EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018802 (Gene tree)
Gene ID: 108242081
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 10141 bases
Position: chrLWHD01000094.1:659775-669915
Accession: 108242081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025374	zf-RNPHF	PF08080.12	2.5e-08	1	1
ENSKMAP00000025393	zf-RNPHF	PF08080.12	3.4e-08	1	1
ENSKMAP00000025374	RRM_1	PF00076.22	1.1e-30	1	3
ENSKMAP00000025374	RRM_1	PF00076.22	1.1e-30	2	3
ENSKMAP00000025374	RRM_1	PF00076.22	1.1e-30	3	3
ENSKMAP00000025393	RRM_1	PF00076.22	1.2e-30	1	3
ENSKMAP00000025393	RRM_1	PF00076.22	1.2e-30	2	3
ENSKMAP00000025393	RRM_1	PF00076.22	1.2e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025713	-	1714	-	ENSKMAP00000025393	419 (aa)	-	-
ENSKMAT00000025694	-	5535	XM_017426686	ENSKMAP00000025374	409 (aa)	XP_017282175	UPI0007F86B7D

Gene Model

Click here to download ENSKMAG00000018802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018802	hnrnph1	82	59.079	ENSKMAG00000020517	hnrnph3	97	58.098
ENSKMAG00000018802	hnrnph1	80	44.012	ENSKMAG00000004528	grsf1	74	44.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018802	hnrnph1	100	95.854	ENSAPOG00000016614	hnrnph1	100	95.854	Acanthochromis_polyacanthus
ENSKMAG00000018802	hnrnph1	99	94.987	ENSACIG00000008964	hnrnph1	98	94.987	Amphilophus_citrinellus
ENSKMAG00000018802	hnrnph1	100	96.341	ENSAOCG00000008372	hnrnph1	100	96.341	Amphiprion_ocellaris
ENSKMAG00000018802	hnrnph1	100	96.098	ENSAPEG00000012980	hnrnph1	100	96.098	Amphiprion_percula
ENSKMAG00000018802	hnrnph1	100	96.098	ENSATEG00000002792	hnrnph1	100	96.098	Anabas_testudineus
ENSKMAG00000018802	hnrnph1	99	70.796	ENSACAG00000016323	-	95	72.414	Anolis_carolinensis
ENSKMAG00000018802	hnrnph1	84	91.573	ENSACLG00000003313	hnrnph1	97	91.011	Astatotilapia_calliptera
ENSKMAG00000018802	hnrnph1	99	81.707	ENSAMXG00000030703	hnrnph1l	84	81.463	Astyanax_mexicanus
ENSKMAG00000018802	hnrnph1	100	82.169	ENSAMXG00000002483	hnrnph1	99	86.911	Astyanax_mexicanus
ENSKMAG00000018802	hnrnph1	100	91.505	ENSCSEG00000015891	hnrnph1	100	92.961	Cynoglossus_semilaevis
ENSKMAG00000018802	hnrnph1	100	93.888	ENSCVAG00000014097	hnrnph1	100	94.132	Cyprinodon_variegatus
ENSKMAG00000018802	hnrnph1	95	86.224	ENSDARG00000005551	hnrnph1l	99	84.146	Danio_rerio
ENSKMAG00000018802	hnrnph1	93	86.387	ENSDARG00000040881	hnrnph1	96	86.352	Danio_rerio
ENSKMAG00000018802	hnrnph1	96	83.812	ENSELUG00000021437	-	99	85.640	Esox_lucius
ENSKMAG00000018802	hnrnph1	100	86.525	ENSELUG00000006715	hnrnph1	99	84.597	Esox_lucius
ENSKMAG00000018802	hnrnph1	100	92.665	ENSFHEG00000008474	hnrnph1	100	91.687	Fundulus_heteroclitus
