EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018530 (Gene tree)
Gene ID: 108244298
Gene Symbol: -
Alias: zgc:109966
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 15115 bases
Position: chrLWHD01000137.1:984440-999554
Accession: 108244298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025032	KH_1	PF00013.29	1.4e-54	1	3
ENSKMAP00000025032	KH_1	PF00013.29	1.4e-54	2	3
ENSKMAP00000025032	KH_1	PF00013.29	1.4e-54	3	3
ENSKMAP00000025056	KH_1	PF00013.29	5.7e-49	1	3
ENSKMAP00000025056	KH_1	PF00013.29	5.7e-49	2	3
ENSKMAP00000025056	KH_1	PF00013.29	5.7e-49	3	3
ENSKMAP00000025032	KH_2	PF07650.17	2.9e-14	1	1
ENSKMAP00000025056	KH_2	PF07650.17	7.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025374	-	981	-	ENSKMAP00000025056	326 (aa)	-	-
ENSKMAT00000025348	-	4522	XM_017430381	ENSKMAP00000025032	327 (aa)	XP_017285870	UPI0007F8AE39

Gene Model

Click here to download ENSKMAG00000018530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018530	-	61	38.462	ENSKMAG00000016886	fubp3	63	38.462
ENSKMAG00000018530	-	96	76.012	ENSKMAG00000011367	-	98	76.012
ENSKMAG00000018530	-	71	55.556	ENSKMAG00000020943	hnrnpk	56	55.556
ENSKMAG00000018530	-	100	89.489	ENSKMAG00000003046	pcbp3	100	89.489
ENSKMAG00000018530	-	91	35.404	ENSKMAG00000012177	igf2bp2b	64	33.750
ENSKMAG00000018530	-	94	31.551	ENSKMAG00000019838	igf2bp3	66	31.461
ENSKMAG00000018530	-	76	34.091	ENSKMAG00000018897	fubp1	51	38.095
ENSKMAG00000018530	-	94	60.736	ENSKMAG00000014252	pcbp4	71	58.909
ENSKMAG00000018530	-	79	46.914	ENSKMAG00000012225	hnrpkl	87	30.612
ENSKMAG00000018530	-	74	83.146	ENSKMAG00000016179	-	87	83.146
ENSKMAG00000018530	-	92	63.385	ENSKMAG00000017554	-	97	60.265
ENSKMAG00000018530	-	94	77.389	ENSKMAG00000012031	PCBP2	96	77.389
ENSKMAG00000018530	-	70	41.791	ENSKMAG00000018579	khsrp	55	41.791
ENSKMAG00000018530	-	92	41.270	ENSKMAG00000021164	-	67	41.270
ENSKMAG00000018530	-	55	36.875	ENSKMAG00000015047	-	87	36.875
ENSKMAG00000018530	-	92	30.657	ENSKMAG00000016694	igf2bp1	57	30.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018530	-	95	93.548	ENSAPOG00000020003	pcbp3	86	93.548	Acanthochromis_polyacanthus
ENSKMAG00000018530	-	100	98.471	ENSAPOG00000016582	-	100	98.471	Acanthochromis_polyacanthus
ENSKMAG00000018530	-	93	90.712	ENSAMEG00000001697	-	96	86.391	Ailuropoda_melanoleuca
ENSKMAG00000018530	-	100	92.638	ENSACIG00000002739	-	100	92.638	Amphilophus_citrinellus
ENSKMAG00000018530	-	100	87.143	ENSACIG00000010933	pcbp3	100	87.143	Amphilophus_citrinellus
ENSKMAG00000018530	-	97	94.322	ENSAOCG00000008592	-	100	94.322	Amphiprion_ocellaris
