EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018558 (Gene tree)
Gene ID: 108247712
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8256 bases
Position: chrLWHD01000005.1:7426745-7435000
Accession: 108247712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025098	TUDOR	PF00567.24	2.6e-119	1	4
ENSKMAP00000025098	TUDOR	PF00567.24	2.6e-119	2	4
ENSKMAP00000025098	TUDOR	PF00567.24	2.6e-119	3	4
ENSKMAP00000025098	TUDOR	PF00567.24	2.6e-119	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025418	-	3120	XM_025009995	ENSKMAP00000025098	1039 (aa)	XP_024865763	-

Gene Model

Click here to download ENSKMAG00000018558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018558	tdrd1	75	35.714	ENSKMAG00000015790	-	54	35.714
ENSKMAG00000018558	tdrd1	73	34.667	ENSKMAG00000003969	-	56	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018558	tdrd1	96	34.926	ENSG00000095627	TDRD1	81	34.926	Homo_sapiens
ENSKMAG00000018558	tdrd1	95	65.010	ENSAPOG00000023199	tdrd1	90	65.302	Acanthochromis_polyacanthus
ENSKMAG00000018558	tdrd1	88	34.583	ENSAMEG00000015182	TDRD1	82	34.583	Ailuropoda_melanoleuca
ENSKMAG00000018558	tdrd1	97	66.602	ENSACIG00000010576	tdrd1	90	66.602	Amphilophus_citrinellus
ENSKMAG00000018558	tdrd1	97	71.344	ENSAOCG00000007059	tdrd1	90	62.808	Amphiprion_ocellaris
ENSKMAG00000018558	tdrd1	97	64.860	ENSAPEG00000017049	tdrd1	89	65.634	Amphiprion_percula
ENSKMAG00000018558	tdrd1	96	64.043	ENSATEG00000021627	tdrd1	91	64.043	Anabas_testudineus
ENSKMAG00000018558	tdrd1	92	31.809	ENSAPLG00000012609	TDRD1	91	31.809	Anas_platyrhynchos
ENSKMAG00000018558	tdrd1	95	32.337	ENSACAG00000009854	TDRD1	82	32.337	Anolis_carolinensis
ENSKMAG00000018558	tdrd1	90	35.821	ENSANAG00000035710	TDRD1	81	35.821	Aotus_nancymaae
ENSKMAG00000018558	tdrd1	99	63.305	ENSACLG00000014107	tdrd1	89	63.305	Astatotilapia_calliptera
ENSKMAG00000018558	tdrd1	92	48.335	ENSAMXG00000015146	tdrd1	84	48.335	Astyanax_mexicanus
ENSKMAG00000018558	tdrd1	91	34.152	ENSBTAG00000006855	TDRD1	82	34.185	Bos_taurus
ENSKMAG00000018558	tdrd1	90	35.118	ENSCJAG00000019270	TDRD1	81	35.118	Callithrix_jacchus
ENSKMAG00000018558	tdrd1	93	33.137	ENSCAFG00000011266	TDRD1	83	33.137	Canis_familiaris
ENSKMAG00000018558	tdrd1	93	33.137	ENSCAFG00020012373	TDRD1	81	34.713	Canis_lupus_dingo
ENSKMAG00000018558	tdrd1	89	34.852	ENSCHIG00000012766	TDRD1	81	34.852	Capra_hircus
ENSKMAG00000018558	tdrd1	95	34.615	ENSTSYG00000004935	TDRD1	80	34.615	Carlito_syrichta
ENSKMAG00000018558	tdrd1	88	34.624	ENSCPOG00000004190	TDRD1	81	34.624	Cavia_porcellus
ENSKMAG00000018558	tdrd1	91	34.686	ENSCCAG00000027375	TDRD1	81	35.791	Cebus_capucinus
