENSKMAG00000018468	larp1	96	89.681	ENSATEG00000013523	larp1	100	86.368	Anabas_testudineus
ENSKMAG00000018468	larp1	92	70.690	ENSAPLG00000007559	LARP1	99	72.538	Anas_platyrhynchos
ENSKMAG00000018468	larp1	96	69.547	ENSACAG00000004071	LARP1	94	73.495	Anolis_carolinensis
ENSKMAG00000018468	larp1	95	67.668	ENSANAG00000029949	LARP1	97	64.499	Aotus_nancymaae
ENSKMAG00000018468	larp1	99	89.409	ENSACLG00000015256	larp1	99	89.308	Astatotilapia_calliptera
ENSKMAG00000018468	larp1	97	79.853	ENSAMXG00000000859	larp1	98	77.810	Astyanax_mexicanus
ENSKMAG00000018468	larp1	95	69.182	ENSBTAG00000008443	LARP1	97	65.041	Bos_taurus
ENSKMAG00000018468	larp1	95	68.092	ENSCJAG00000004454	LARP1	97	64.885	Callithrix_jacchus
ENSKMAG00000018468	larp1	96	68.705	ENSCAFG00000017639	LARP1	97	69.533	Canis_familiaris
ENSKMAG00000018468	larp1	87	71.543	ENSCAFG00020023860	LARP1	95	71.379	Canis_lupus_dingo
ENSKMAG00000018468	larp1	95	68.973	ENSCHIG00000014414	LARP1	97	64.052	Capra_hircus
ENSKMAG00000018468	larp1	99	65.567	ENSTSYG00000013732	LARP1	96	66.951	Carlito_syrichta
ENSKMAG00000018468	larp1	84	69.575	ENSCAPG00000013865	LARP1	85	68.986	Cavia_aperea
ENSKMAG00000018468	larp1	95	68.783	ENSCPOG00000003377	LARP1	96	69.329	Cavia_porcellus
ENSKMAG00000018468	larp1	95	67.987	ENSCCAG00000025201	LARP1	97	64.765	Cebus_capucinus
ENSKMAG00000018468	larp1	95	67.996	ENSCATG00000030675	LARP1	97	62.512	Cercocebus_atys
ENSKMAG00000018468	larp1	98	67.306	ENSCLAG00000012755	LARP1	96	67.553	Chinchilla_lanigera
ENSKMAG00000018468	larp1	86	68.129	ENSCSAG00000010800	LARP1	95	68.245	Chlorocebus_sabaeus
ENSKMAG00000018468	larp1	89	66.471	ENSCHOG00000012716	LARP1	88	66.372	Choloepus_hoffmanni
ENSKMAG00000018468	larp1	95	72.766	ENSCPBG00000002173	LARP1	96	69.761	Chrysemys_picta_bellii
ENSKMAG00000018468	larp1	95	68.625	ENSCANG00000037418	LARP1	93	66.497	Colobus_angolensis_palliatus
ENSKMAG00000018468	larp1	98	67.480	ENSCGRG00001016913	Larp1	97	65.913	Cricetulus_griseus_chok1gshd
ENSKMAG00000018468	larp1	95	65.328	ENSCGRG00000009916	Larp1	99	66.093	Cricetulus_griseus_crigri
ENSKMAG00000018468	larp1	98	90.282	ENSCSEG00000016431	larp1	100	86.047	Cynoglossus_semilaevis
ENSKMAG00000018468	larp1	98	90.407	ENSCVAG00000022687	larp1	100	87.708	Cyprinodon_variegatus
ENSKMAG00000018468	larp1	97	73.305	ENSDARG00000101722	larp1	97	71.053	Danio_rerio
ENSKMAG00000018468	larp1	96	68.215	ENSDNOG00000012073	LARP1	97	64.917	Dasypus_novemcinctus
ENSKMAG00000018468	larp1	99	63.682	ENSDORG00000002897	Larp1	95	66.489	Dipodomys_ordii
ENSKMAG00000018468	larp1	91	69.499	ENSETEG00000020251	LARP1	100	69.281	Echinops_telfairi
ENSKMAG00000018468	larp1	95	68.607	ENSEASG00005001070	LARP1	94	76.685	Equus_asinus_asinus
ENSKMAG00000018468	larp1	95	68.262	ENSECAG00000017002	LARP1	78	65.052	Equus_caballus
ENSKMAG00000018468	larp1	93	65.668	ENSEEUG00000001065	LARP1	96	66.667	Erinaceus_europaeus
