EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSKMAG00000018748 (Gene tree)
Gene ID
108245444
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Minus strand
Length
10169 bases
Position
chrLWHD01000173.1:847946-858114
Accession
108245444
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000025314RRM_1PF00076.222.1e-1711
ENSKMAP00000025299RRM_1PF00076.223.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000025634-857XM_017432362ENSKMAP00000025314233 (aa)XP_017287851UPI0007F87022
ENSKMAT00000025619-1787XM_017432360ENSKMAP00000025299285 (aa)XP_017287849UPI0007F86532
Gene Model
Click here to download ENSKMAG00000018748's gene model file
Pathways
Pathway IDPathway NameSource
kmr03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018748's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000018748pabpn18681.643ENSG00000100836PABPN19481.065Homo_sapiens
ENSKMAG00000018748pabpn18183.246ENSG00000258643BCL2L2-PABPN15783.246Homo_sapiens
ENSKMAG00000018748pabpn110097.544ENSAPOG00000016425pabpn110097.544Acanthochromis_polyacanthus
ENSKMAG00000018748pabpn18183.246ENSAMEG00000007048BCL2L2-PABPN110083.246Ailuropoda_melanoleuca
ENSKMAG00000018748pabpn110096.167ENSACIG00000021744pabpn110097.740Amphilophus_citrinellus
ENSKMAG00000018748pabpn110096.996ENSAOCG00000015805pabpn110096.996Amphiprion_ocellaris
ENSKMAG00000018748pabpn110096.996ENSAPEG00000009623pabpn110096.996Amphiprion_percula
ENSKMAG00000018748pabpn110097.425ENSATEG00000020531pabpn110097.425Anabas_testudineus
ENSKMAG00000018748pabpn18185.864ENSACAG00000006185-7480.569Anolis_carolinensis
ENSKMAG00000018748pabpn18582.090ENSANAG00000024513-8475.000Aotus_nancymaae
ENSKMAG00000018748pabpn110095.833ENSACLG00000016374pabpn110095.833Astatotilapia_calliptera
ENSKMAG00000018748pabpn110096.581ENSAMXG00000000452pabpn110096.581Astyanax_mexicanus
ENSKMAG00000018748pabpn18482.915ENSBTAG00000006884PABPN18668.561Bos_taurus
ENSKMAG00000018748pabpn18476.142ENSBTAG00000050594-8177.184Bos_taurus
ENSKMAG00000018748pabpn18282.383ENSBTAG00000053753-7182.383Bos_taurus
ENSKMAG00000018748pabpn16158.904WBGene00003904pabp-28554.857Caenorhabditis_elegans
ENSKMAG00000018748pabpn19975.214ENSCJAG00000007960-8475.641Callithrix_jacchus
ENSKMAG00000018748pabpn17179.290ENSCJAG00000004407-8479.290Callithrix_jacchus
ENSKMAG00000018748pabpn18681.643ENSCAFG00000011482PABPN18670.076Canis_familiaris
ENSKMAG00000018748pabpn18681.643ENSCAFG00020007298-6881.429Canis_lupus_dingo
ENSKMAG00000018748pabpn18681.643ENSCAFG00020006651-6881.429Canis_lupus_dingo
ENSKMAG00000018748pabpn18681.643ENSCHIG00000012184PABPN16881.429Capra_hircus
ENSKMAG00000018748pabpn18183.246ENSTSYG00000033996BCL2L2-PABPN19481.065Carlito_syrichta
ENSKMAG00000018748pabpn15783.582ENSCAPG00000009461-9683.582Cavia_aperea
ENSKMAG00000018748pabpn18681.159ENSCPOG00000025574PABPN16880.952Cavia_porcellus
ENSKMAG00000018748pabpn19975.214ENSCCAG00000033954BCL2L2-PABPN18475.641Cebus_capucinus
ENSKMAG00000018748pabpn19975.214ENSCATG00000038536BCL2L2-PABPN18475.641Cercocebus_atys
ENSKMAG00000018748pabpn16580.921ENSCLAG00000012423PABPN15680.921Chinchilla_lanigera