ENSKMAG00000018558	tdrd1	90	35.244	ENSCATG00000035999	TDRD1	83	34.144	Cercocebus_atys
ENSKMAG00000018558	tdrd1	90	33.060	ENSCLAG00000003935	TDRD1	79	33.094	Chinchilla_lanigera
ENSKMAG00000018558	tdrd1	91	34.347	ENSCSAG00000005071	TDRD1	81	34.347	Chlorocebus_sabaeus
ENSKMAG00000018558	tdrd1	89	46.565	ENSCHOG00000001690	TDRD1	65	46.565	Choloepus_hoffmanni
ENSKMAG00000018558	tdrd1	92	35.802	ENSCPBG00000003780	TDRD1	81	35.608	Chrysemys_picta_bellii
ENSKMAG00000018558	tdrd1	90	35.313	ENSCANG00000035172	TDRD1	81	35.313	Colobus_angolensis_palliatus
ENSKMAG00000018558	tdrd1	88	34.694	ENSCGRG00001004632	Tdrd1	84	34.694	Cricetulus_griseus_chok1gshd
ENSKMAG00000018558	tdrd1	91	34.079	ENSCGRG00000004981	Tdrd1	83	34.079	Cricetulus_griseus_crigri
ENSKMAG00000018558	tdrd1	91	52.544	ENSCSEG00000006983	tdrd1	91	51.530	Cynoglossus_semilaevis
ENSKMAG00000018558	tdrd1	97	60.333	ENSCVAG00000020980	tdrd1	99	60.333	Cyprinodon_variegatus
ENSKMAG00000018558	tdrd1	97	46.103	ENSDARG00000007465	tdrd1	89	46.103	Danio_rerio
ENSKMAG00000018558	tdrd1	90	34.861	ENSDNOG00000012114	TDRD1	76	34.968	Dasypus_novemcinctus
ENSKMAG00000018558	tdrd1	91	34.211	ENSDORG00000009986	Tdrd1	82	34.211	Dipodomys_ordii
ENSKMAG00000018558	tdrd1	93	30.955	ENSETEG00000020143	TDRD1	82	30.955	Echinops_telfairi
ENSKMAG00000018558	tdrd1	56	31.707	ENSEBUG00000003519	-	94	31.707	Eptatretus_burgeri
ENSKMAG00000018558	tdrd1	92	32.598	ENSEASG00005014802	TDRD1	81	33.690	Equus_asinus_asinus
ENSKMAG00000018558	tdrd1	92	34.928	ENSECAG00000009748	TDRD1	80	33.534	Equus_caballus
ENSKMAG00000018558	tdrd1	90	32.245	ENSEEUG00000010076	TDRD1	81	32.245	Erinaceus_europaeus
ENSKMAG00000018558	tdrd1	98	48.626	ENSELUG00000024364	tdrd1	90	48.626	Esox_lucius
ENSKMAG00000018558	tdrd1	90	33.367	ENSFCAG00000000632	TDRD1	80	34.509	Felis_catus
ENSKMAG00000018558	tdrd1	90	32.361	ENSFALG00000002237	TDRD1	97	32.361	Ficedula_albicollis
ENSKMAG00000018558	tdrd1	90	33.129	ENSFDAG00000013225	TDRD1	80	33.129	Fukomys_damarensis
ENSKMAG00000018558	tdrd1	99	48.556	ENSFHEG00000009203	tdrd1	96	48.556	Fundulus_heteroclitus
ENSKMAG00000018558	tdrd1	85	54.630	ENSGMOG00000016797	-	69	54.630	Gadus_morhua
ENSKMAG00000018558	tdrd1	90	31.417	ENSGALG00000046180	TDRD1	86	31.417	Gallus_gallus
ENSKMAG00000018558	tdrd1	98	59.924	ENSGAFG00000002668	tdrd1	89	59.924	Gambusia_affinis
ENSKMAG00000018558	tdrd1	92	62.127	ENSGACG00000006590	tdrd1	100	62.127	Gasterosteus_aculeatus
ENSKMAG00000018558	tdrd1	90	34.926	ENSGGOG00000004250	TDRD1	81	34.926	Gorilla_gorilla
ENSKMAG00000018558	tdrd1	99	64.122	ENSHBUG00000005216	tdrd1	91	64.122	Haplochromis_burtoni