ENSKMAG00000018468	larp1	98	81.250	ENSELUG00000019403	larp1	99	78.413	Esox_lucius
ENSKMAG00000018468	larp1	95	68.744	ENSFCAG00000000592	LARP1	97	64.986	Felis_catus
ENSKMAG00000018468	larp1	85	73.540	ENSFALG00000008335	LARP1	99	71.093	Ficedula_albicollis
ENSKMAG00000018468	larp1	95	69.005	ENSFDAG00000021125	LARP1	96	69.403	Fukomys_damarensis
ENSKMAG00000018468	larp1	63	79.386	ENSFHEG00000020307	larp1	97	79.386	Fundulus_heteroclitus
ENSKMAG00000018468	larp1	96	70.907	ENSGALG00000040109	LARP1	97	69.677	Gallus_gallus
ENSKMAG00000018468	larp1	95	71.954	ENSGAGG00000025113	LARP1	97	73.341	Gopherus_agassizii
ENSKMAG00000018468	larp1	95	67.883	ENSGGOG00000006048	LARP1	90	68.249	Gorilla_gorilla
ENSKMAG00000018468	larp1	99	89.867	ENSHBUG00000020762	larp1	99	89.765	Haplochromis_burtoni
ENSKMAG00000018468	larp1	93	68.438	ENSHGLG00000006267	LARP1	97	64.411	Heterocephalus_glaber_female
ENSKMAG00000018468	larp1	95	58.570	ENSHGLG00100003395	-	88	58.653	Heterocephalus_glaber_male
ENSKMAG00000018468	larp1	95	68.158	ENSHGLG00100014230	-	96	69.223	Heterocephalus_glaber_male
ENSKMAG00000018468	larp1	88	93.985	ENSHCOG00000010786	larp1	96	95.141	Hippocampus_comes
ENSKMAG00000018468	larp1	96	74.788	ENSIPUG00000019105	Larp1	95	77.311	Ictalurus_punctatus
ENSKMAG00000018468	larp1	95	66.353	ENSSTOG00000005678	LARP1	86	77.183	Ictidomys_tridecemlineatus
ENSKMAG00000018468	larp1	95	64.004	ENSJJAG00000016950	Larp1	97	62.205	Jaculus_jaculus
ENSKMAG00000018468	larp1	99	86.179	ENSLBEG00000027172	larp1	100	84.051	Labrus_bergylta
ENSKMAG00000018468	larp1	94	78.022	ENSLOCG00000012457	larp1	99	77.622	Lepisosteus_oculatus
ENSKMAG00000018468	larp1	98	65.895	ENSLAFG00000008991	LARP1	97	64.860	Loxodonta_africana
ENSKMAG00000018468	larp1	95	67.996	ENSMFAG00000031651	LARP1	90	68.650	Macaca_fascicularis
ENSKMAG00000018468	larp1	95	65.304	ENSMMUG00000009411	LARP1	87	76.305	Macaca_mulatta
ENSKMAG00000018468	larp1	87	70.341	ENSMNEG00000039294	LARP1	95	70.704	Macaca_nemestrina
ENSKMAG00000018468	larp1	95	68.101	ENSMLEG00000035142	LARP1	90	68.757	Mandrillus_leucophaeus
ENSKMAG00000018468	larp1	99	89.857	ENSMAMG00000021788	larp1	100	86.685	Mastacembelus_armatus
ENSKMAG00000018468	larp1	99	89.409	ENSMZEG00005009345	larp1	99	89.308	Maylandia_zebra
ENSKMAG00000018468	larp1	98	69.713	ENSMGAG00000005696	LARP1	96	70.923	Meleagris_gallopavo
ENSKMAG00000018468	larp1	98	67.480	ENSMAUG00000001385	Larp1	97	65.421	Mesocricetus_auratus
ENSKMAG00000018468	larp1	95	67.531	ENSMICG00000000837	LARP1	95	71.231	Microcebus_murinus
ENSKMAG00000018468	larp1	97	67.074	ENSMOCG00000008920	Larp1	97	66.040	Microtus_ochrogaster
ENSKMAG00000018468	larp1	96	65.894	ENSMMOG00000013364	larp1	99	68.186	Mola_mola
ENSKMAG00000018468	larp1	98	67.919	ENSMODG00000008663	LARP1	96	70.362	Monodelphis_domestica
ENSKMAG00000018468	larp1	99	90.872	ENSMALG00000017180	larp1	100	87.890	Monopterus_albus