ENSKMAG00000018748pabpn18680.193ENSCSAG00000016036PABPN18668.561Chlorocebus_sabaeus
ENSKMAG00000018748pabpn18972.038ENSCHOG00000004798BCL2L2-PABPN18872.038Choloepus_hoffmanni
ENSKMAG00000018748pabpn17182.840ENSCPBG00000026060-9482.840Chrysemys_picta_bellii
ENSKMAG00000018748pabpn19062.264ENSCING00000012468-8962.264Ciona_intestinalis
ENSKMAG00000018748pabpn17665.556ENSCSAVG00000002001-9361.310Ciona_savignyi
ENSKMAG00000018748pabpn18570.352ENSCANG00000030980-8763.180Colobus_angolensis_palliatus
ENSKMAG00000018748pabpn18183.246ENSCANG00000009750BCL2L2-PABPN19481.065Colobus_angolensis_palliatus
ENSKMAG00000018748pabpn18681.159ENSCGRG00001019696Pabpn19480.473Cricetulus_griseus_chok1gshd
ENSKMAG00000018748pabpn16290.476ENSCGRG00000011102Pabpn19190.476Cricetulus_griseus_crigri
ENSKMAG00000018748pabpn110095.708ENSCSEG00000008774pabpn110095.279Cynoglossus_semilaevis
ENSKMAG00000018748pabpn110092.340ENSCVAG00000003152pabpn110094.043Cyprinodon_variegatus
ENSKMAG00000018748pabpn110095.708ENSDARG00000045373pabpn110096.330Danio_rerio
ENSKMAG00000018748pabpn16360.667ENSDARG00000087996pabpn1l7964.844Danio_rerio
ENSKMAG00000018748pabpn18681.643ENSDNOG00000023682PABPN16881.429Dasypus_novemcinctus
ENSKMAG00000018748pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSKMAG00000018748pabpn18680.676ENSDORG00000028966-6880.476Dipodomys_ordii
ENSKMAG00000018748pabpn19757.940FBgn0005648Pabp29759.910Drosophila_melanogaster
ENSKMAG00000018748pabpn19973.391ENSEBUG00000002322pabpn19973.391Eptatretus_burgeri
ENSKMAG00000018748pabpn18681.643ENSEASG00005011716PABPN16881.429Equus_asinus_asinus
ENSKMAG00000018748pabpn18580.976ENSECAG00000011652PABPN16781.407Equus_caballus
ENSKMAG00000018748pabpn18679.227ENSEEUG00000012973-6880.402Erinaceus_europaeus
ENSKMAG00000018748pabpn110091.176ENSELUG00000022654pabpn110092.857Esox_lucius
ENSKMAG00000018748pabpn18681.643ENSFCAG00000031922PABPN16881.429Felis_catus
ENSKMAG00000018748pabpn17181.065ENSFDAG00000018381BCL2L2-PABPN19481.065Fukomys_damarensis
ENSKMAG00000018748pabpn110095.708ENSFHEG00000007215pabpn110095.708Fundulus_heteroclitus
ENSKMAG00000018748pabpn110093.357ENSGMOG00000003922pabpn110093.706Gadus_morhua
ENSKMAG00000018748pabpn18380.905ENSGALG00000052930-6182.075Gallus_gallus
ENSKMAG00000018748pabpn110097.872ENSGAFG00000017099pabpn110097.872Gambusia_affinis
ENSKMAG00000018748pabpn110096.140ENSGACG00000002167pabpn110096.140Gasterosteus_aculeatus
ENSKMAG00000018748pabpn18770.335ENSGGOG00000025919-9868.000Gorilla_gorilla
ENSKMAG00000018748pabpn18968.900ENSGGOG00000039675-9164.730Gorilla_gorilla
ENSKMAG00000018748pabpn19975.214ENSGGOG00000022683-8475.641Gorilla_gorilla
ENSKMAG00000018748pabpn110097.425ENSHBUG00000019523pabpn110097.425Haplochromis_burtoni
ENSKMAG00000018748pabpn18681.159ENSHGLG00000002927-9290.476Heterocephalus_glaber_female
ENSKMAG00000018748pabpn18769.712ENSHGLG00000018588-6974.332Heterocephalus_glaber_female
ENSKMAG00000018748pabpn17162.500ENSHGLG00000009842-9362.500Heterocephalus_glaber_female
ENSKMAG00000018748pabpn17384.971ENSHGLG00100006673-9290.476Heterocephalus_glaber_male