ENSKMAG00000018530	-	91	94.346	ENSAOCG00000007806	-	97	94.346	Amphiprion_ocellaris
ENSKMAG00000018530	-	100	89.489	ENSAPEG00000008011	pcbp3	100	89.489	Amphiprion_percula
ENSKMAG00000018530	-	100	91.743	ENSAPEG00000005209	-	97	96.463	Amphiprion_percula
ENSKMAG00000018530	-	95	87.087	ENSATEG00000015787	-	100	87.087	Anabas_testudineus
ENSKMAG00000018530	-	100	91.411	ENSATEG00000009833	-	97	95.498	Anabas_testudineus
ENSKMAG00000018530	-	97	75.068	ENSAPLG00000008951	-	81	75.068	Anas_platyrhynchos
ENSKMAG00000018530	-	93	92.138	ENSAPLG00000002975	-	95	92.138	Anas_platyrhynchos
ENSKMAG00000018530	-	98	80.392	ENSACAG00000004607	-	96	84.726	Anolis_carolinensis
ENSKMAG00000018530	-	97	79.641	ENSACAG00000009819	-	94	83.692	Anolis_carolinensis
ENSKMAG00000018530	-	91	96.053	ENSANAG00000030702	-	96	96.053	Aotus_nancymaae
ENSKMAG00000018530	-	100	88.636	ENSACLG00000011835	pcbp3	100	88.636	Astatotilapia_calliptera
ENSKMAG00000018530	-	100	97.859	ENSACLG00000003801	-	100	97.859	Astatotilapia_calliptera
ENSKMAG00000018530	-	95	91.290	ENSAMXG00000013588	-	100	91.290	Astyanax_mexicanus
ENSKMAG00000018530	-	95	67.988	ENSAMXG00000001760	zgc:110045	73	67.372	Astyanax_mexicanus
ENSKMAG00000018530	-	100	91.143	ENSAMXG00000003440	pcbp3	100	91.143	Astyanax_mexicanus
ENSKMAG00000018530	-	89	96.507	ENSCAFG00020019472	-	81	96.507	Canis_lupus_dingo
ENSKMAG00000018530	-	93	96.382	ENSCSAG00000007440	-	87	96.382	Chlorocebus_sabaeus
ENSKMAG00000018530	-	98	92.500	ENSCPBG00000012151	-	95	92.500	Chrysemys_picta_bellii
ENSKMAG00000018530	-	97	80.588	ENSCPBG00000000733	-	75	80.588	Chrysemys_picta_bellii
ENSKMAG00000018530	-	100	76.744	ENSCSEG00000016984	-	100	76.744	Cynoglossus_semilaevis
ENSKMAG00000018530	-	95	92.258	ENSCSEG00000000822	pcbp3	99	92.258	Cynoglossus_semilaevis
ENSKMAG00000018530	-	100	97.859	ENSCVAG00000005262	-	100	97.859	Cyprinodon_variegatus
ENSKMAG00000018530	-	100	89.205	ENSCVAG00000014482	pcbp3	100	89.205	Cyprinodon_variegatus
ENSKMAG00000018530	-	100	91.429	ENSDARG00000054378	pcbp3	100	91.429	Danio_rerio
ENSKMAG00000018530	-	93	82.237	ENSETEG00000015988	-	95	82.237	Echinops_telfairi
ENSKMAG00000018530	-	94	80.511	ENSEBUG00000007485	-	91	82.110	Eptatretus_burgeri
ENSKMAG00000018530	-	90	69.636	ENSEBUG00000005495	pcbp3	74	69.636	Eptatretus_burgeri
ENSKMAG00000018530	-	93	73.234	ENSEBUG00000016192	pcbp3	99	73.234	Eptatretus_burgeri
ENSKMAG00000018530	-	100	97.248	ENSELUG00000001560	-	91	97.248	Esox_lucius
ENSKMAG00000018530	-	100	89.518	ENSELUG00000003521	pcbp3	100	89.518	Esox_lucius
ENSKMAG00000018530	-	93	96.053	ENSFALG00000003949	-	95	96.053	Ficedula_albicollis