ENSKMAG00000018468	larp1	98	67.343	MGP_CAROLIEiJ_G0016383	Larp1	97	66.417	Mus_caroli
ENSKMAG00000018468	larp1	98	67.444	ENSMUSG00000037331	Larp1	97	66.511	Mus_musculus
ENSKMAG00000018468	larp1	98	67.781	MGP_PahariEiJ_G0017518	Larp1	97	66.167	Mus_pahari
ENSKMAG00000018468	larp1	98	67.444	MGP_SPRETEiJ_G0017225	Larp1	97	66.511	Mus_spretus
ENSKMAG00000018468	larp1	79	65.995	ENSMPUG00000013564	LARP1	99	61.622	Mustela_putorius_furo
ENSKMAG00000018468	larp1	96	64.995	ENSMLUG00000002608	LARP1	97	66.385	Myotis_lucifugus
ENSKMAG00000018468	larp1	96	66.036	ENSNGAG00000001098	Larp1	96	66.808	Nannospalax_galili
ENSKMAG00000018468	larp1	96	86.004	ENSNBRG00000008963	larp1	98	87.897	Neolamprologus_brichardi
ENSKMAG00000018468	larp1	95	66.981	ENSNLEG00000016588	LARP1	96	66.452	Nomascus_leucogenys
ENSKMAG00000018468	larp1	90	68.036	ENSMEUG00000002957	LARP1	96	66.310	Notamacropus_eugenii
ENSKMAG00000018468	larp1	95	68.470	ENSOPRG00000013014	LARP1	96	69.574	Ochotona_princeps
ENSKMAG00000018468	larp1	96	68.050	ENSODEG00000010824	LARP1	96	69.329	Octodon_degus
ENSKMAG00000018468	larp1	99	85.091	ENSONIG00000017308	larp1	99	83.938	Oreochromis_niloticus
ENSKMAG00000018468	larp1	98	69.561	ENSOANG00000005096	LARP1	95	71.748	Ornithorhynchus_anatinus
ENSKMAG00000018468	larp1	96	68.144	ENSOCUG00000013066	LARP1	91	76.826	Oryctolagus_cuniculus
ENSKMAG00000018468	larp1	99	87.423	ENSORLG00000000824	larp1	100	83.796	Oryzias_latipes
ENSKMAG00000018468	larp1	99	87.423	ENSORLG00020022241	larp1	100	83.922	Oryzias_latipes_hni
ENSKMAG00000018468	larp1	99	85.773	ENSORLG00015007538	larp1	100	83.985	Oryzias_latipes_hsok
ENSKMAG00000018468	larp1	99	85.832	ENSOMEG00000003134	larp1	100	84.049	Oryzias_melastigma
ENSKMAG00000018468	larp1	98	67.240	ENSOGAG00000016750	LARP1	96	69.329	Otolemur_garnettii
ENSKMAG00000018468	larp1	95	67.364	ENSOARG00000009893	LARP1	97	67.728	Ovis_aries
ENSKMAG00000018468	larp1	95	67.883	ENSPPAG00000042993	LARP1	90	68.034	Pan_paniscus
ENSKMAG00000018468	larp1	96	67.149	ENSPPRG00000009780	LARP1	91	67.479	Panthera_pardus
ENSKMAG00000018468	larp1	96	67.358	ENSPTIG00000007013	LARP1	91	68.008	Panthera_tigris_altaica
ENSKMAG00000018468	larp1	95	67.883	ENSPTRG00000017447	LARP1	97	62.397	Pan_troglodytes
ENSKMAG00000018468	larp1	95	67.996	ENSPANG00000008080	LARP1	93	66.906	Papio_anubis
ENSKMAG00000018468	larp1	96	70.917	ENSPKIG00000017153	-	99	68.854	Paramormyrops_kingsleyae
ENSKMAG00000018468	larp1	98	79.628	ENSPKIG00000010096	larp1	99	76.987	Paramormyrops_kingsleyae
ENSKMAG00000018468	larp1	93	81.648	ENSPMGG00000011599	larp1	97	80.739	Periophthalmus_magnuspinnatus
ENSKMAG00000018468	larp1	99	65.123	ENSPEMG00000022523	Larp1	96	66.844	Peromyscus_maniculatus_bairdii
ENSKMAG00000018468	larp1	95	70.464	ENSPCIG00000019242	LARP1	89	66.945	Phascolarctos_cinereus
ENSKMAG00000018468	larp1	99	88.012	ENSPFOG00000005836	larp1	100	85.209	Poecilia_formosa