ENSKMAG00000018748pabpn18769.712ENSHGLG00100015565-8761.847Heterocephalus_glaber_male
ENSKMAG00000018748pabpn17169.767ENSHGLG00100018935-9472.254Heterocephalus_glaber_male
ENSKMAG00000018748pabpn110096.137ENSHCOG00000004655pabpn110096.137Hippocampus_comes
ENSKMAG00000018748pabpn110085.408ENSIPUG00000000180-9987.124Ictalurus_punctatus
ENSKMAG00000018748pabpn110093.133ENSIPUG00000008085PABPN110094.850Ictalurus_punctatus
ENSKMAG00000018748pabpn17181.065ENSSTOG00000029847BCL2L2-PABPN19481.065Ictidomys_tridecemlineatus
ENSKMAG00000018748pabpn17181.065ENSJJAG00000023507Gm205219481.065Jaculus_jaculus
ENSKMAG00000018748pabpn110097.544ENSLBEG00000027266pabpn110097.544Labrus_bergylta
ENSKMAG00000018748pabpn17687.151ENSLACG00000000646pabpn19476.471Latimeria_chalumnae
ENSKMAG00000018748pabpn19064.651ENSLOCG00000004694pabpn1l9966.047Lepisosteus_oculatus
ENSKMAG00000018748pabpn110090.909ENSLOCG00000000796pabpn110091.259Lepisosteus_oculatus
ENSKMAG00000018748pabpn16581.579ENSLAFG00000031227-9981.579Loxodonta_africana
ENSKMAG00000018748pabpn16173.427ENSMFAG00000031355-9973.427Macaca_fascicularis
ENSKMAG00000018748pabpn18183.246ENSMFAG00000032183BCL2L2-PABPN19481.065Macaca_fascicularis
ENSKMAG00000018748pabpn18183.246ENSMMUG00000014747BCL2L2-PABPN110081.081Macaca_mulatta
ENSKMAG00000018748pabpn18667.476ENSMMUG00000048382-6967.773Macaca_mulatta
ENSKMAG00000018748pabpn17968.085ENSMNEG00000035750-9973.427Macaca_nemestrina
ENSKMAG00000018748pabpn19975.214ENSMNEG00000045065BCL2L2-PABPN18475.641Macaca_nemestrina
ENSKMAG00000018748pabpn18183.246ENSMLEG00000043862BCL2L2-PABPN19481.065Mandrillus_leucophaeus
ENSKMAG00000018748pabpn17265.476ENSMLEG00000034623-9971.329Mandrillus_leucophaeus
ENSKMAG00000018748pabpn110096.140ENSMAMG00000007979pabpn110096.140Mastacembelus_armatus
ENSKMAG00000018748pabpn110097.544ENSMZEG00005011904pabpn110097.544Maylandia_zebra
ENSKMAG00000018748pabpn18681.159ENSMAUG00000007383Gm205217080.952Mesocricetus_auratus
ENSKMAG00000018748pabpn19975.641ENSMICG00000010002BCL2L2-PABPN18475.641Microcebus_murinus
ENSKMAG00000018748pabpn18680.676ENSMOCG00000018557Gm205219090.476Microtus_ochrogaster
ENSKMAG00000018748pabpn110097.895ENSMMOG00000005405pabpn110097.895Mola_mola
ENSKMAG00000018748pabpn18578.818ENSMODG00000004535-6681.095Monodelphis_domestica
ENSKMAG00000018748pabpn110097.193ENSMALG00000019612pabpn110097.193Monopterus_albus
ENSKMAG00000018748pabpn18182.199MGP_CAROLIEiJ_G0019276Gm205215782.199Mus_caroli
ENSKMAG00000018748pabpn18680.676MGP_CAROLIEiJ_G0019277Pabpn18991.096Mus_caroli
ENSKMAG00000018748pabpn18681.159ENSMUSG00000022194Pabpn18991.096Mus_musculus
ENSKMAG00000018748pabpn18182.723ENSMUSG00000092232Gm205215782.723Mus_musculus
ENSKMAG00000018748pabpn18182.723MGP_PahariEiJ_G0030294Gm205215782.723Mus_pahari
ENSKMAG00000018748pabpn18681.159MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSKMAG00000018748pabpn18182.723MGP_SPRETEiJ_G0020165Gm205215782.723Mus_spretus
ENSKMAG00000018748pabpn18681.159MGP_SPRETEiJ_G0020166Pabpn18991.096Mus_spretus
ENSKMAG00000018748pabpn16383.444ENSMPUG00000006775-9280.892Mustela_putorius_furo
ENSKMAG00000018748pabpn18480.402ENSMLUG00000028677-8274.667Myotis_lucifugus