ENSKMAG00000018530	-	98	74.932	ENSFALG00000004411	-	77	74.932	Ficedula_albicollis
ENSKMAG00000018530	-	97	91.483	ENSFHEG00000016615	pcbp3	97	91.483	Fundulus_heteroclitus
ENSKMAG00000018530	-	100	90.214	ENSFHEG00000006539	-	97	95.177	Fundulus_heteroclitus
ENSKMAG00000018530	-	94	80.480	ENSGMOG00000011992	pcbp3	96	80.480	Gadus_morhua
ENSKMAG00000018530	-	94	70.517	ENSGMOG00000008611	-	99	70.517	Gadus_morhua
ENSKMAG00000018530	-	98	81.180	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSKMAG00000018530	-	97	78.485	ENSGALG00000013155	-	98	80.734	Gallus_gallus
ENSKMAG00000018530	-	100	81.818	ENSGAFG00000011430	pcbp3	96	85.285	Gambusia_affinis
ENSKMAG00000018530	-	100	98.471	ENSGAFG00000010274	-	100	98.471	Gambusia_affinis
ENSKMAG00000018530	-	95	91.843	ENSGACG00000002266	-	97	91.843	Gasterosteus_aculeatus
ENSKMAG00000018530	-	95	80.737	ENSGACG00000014955	-	97	80.737	Gasterosteus_aculeatus
ENSKMAG00000018530	-	89	88.764	ENSGAGG00000000271	-	100	88.764	Gopherus_agassizii
ENSKMAG00000018530	-	83	82.938	ENSGAGG00000006956	-	78	87.958	Gopherus_agassizii
ENSKMAG00000018530	-	100	88.636	ENSHBUG00000010697	pcbp3	98	92.903	Haplochromis_burtoni
ENSKMAG00000018530	-	100	97.859	ENSHBUG00000021782	-	100	97.859	Haplochromis_burtoni
ENSKMAG00000018530	-	100	88.146	ENSHCOG00000006067	-	97	92.283	Hippocampus_comes
ENSKMAG00000018530	-	100	89.459	ENSHCOG00000017868	pcbp3	100	89.459	Hippocampus_comes
ENSKMAG00000018530	-	100	89.264	ENSIPUG00000006238	pcbp3	97	94.212	Ictalurus_punctatus
ENSKMAG00000018530	-	96	92.332	ENSLBEG00000006201	pcbp3	96	92.332	Labrus_bergylta
ENSKMAG00000018530	-	100	84.969	ENSLBEG00000006542	-	100	83.436	Labrus_bergylta
ENSKMAG00000018530	-	97	75.138	ENSLACG00000010804	zgc:110045	76	75.138	Latimeria_chalumnae
ENSKMAG00000018530	-	97	80.441	ENSLACG00000010386	pcbp3	77	80.441	Latimeria_chalumnae
ENSKMAG00000018530	-	93	82.569	ENSLOCG00000005058	zgc:110045	80	82.569	Lepisosteus_oculatus
ENSKMAG00000018530	-	98	85.757	ENSLOCG00000009369	pcbp3	96	90.741	Lepisosteus_oculatus
ENSKMAG00000018530	-	95	93.226	ENSMAMG00000022336	pcbp3	93	93.226	Mastacembelus_armatus
ENSKMAG00000018530	-	100	90.184	ENSMAMG00000011620	-	97	94.212	Mastacembelus_armatus
ENSKMAG00000018530	-	100	88.166	ENSMZEG00005014882	-	100	88.757	Maylandia_zebra
ENSKMAG00000018530	-	100	86.857	ENSMZEG00005008993	pcbp3	100	86.857	Maylandia_zebra
ENSKMAG00000018530	-	93	80.403	ENSMGAG00000001883	-	96	80.692	Meleagris_gallopavo
ENSKMAG00000018530	-	98	74.932	ENSMGAG00000006794	-	77	74.932	Meleagris_gallopavo
ENSKMAG00000018530	-	95	92.308	ENSMMOG00000000730	pcbp3	88	92.308	Mola_mola
ENSKMAG00000018530	-	95	94.855	ENSMMOG00000005216	-	97	94.855	Mola_mola
