EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000018789 (Gene tree)
Gene ID: 108242672
Gene Symbol: -
Alias: si:dkey-109n11.2
Full Name: uncharacterized LOC108242672
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4161 bases
Position: chrLWHD01000104.1:119109-123269
Accession: 108242672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	1	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	2	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	3	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	4	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	5	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	6	7
ENSKMAP00000025350	zf-C2H2	PF00096.26	1.1e-36	7	7
ENSKMAP00000025350	zf-met	PF12874.7	1.3e-07	1	2
ENSKMAP00000025350	zf-met	PF12874.7	1.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025670	-	4161	XM_017427664	ENSKMAP00000025350	1386 (aa)	XP_017283153	UPI0007F88341

Gene Model

Click here to download ENSKMAG00000018789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018789	-	62	87.659	ENSAPOG00000014819	-	63	87.774	Acanthochromis_polyacanthus
ENSKMAG00000018789	-	61	87.611	ENSAOCG00000022926	-	95	95.364	Amphiprion_ocellaris
ENSKMAG00000018789	-	98	77.076	ENSCSEG00000016863	-	63	75.870	Cynoglossus_semilaevis
ENSKMAG00000018789	-	100	83.980	ENSCVAG00000022101	-	65	86.719	Cyprinodon_variegatus
ENSKMAG00000018789	-	100	85.684	ENSFHEG00000001706	-	65	86.674	Fundulus_heteroclitus
ENSKMAG00000018789	-	99	70.875	ENSHCOG00000018630	-	63	69.978	Hippocampus_comes
ENSKMAG00000018789	-	61	82.811	ENSMMOG00000013085	-	63	82.775	Mola_mola
ENSKMAG00000018789	-	100	81.445	ENSONIG00000007045	-	100	93.264	Oreochromis_niloticus
ENSKMAG00000018789	-	100	78.978	ENSORLG00015019057	-	65	80.067	Oryzias_latipes_hsok
ENSKMAG00000018789	-	88	49.961	ENSPKIG00000012449	si:dkeyp-69b9.6	58	64.796	Paramormyrops_kingsleyae
ENSKMAG00000018789	-	97	83.950	ENSPFOG00000007425	-	63	85.514	Poecilia_formosa
ENSKMAG00000018789	-	100	84.382	ENSPLAG00000013476	-	65	84.875	Poecilia_latipinna
ENSKMAG00000018789	-	100	82.281	ENSPMEG00000010070	-	64	82.071	Poecilia_mexicana
ENSKMAG00000018789	-	66	70.874	ENSSFOG00015000866	si:dkeyp-69b9.6	59	68.153	Scleropages_formosus
ENSKMAG00000018789	-	64	81.628	ENSSMAG00000016019	-	65	81.848	Scophthalmus_maximus
ENSKMAG00000018789	-	61	90.164	ENSSPAG00000001452	-	99	95.364	Stegastes_partitus