ENSKMAG00000018748pabpn18182.199ENSMLUG00000003800-10082.199Myotis_lucifugus
ENSKMAG00000018748pabpn18878.571ENSMLUG00000012452-6978.571Myotis_lucifugus
ENSKMAG00000018748pabpn18183.246ENSNGAG00000019529Gm205215783.246Nannospalax_galili
ENSKMAG00000018748pabpn110097.895ENSNBRG00000023955pabpn110097.895Neolamprologus_brichardi
ENSKMAG00000018748pabpn18668.447ENSNLEG00000030598-7767.464Nomascus_leucogenys
ENSKMAG00000018748pabpn16459.732ENSNLEG00000035292-9959.732Nomascus_leucogenys
ENSKMAG00000018748pabpn18681.643ENSNLEG00000015007-7481.429Nomascus_leucogenys
ENSKMAG00000018748pabpn18681.159ENSODEG00000002083BCL2L2-PABPN16880.952Octodon_degus
ENSKMAG00000018748pabpn17671.667ENSODEG00000011555-8970.414Octodon_degus
ENSKMAG00000018748pabpn18673.039ENSODEG00000003739-6872.727Octodon_degus
ENSKMAG00000018748pabpn110097.895ENSONIG00000008112pabpn110097.895Oreochromis_niloticus
ENSKMAG00000018748pabpn16383.108ENSOANG00000009218-10083.108Ornithorhynchus_anatinus
ENSKMAG00000018748pabpn18681.159ENSOCUG00000016174PABPN17680.952Oryctolagus_cuniculus
ENSKMAG00000018748pabpn110097.895ENSORLG00000027900pabpn110097.895Oryzias_latipes
ENSKMAG00000018748pabpn19997.826ENSORLG00020004681pabpn110095.222Oryzias_latipes_hni
ENSKMAG00000018748pabpn110098.283ENSORLG00015000018pabpn110098.283Oryzias_latipes_hsok
ENSKMAG00000018748pabpn110097.895ENSOMEG00000016618pabpn110097.895Oryzias_melastigma
ENSKMAG00000018748pabpn18681.643ENSOGAG00000008710PABPN16881.429Otolemur_garnettii
ENSKMAG00000018748pabpn18183.246ENSOARG00000019336BCL2L2-PABPN15283.246Ovis_aries
ENSKMAG00000018748pabpn17166.467ENSPPAG00000039421-9366.467Pan_paniscus
ENSKMAG00000018748pabpn18183.246ENSPPAG00000028984BCL2L2-PABPN19280.892Pan_paniscus
ENSKMAG00000018748pabpn18681.643ENSPPRG00000010567PABPN16881.429Panthera_pardus
ENSKMAG00000018748pabpn17181.065ENSPTIG00000001063BCL2L2-PABPN19481.065Panthera_tigris_altaica
ENSKMAG00000018748pabpn19975.214ENSPTRG00000006167BCL2L28475.641Pan_troglodytes
ENSKMAG00000018748pabpn110062.553ENSPTRG00000047273-9359.684Pan_troglodytes
ENSKMAG00000018748pabpn18468.844ENSPANG00000023326-9974.126Papio_anubis
ENSKMAG00000018748pabpn19975.214ENSPANG00000021100BCL2L2-PABPN18475.641Papio_anubis
ENSKMAG00000018748pabpn17070.122ENSPKIG00000008340pabpn1l8867.778Paramormyrops_kingsleyae
ENSKMAG00000018748pabpn110091.453ENSPKIG00000018052pabpn110094.017Paramormyrops_kingsleyae
ENSKMAG00000018748pabpn110094.737ENSPKIG00000008144-10094.737Paramormyrops_kingsleyae
ENSKMAG00000018748pabpn110091.930ENSPMGG00000022027pabpn110091.930Periophthalmus_magnuspinnatus
ENSKMAG00000018748pabpn18681.159ENSPEMG00000008332Gm205218990.476Peromyscus_maniculatus_bairdii
ENSKMAG00000018748pabpn17975.269ENSPMAG00000006212pabpn19969.547Petromyzon_marinus
ENSKMAG00000018748pabpn18679.612ENSPCIG00000027751-6880.952Phascolarctos_cinereus
ENSKMAG00000018748pabpn110096.596ENSPFOG00000010351pabpn19996.596Poecilia_formosa
ENSKMAG00000018748pabpn110097.561ENSPLAG00000022696pabpn110097.561Poecilia_latipinna
ENSKMAG00000018748pabpn110096.596ENSPMEG00000020856pabpn110096.596Poecilia_mexicana