ENSKMAG00000018530	-	69	77.103	ENSMODG00000027884	-	93	77.103	Monodelphis_domestica
ENSKMAG00000018530	-	100	87.179	ENSMALG00000000691	pcbp3	100	87.179	Monopterus_albus
ENSKMAG00000018530	-	98	79.351	ENSMPUG00000001779	-	88	83.642	Mustela_putorius_furo
ENSKMAG00000018530	-	100	88.757	ENSNBRG00000016714	-	99	89.939	Neolamprologus_brichardi
ENSKMAG00000018530	-	100	86.857	ENSNBRG00000016409	-	100	86.857	Neolamprologus_brichardi
ENSKMAG00000018530	-	94	80.758	ENSOPRG00000003431	-	99	81.739	Ochotona_princeps
ENSKMAG00000018530	-	95	83.853	ENSONIG00000012122	-	98	83.853	Oreochromis_niloticus
ENSKMAG00000018530	-	95	97.428	ENSONIG00000004611	-	97	97.428	Oreochromis_niloticus
ENSKMAG00000018530	-	93	95.724	ENSOCUG00000002696	-	87	95.724	Oryctolagus_cuniculus
ENSKMAG00000018530	-	99	97.546	ENSORLG00000022739	-	99	97.546	Oryzias_latipes
ENSKMAG00000018530	-	95	96.129	ENSORLG00000000059	pcbp3	100	96.129	Oryzias_latipes
ENSKMAG00000018530	-	95	96.129	ENSORLG00020012671	pcbp3	97	96.129	Oryzias_latipes_hni
ENSKMAG00000018530	-	99	97.239	ENSORLG00020006124	-	99	97.239	Oryzias_latipes_hni
ENSKMAG00000018530	-	95	96.129	ENSORLG00015000429	pcbp3	97	96.129	Oryzias_latipes_hsok
ENSKMAG00000018530	-	99	97.546	ENSORLG00015008051	-	99	97.546	Oryzias_latipes_hsok
ENSKMAG00000018530	-	95	97.428	ENSOMEG00000020162	-	97	97.428	Oryzias_melastigma
ENSKMAG00000018530	-	90	95.730	ENSOMEG00000020811	pcbp3	97	95.730	Oryzias_melastigma
ENSKMAG00000018530	-	98	79.109	ENSOGAG00000008044	-	96	82.857	Otolemur_garnettii
ENSKMAG00000018530	-	100	97.248	ENSPKIG00000019329	pcbp3	100	97.248	Paramormyrops_kingsleyae
ENSKMAG00000018530	-	77	84.127	ENSPKIG00000020913	-	82	84.492	Paramormyrops_kingsleyae
ENSKMAG00000018530	-	93	82.555	ENSPSIG00000014970	-	95	83.178	Pelodiscus_sinensis
ENSKMAG00000018530	-	94	77.011	ENSPSIG00000008350	-	72	77.011	Pelodiscus_sinensis
ENSKMAG00000018530	-	100	89.429	ENSPMGG00000022383	pcbp3	100	89.429	Periophthalmus_magnuspinnatus
ENSKMAG00000018530	-	94	73.567	ENSPMAG00000004551	pcbp3	90	73.567	Petromyzon_marinus
ENSKMAG00000018530	-	76	89.189	ENSPMAG00000004637	-	96	89.189	Petromyzon_marinus
ENSKMAG00000018530	-	98	84.866	ENSPCIG00000028092	-	96	90.783	Phascolarctos_cinereus
ENSKMAG00000018530	-	99	86.269	ENSPLAG00000004074	-	89	91.250	Poecilia_latipinna
ENSKMAG00000018530	-	100	77.654	ENSPLAG00000011449	pcbp3	100	75.250	Poecilia_latipinna
ENSKMAG00000018530	-	100	88.701	ENSPMEG00000021239	pcbp3	100	88.701	Poecilia_mexicana
ENSKMAG00000018530	-	96	93.631	ENSPMEG00000006653	-	99	89.911	Poecilia_mexicana