ENSKMAG00000018558	tdrd1	92	31.463	ENSHGLG00000010877	TDRD1	81	31.463	Heterocephalus_glaber_female
ENSKMAG00000018558	tdrd1	88	34.505	ENSHGLG00100013857	TDRD1	85	34.505	Heterocephalus_glaber_male
ENSKMAG00000018558	tdrd1	97	50.499	ENSHCOG00000002840	tdrd1	89	50.499	Hippocampus_comes
ENSKMAG00000018558	tdrd1	92	50.249	ENSIPUG00000017232	tdrd1	90	50.400	Ictalurus_punctatus
ENSKMAG00000018558	tdrd1	90	35.300	ENSSTOG00000003221	TDRD1	81	35.300	Ictidomys_tridecemlineatus
ENSKMAG00000018558	tdrd1	90	35.474	ENSJJAG00000014720	Tdrd1	85	35.474	Jaculus_jaculus
ENSKMAG00000018558	tdrd1	98	63.208	ENSLBEG00000004161	tdrd1	86	63.302	Labrus_bergylta
ENSKMAG00000018558	tdrd1	91	34.350	ENSLACG00000011559	TDRD1	84	34.309	Latimeria_chalumnae
ENSKMAG00000018558	tdrd1	92	44.383	ENSLOCG00000012030	tdrd1	100	44.383	Lepisosteus_oculatus
ENSKMAG00000018558	tdrd1	85	33.557	ENSLAFG00000011575	TDRD1	94	33.557	Loxodonta_africana
ENSKMAG00000018558	tdrd1	90	35.456	ENSMFAG00000043487	TDRD1	81	35.456	Macaca_fascicularis
ENSKMAG00000018558	tdrd1	91	34.914	ENSMMUG00000022517	TDRD1	85	34.914	Macaca_mulatta
ENSKMAG00000018558	tdrd1	90	35.350	ENSMNEG00000031108	TDRD1	81	35.350	Macaca_nemestrina
ENSKMAG00000018558	tdrd1	90	35.350	ENSMLEG00000032281	TDRD1	81	35.350	Mandrillus_leucophaeus
ENSKMAG00000018558	tdrd1	93	65.323	ENSMAMG00000015287	tdrd1	91	63.672	Mastacembelus_armatus
ENSKMAG00000018558	tdrd1	99	63.492	ENSMZEG00005025315	tdrd1	89	63.492	Maylandia_zebra
ENSKMAG00000018558	tdrd1	90	32.988	ENSMGAG00000011067	TDRD1	99	32.988	Meleagris_gallopavo
ENSKMAG00000018558	tdrd1	82	35.838	ENSMAUG00000012164	Tdrd1	79	35.838	Mesocricetus_auratus
ENSKMAG00000018558	tdrd1	95	35.508	ENSMICG00000016190	TDRD1	82	35.508	Microcebus_murinus
ENSKMAG00000018558	tdrd1	91	33.766	ENSMOCG00000022360	Tdrd1	85	33.966	Microtus_ochrogaster
ENSKMAG00000018558	tdrd1	97	61.427	ENSMMOG00000014068	tdrd1	90	61.748	Mola_mola
ENSKMAG00000018558	tdrd1	92	32.287	ENSMODG00000009788	TDRD1	83	32.287	Monodelphis_domestica
ENSKMAG00000018558	tdrd1	95	62.795	ENSMALG00000022115	tdrd1	91	63.189	Monopterus_albus
ENSKMAG00000018558	tdrd1	91	33.733	MGP_CAROLIEiJ_G0023095	Tdrd1	82	33.801	Mus_caroli
ENSKMAG00000018558	tdrd1	91	33.537	ENSMUSG00000025081	Tdrd1	82	33.638	Mus_musculus
ENSKMAG00000018558	tdrd1	91	33.033	MGP_PahariEiJ_G0014583	Tdrd1	85	32.230	Mus_pahari
ENSKMAG00000018558	tdrd1	91	33.638	MGP_SPRETEiJ_G0024016	Tdrd1	80	33.740	Mus_spretus
ENSKMAG00000018558	tdrd1	83	36.033	ENSMPUG00000001987	TDRD1	75	36.033	Mustela_putorius_furo
ENSKMAG00000018558	tdrd1	89	34.797	ENSNGAG00000015231	Tdrd1	82	34.797	Nannospalax_galili
ENSKMAG00000018558	tdrd1	99	64.000	ENSNBRG00000017920	tdrd1	92	64.000	Neolamprologus_brichardi