ENSKMAG00000018748pabpn110097.213ENSPREG00000011278pabpn110097.213Poecilia_reticulata
ENSKMAG00000018748pabpn17883.598ENSPPYG00000005663PABPN17081.313Pongo_abelii
ENSKMAG00000018748pabpn17869.110ENSPCAG00000005902PABPN16669.072Procavia_capensis
ENSKMAG00000018748pabpn19975.641ENSPCOG00000028047BCL2L2-PABPN18475.641Propithecus_coquereli
ENSKMAG00000018748pabpn18880.476ENSPVAG00000005270PABPN16880.000Pteropus_vampyrus
ENSKMAG00000018748pabpn110097.425ENSPNYG00000013182pabpn110097.425Pundamilia_nyererei
ENSKMAG00000018748pabpn110096.567ENSPNAG00000023526pabpn110096.567Pygocentrus_nattereri
ENSKMAG00000018748pabpn18858.654ENSPNAG00000021666pabpn1l8470.175Pygocentrus_nattereri
ENSKMAG00000018748pabpn18681.159ENSRNOG00000042195Pabpn16980.952Rattus_norvegicus
ENSKMAG00000018748pabpn17385.549ENSRBIG00000040762BCL2L2-PABPN15485.549Rhinopithecus_bieti
ENSKMAG00000018748pabpn18871.429ENSRBIG00000042811-9567.105Rhinopithecus_bieti
ENSKMAG00000018748pabpn18970.892ENSRBIG00000039547-7769.048Rhinopithecus_bieti
ENSKMAG00000018748pabpn18866.981ENSRROG00000036409-8357.519Rhinopithecus_roxellana
ENSKMAG00000018748pabpn17385.549ENSRROG00000045535BCL2L2-PABPN19481.065Rhinopithecus_roxellana
ENSKMAG00000018748pabpn18871.635ENSRROG00000040409-7769.524Rhinopithecus_roxellana
ENSKMAG00000018748pabpn18177.941ENSSBOG00000026930BCL2L2-PABPN19280.892Saimiri_boliviensis_boliviensis
ENSKMAG00000018748pabpn19960.669ENSSHAG00000007707-9558.333Sarcophilus_harrisii
ENSKMAG00000018748pabpn18181.053ENSSHAG00000014841-8782.723Sarcophilus_harrisii
ENSKMAG00000018748pabpn110093.133ENSSFOG00015014718pabpn110094.850Scleropages_formosus
ENSKMAG00000018748pabpn110088.462ENSSFOG00015012565pabpn110088.462Scleropages_formosus
ENSKMAG00000018748pabpn17661.224ENSSFOG00015015833pabpn1l8465.761Scleropages_formosus
ENSKMAG00000018748pabpn110097.193ENSSMAG00000020157pabpn110097.193Scophthalmus_maximus
ENSKMAG00000018748pabpn110097.544ENSSDUG00000020582pabpn110097.544Seriola_dumerili
ENSKMAG00000018748pabpn110097.425ENSSLDG00000007118pabpn110097.425Seriola_lalandi_dorsalis
ENSKMAG00000018748pabpn17183.432ENSSPUG00000018308-9483.432Sphenodon_punctatus
ENSKMAG00000018748pabpn110097.203ENSSPAG00000021658pabpn110097.203Stegastes_partitus
ENSKMAG00000018748pabpn18863.208ENSSSCG00000034805-7958.962Sus_scrofa
ENSKMAG00000018748pabpn18681.643ENSSSCG00000002023PABPN16881.429Sus_scrofa
ENSKMAG00000018748pabpn110096.140ENSTRUG00000023664pabpn110096.140Takifugu_rubripes
ENSKMAG00000018748pabpn19291.667ENSTNIG00000005369pabpn110089.767Tetraodon_nigroviridis
ENSKMAG00000018748pabpn18681.643ENSUAMG00000024460PABPN18369.412Ursus_americanus
ENSKMAG00000018748pabpn18183.246ENSUMAG00000014288BCL2L2-PABPN15783.246Ursus_maritimus
ENSKMAG00000018748pabpn18183.246ENSVVUG00000019912BCL2L2-PABPN17682.051Vulpes_vulpes
ENSKMAG00000018748pabpn18484.772ENSXETG00000014597pabpn17380.645Xenopus_tropicalis
ENSKMAG00000018748pabpn17585.227ENSXCOG00000005158pabpn19885.227Xiphophorus_couchianus
ENSKMAG00000018748pabpn110097.447ENSXMAG00000006196pabpn110097.447Xiphophorus_maculatus

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