ENSKMAG00000018530	-	95	95.177	ENSPREG00000020585	-	97	95.177	Poecilia_reticulata
ENSKMAG00000018530	-	95	91.346	ENSPREG00000015736	pcbp3	99	91.346	Poecilia_reticulata
ENSKMAG00000018530	-	95	93.226	ENSPNYG00000012326	pcbp3	95	93.226	Pundamilia_nyererei
ENSKMAG00000018530	-	100	89.877	ENSPNYG00000013205	-	97	94.855	Pundamilia_nyererei
ENSKMAG00000018530	-	100	87.464	ENSPNAG00000008541	-	98	91.883	Pygocentrus_nattereri
ENSKMAG00000018530	-	95	97.106	ENSPNAG00000015104	pcbp3	97	97.106	Pygocentrus_nattereri
ENSKMAG00000018530	-	93	96.382	ENSRNOG00000001245	Pcbp3	95	96.382	Rattus_norvegicus
ENSKMAG00000018530	-	93	84.494	ENSRBIG00000028177	-	87	84.494	Rhinopithecus_bieti
ENSKMAG00000018530	-	93	90.123	ENSSHAG00000007890	-	96	90.123	Sarcophilus_harrisii
ENSKMAG00000018530	-	100	88.857	ENSSFOG00015014706	pcbp3	100	88.857	Scleropages_formosus
ENSKMAG00000018530	-	100	97.859	ENSSFOG00015010205	pcbp3	100	97.859	Scleropages_formosus
ENSKMAG00000018530	-	92	85.050	ENSSFOG00015007118	-	92	85.050	Scleropages_formosus
ENSKMAG00000018530	-	100	97.859	ENSSMAG00000003135	-	100	97.859	Scophthalmus_maximus
ENSKMAG00000018530	-	95	93.548	ENSSMAG00000011929	pcbp3	97	93.548	Scophthalmus_maximus
ENSKMAG00000018530	-	100	92.121	ENSSDUG00000008502	-	100	92.121	Seriola_dumerili
ENSKMAG00000018530	-	97	84.592	ENSSDUG00000011608	pcbp3	99	86.269	Seriola_dumerili
ENSKMAG00000018530	-	97	84.592	ENSSLDG00000008518	pcbp3	99	86.269	Seriola_lalandi_dorsalis
ENSKMAG00000018530	-	100	98.471	ENSSLDG00000020161	-	100	98.471	Seriola_lalandi_dorsalis
ENSKMAG00000018530	-	98	73.554	ENSSPUG00000013214	-	84	89.617	Sphenodon_punctatus
ENSKMAG00000018530	-	100	77.429	ENSSPAG00000023341	-	100	77.429	Stegastes_partitus
ENSKMAG00000018530	-	91	94.346	ENSSPAG00000004190	-	97	94.346	Stegastes_partitus
ENSKMAG00000018530	-	93	87.037	ENSTGUG00000003316	-	96	87.037	Taeniopygia_guttata
ENSKMAG00000018530	-	93	89.474	ENSTGUG00000008158	-	96	89.474	Taeniopygia_guttata
ENSKMAG00000018530	-	91	98.561	ENSTRUG00000006280	-	89	98.561	Takifugu_rubripes
ENSKMAG00000018530	-	100	90.882	ENSTRUG00000013604	pcbp3	100	90.882	Takifugu_rubripes
ENSKMAG00000018530	-	98	79.775	ENSTTRG00000015075	-	96	83.285	Tursiops_truncatus
ENSKMAG00000018530	-	93	73.938	ENSXETG00000010491	pcbp2	77	73.938	Xenopus_tropicalis
ENSKMAG00000018530	-	93	88.580	ENSXETG00000011483	pcbp1	96	88.580	Xenopus_tropicalis
ENSKMAG00000018530	-	100	88.701	ENSXCOG00000020481	pcbp3	100	88.701	Xiphophorus_couchianus
ENSKMAG00000018530	-	100	89.489	ENSXMAG00000008175	pcbp3	100	89.489	Xiphophorus_maculatus
ENSKMAG00000018530	-	100	98.471	ENSXMAG00000028711	-	100	98.471	Xiphophorus_maculatus