ENSKMAG00000018558	tdrd1	89	34.084	ENSNLEG00000016228	TDRD1	80	34.084	Nomascus_leucogenys
ENSKMAG00000018558	tdrd1	92	30.030	ENSMEUG00000007717	TDRD1	81	30.030	Notamacropus_eugenii
ENSKMAG00000018558	tdrd1	90	33.333	ENSOPRG00000009180	TDRD1	81	33.333	Ochotona_princeps
ENSKMAG00000018558	tdrd1	90	34.267	ENSODEG00000011965	TDRD1	83	34.267	Octodon_degus
ENSKMAG00000018558	tdrd1	98	65.889	ENSONIG00000016382	tdrd1	90	65.889	Oreochromis_niloticus
ENSKMAG00000018558	tdrd1	91	34.274	ENSOANG00000001562	TDRD1	85	34.274	Ornithorhynchus_anatinus
ENSKMAG00000018558	tdrd1	91	35.121	ENSOCUG00000025327	TDRD1	83	35.121	Oryctolagus_cuniculus
ENSKMAG00000018558	tdrd1	97	58.932	ENSORLG00000004833	tdrd1	91	58.932	Oryzias_latipes
ENSKMAG00000018558	tdrd1	97	58.447	ENSORLG00020019231	tdrd1	92	60.041	Oryzias_latipes_hni
ENSKMAG00000018558	tdrd1	97	58.325	ENSORLG00015017184	tdrd1	90	58.325	Oryzias_latipes_hsok
ENSKMAG00000018558	tdrd1	98	58.548	ENSOMEG00000023637	tdrd1	87	58.548	Oryzias_melastigma
ENSKMAG00000018558	tdrd1	96	35.388	ENSOGAG00000001370	TDRD1	83	35.388	Otolemur_garnettii
ENSKMAG00000018558	tdrd1	90	34.958	ENSOARG00000014200	-	80	34.958	Ovis_aries
ENSKMAG00000018558	tdrd1	90	34.820	ENSPPAG00000041621	TDRD1	81	34.820	Pan_paniscus
ENSKMAG00000018558	tdrd1	95	34.578	ENSPPRG00000000191	TDRD1	80	34.685	Panthera_pardus
ENSKMAG00000018558	tdrd1	90	33.781	ENSPTIG00000010264	TDRD1	80	35.071	Panthera_tigris_altaica
ENSKMAG00000018558	tdrd1	90	34.820	ENSPTRG00000002958	TDRD1	81	34.820	Pan_troglodytes
ENSKMAG00000018558	tdrd1	90	35.244	ENSPANG00000020752	TDRD1	83	34.144	Papio_anubis
ENSKMAG00000018558	tdrd1	99	42.844	ENSPKIG00000010586	tdrd1	91	42.844	Paramormyrops_kingsleyae
ENSKMAG00000018558	tdrd1	88	34.512	ENSPSIG00000014655	TDRD1	80	34.512	Pelodiscus_sinensis
ENSKMAG00000018558	tdrd1	89	50.212	ENSPMGG00000018890	tdrd1	100	50.212	Periophthalmus_magnuspinnatus
ENSKMAG00000018558	tdrd1	91	34.665	ENSPEMG00000004582	Tdrd1	81	34.665	Peromyscus_maniculatus_bairdii
ENSKMAG00000018558	tdrd1	84	30.155	ENSPMAG00000004416	-	100	30.769	Petromyzon_marinus
ENSKMAG00000018558	tdrd1	90	33.505	ENSPCIG00000009739	TDRD1	81	34.113	Phascolarctos_cinereus
ENSKMAG00000018558	tdrd1	95	60.000	ENSPFOG00000002145	tdrd1	93	60.000	Poecilia_formosa
ENSKMAG00000018558	tdrd1	97	60.501	ENSPLAG00000010241	tdrd1	88	60.501	Poecilia_latipinna
ENSKMAG00000018558	tdrd1	97	59.249	ENSPMEG00000021893	tdrd1	87	59.249	Poecilia_mexicana
ENSKMAG00000018558	tdrd1	97	61.605	ENSPREG00000022663	tdrd1	88	61.605	Poecilia_reticulata
ENSKMAG00000018558	tdrd1	91	33.401	ENSPPYG00000002671	TDRD1	80	33.401	Pongo_abelii