ENSKMAG00000018468	larp1	99	87.602	ENSPLAG00000008936	larp1	100	85.622	Poecilia_latipinna
ENSKMAG00000018468	larp1	99	87.705	ENSPMEG00000013656	larp1	100	84.991	Poecilia_mexicana
ENSKMAG00000018468	larp1	99	87.667	ENSPREG00000005726	larp1	99	87.667	Poecilia_reticulata
ENSKMAG00000018468	larp1	95	66.771	ENSPCAG00000006407	LARP1	96	67.556	Procavia_capensis
ENSKMAG00000018468	larp1	95	61.186	ENSPCOG00000016949	LARP1	96	64.643	Propithecus_coquereli
ENSKMAG00000018468	larp1	95	68.497	ENSPVAG00000002262	LARP1	97	64.620	Pteropus_vampyrus
ENSKMAG00000018468	larp1	99	89.511	ENSPNYG00000007938	larp1	99	89.409	Pundamilia_nyererei
ENSKMAG00000018468	larp1	98	78.333	ENSPNAG00000021427	larp1	99	77.873	Pygocentrus_nattereri
ENSKMAG00000018468	larp1	96	65.531	ENSRNOG00000031544	Larp1	86	76.869	Rattus_norvegicus
ENSKMAG00000018468	larp1	99	66.100	ENSRBIG00000038005	LARP1	97	64.941	Rhinopithecus_bieti
ENSKMAG00000018468	larp1	95	67.779	ENSRROG00000034073	LARP1	95	70.819	Rhinopithecus_roxellana
ENSKMAG00000018468	larp1	95	67.779	ENSSBOG00000019816	LARP1	87	76.197	Saimiri_boliviensis_boliviensis
ENSKMAG00000018468	larp1	98	69.057	ENSSHAG00000011115	LARP1	96	71.429	Sarcophilus_harrisii
ENSKMAG00000018468	larp1	96	77.968	ENSSFOG00015018058	-	96	75.145	Scleropages_formosus
ENSKMAG00000018468	larp1	98	77.677	ENSSFOG00015020304	larp1	93	78.986	Scleropages_formosus
ENSKMAG00000018468	larp1	92	84.573	ENSSMAG00000007468	larp1	98	83.728	Scophthalmus_maximus
ENSKMAG00000018468	larp1	99	91.057	ENSSDUG00000000268	larp1	100	88.140	Seriola_dumerili
ENSKMAG00000018468	larp1	91	84.512	ENSSLDG00000016505	larp1	99	87.617	Seriola_lalandi_dorsalis
ENSKMAG00000018468	larp1	59	83.936	ENSSARG00000013907	-	83	84.400	Sorex_araneus
ENSKMAG00000018468	larp1	98	70.582	ENSSPUG00000012179	-	97	67.463	Sphenodon_punctatus
ENSKMAG00000018468	larp1	99	90.467	ENSSPAG00000003910	larp1	100	87.923	Stegastes_partitus
ENSKMAG00000018468	larp1	95	68.470	ENSSSCG00000017069	LARP1	96	70.127	Sus_scrofa
ENSKMAG00000018468	larp1	95	70.917	ENSTGUG00000000704	LARP1	100	71.567	Taeniopygia_guttata
ENSKMAG00000018468	larp1	99	87.295	ENSTRUG00000009470	larp1	99	83.533	Takifugu_rubripes
ENSKMAG00000018468	larp1	92	67.427	ENSTBEG00000003381	LARP1	98	68.470	Tupaia_belangeri
ENSKMAG00000018468	larp1	95	68.163	ENSTTRG00000015934	LARP1	97	69.075	Tursiops_truncatus
ENSKMAG00000018468	larp1	95	68.177	ENSUAMG00000019334	LARP1	97	64.631	Ursus_americanus
ENSKMAG00000018468	larp1	95	66.322	ENSUMAG00000002934	LARP1	96	69.222	Ursus_maritimus
ENSKMAG00000018468	larp1	87	71.543	ENSVVUG00000004644	LARP1	95	71.379	Vulpes_vulpes
ENSKMAG00000018468	larp1	99	70.649	ENSXETG00000008413	larp1	99	67.253	Xenopus_tropicalis
ENSKMAG00000018468	larp1	88	87.045	ENSXCOG00000004022	larp1	98	86.739	Xiphophorus_couchianus
ENSKMAG00000018468	larp1	99	87.922	ENSXMAG00000018780	larp1	100	85.158	Xiphophorus_maculatus