ENSKMAG00000018558	tdrd1	90	36.957	ENSPCAG00000006692	TDRD1	70	36.957	Procavia_capensis
ENSKMAG00000018558	tdrd1	95	35.080	ENSPCOG00000026619	TDRD1	80	35.080	Propithecus_coquereli
ENSKMAG00000018558	tdrd1	93	33.038	ENSPVAG00000003055	TDRD1	82	33.038	Pteropus_vampyrus
ENSKMAG00000018558	tdrd1	98	63.516	ENSPNYG00000001706	tdrd1	90	63.516	Pundamilia_nyererei
ENSKMAG00000018558	tdrd1	96	48.799	ENSPNAG00000005831	tdrd1	89	49.064	Pygocentrus_nattereri
ENSKMAG00000018558	tdrd1	89	34.769	ENSRNOG00000017064	Tdrd1	82	34.769	Rattus_norvegicus
ENSKMAG00000018558	tdrd1	90	35.175	ENSRBIG00000029668	TDRD1	83	35.175	Rhinopithecus_bieti
ENSKMAG00000018558	tdrd1	90	35.138	ENSRROG00000043379	TDRD1	81	35.138	Rhinopithecus_roxellana
ENSKMAG00000018558	tdrd1	91	34.959	ENSSBOG00000023561	TDRD1	80	36.081	Saimiri_boliviensis_boliviensis
ENSKMAG00000018558	tdrd1	93	32.101	ENSSHAG00000014311	TDRD1	83	32.101	Sarcophilus_harrisii
ENSKMAG00000018558	tdrd1	97	41.515	ENSSFOG00015022020	tdrd1	95	41.515	Scleropages_formosus
ENSKMAG00000018558	tdrd1	93	64.759	ENSSMAG00000019271	tdrd1	87	64.759	Scophthalmus_maximus
ENSKMAG00000018558	tdrd1	93	67.341	ENSSDUG00000022012	tdrd1	90	67.341	Seriola_dumerili
ENSKMAG00000018558	tdrd1	93	67.206	ENSSLDG00000006423	tdrd1	91	67.206	Seriola_lalandi_dorsalis
ENSKMAG00000018558	tdrd1	89	37.782	ENSSARG00000008828	TDRD1	65	37.782	Sorex_araneus
ENSKMAG00000018558	tdrd1	90	33.628	ENSSPUG00000005015	TDRD1	83	33.628	Sphenodon_punctatus
ENSKMAG00000018558	tdrd1	97	63.305	ENSSPAG00000018805	tdrd1	92	63.305	Stegastes_partitus
ENSKMAG00000018558	tdrd1	94	35.563	ENSSSCG00000021075	TDRD1	83	35.563	Sus_scrofa
ENSKMAG00000018558	tdrd1	85	34.802	ENSTGUG00000010905	TDRD1	94	34.802	Taeniopygia_guttata
ENSKMAG00000018558	tdrd1	99	54.767	ENSTRUG00000012142	tdrd1	93	55.026	Takifugu_rubripes
ENSKMAG00000018558	tdrd1	87	52.256	ENSTNIG00000018898	tdrd1	100	52.632	Tetraodon_nigroviridis
ENSKMAG00000018558	tdrd1	92	34.323	ENSTBEG00000014417	-	82	32.186	Tupaia_belangeri
ENSKMAG00000018558	tdrd1	91	33.401	ENSTTRG00000010147	TDRD1	81	33.401	Tursiops_truncatus
ENSKMAG00000018558	tdrd1	90	34.238	ENSUAMG00000009025	TDRD1	82	34.238	Ursus_americanus
ENSKMAG00000018558	tdrd1	90	34.213	ENSUMAG00000000705	TDRD1	81	35.288	Ursus_maritimus
ENSKMAG00000018558	tdrd1	87	35.141	ENSVPAG00000004000	TDRD1	79	35.141	Vicugna_pacos
ENSKMAG00000018558	tdrd1	93	33.268	ENSVVUG00000009750	TDRD1	83	33.268	Vulpes_vulpes
ENSKMAG00000018558	tdrd1	94	61.921	ENSXCOG00000006412	tdrd1	98	61.921	Xiphophorus_couchianus
ENSKMAG00000018558	tdrd1	99	61.785	ENSXMAG00000008104	tdrd1	94	61.239	Xiphophorus_maculatus