ENSKMAG00000018802	hnrnph1	96	88.041	ENSGMOG00000006782	hnrnph1	98	86.869	Gadus_morhua
ENSKMAG00000018802	hnrnph1	100	95.110	ENSGAFG00000006280	hnrnph1	100	95.355	Gambusia_affinis
ENSKMAG00000018802	hnrnph1	100	90.000	ENSGACG00000018352	hnrnph1	99	89.639	Gasterosteus_aculeatus
ENSKMAG00000018802	hnrnph1	84	91.573	ENSHBUG00000010547	hnrnph1	98	91.011	Haplochromis_burtoni
ENSKMAG00000018802	hnrnph1	100	84.798	ENSHCOG00000004513	hnrnph1	100	88.361	Hippocampus_comes
ENSKMAG00000018802	hnrnph1	95	82.143	ENSIPUG00000024047	hnrnph1l	98	78.606	Ictalurus_punctatus
ENSKMAG00000018802	hnrnph1	100	81.446	ENSIPUG00000018262	hnrnph1	100	82.892	Ictalurus_punctatus
ENSKMAG00000018802	hnrnph1	100	93.415	ENSLBEG00000027811	hnrnph1	100	94.634	Labrus_bergylta
ENSKMAG00000018802	hnrnph1	98	76.027	ENSLOCG00000012510	hnrnph1	91	80.397	Lepisosteus_oculatus
ENSKMAG00000018802	hnrnph1	99	54.378	ENSMMUG00000017392	-	83	56.793	Macaca_mulatta
ENSKMAG00000018802	hnrnph1	99	54.110	ENSMNEG00000030544	-	83	56.793	Macaca_nemestrina
ENSKMAG00000018802	hnrnph1	86	88.172	ENSMAMG00000011478	hnrnph1	99	88.441	Mastacembelus_armatus
ENSKMAG00000018802	hnrnph1	100	96.088	ENSMZEG00005009791	hnrnph1	100	96.088	Maylandia_zebra
ENSKMAG00000018802	hnrnph1	93	93.947	ENSMMOG00000009064	hnrnph1	98	93.421	Mola_mola
ENSKMAG00000018802	hnrnph1	74	51.652	ENSMODG00000002200	-	99	51.351	Monodelphis_domestica
ENSKMAG00000018802	hnrnph1	85	90.556	ENSMALG00000003999	hnrnph1	99	90.556	Monopterus_albus
ENSKMAG00000018802	hnrnph1	84	91.573	ENSNBRG00000015406	hnrnph1	98	91.011	Neolamprologus_brichardi
ENSKMAG00000018802	hnrnph1	100	96.088	ENSONIG00000017754	hnrnph1	100	96.088	Oreochromis_niloticus
ENSKMAG00000018802	hnrnph1	100	93.947	ENSORLG00000006932	hnrnph1	100	94.915	Oryzias_latipes
ENSKMAG00000018802	hnrnph1	100	93.947	ENSORLG00020007881	hnrnph1	100	94.915	Oryzias_latipes_hni
ENSKMAG00000018802	hnrnph1	100	93.947	ENSORLG00015005306	hnrnph1	100	94.915	Oryzias_latipes_hsok
ENSKMAG00000018802	hnrnph1	100	94.146	ENSOMEG00000009827	hnrnph1	100	95.366	Oryzias_melastigma
ENSKMAG00000018802	hnrnph1	100	86.408	ENSPKIG00000018203	hnrnph1l	100	84.951	Paramormyrops_kingsleyae
ENSKMAG00000018802	hnrnph1	93	81.886	ENSPKIG00000009532	-	93	81.095	Paramormyrops_kingsleyae
ENSKMAG00000018802	hnrnph1	100	90.732	ENSPMGG00000012151	hnrnph1	100	91.951	Periophthalmus_magnuspinnatus
ENSKMAG00000018802	hnrnph1	100	95.110	ENSPFOG00000004097	hnrnph1	100	95.355	Poecilia_formosa
ENSKMAG00000018802	hnrnph1	100	95.110	ENSPLAG00000011771	hnrnph1	100	95.355	Poecilia_latipinna
ENSKMAG00000018802	hnrnph1	100	96.088	ENSPMEG00000019446	hnrnph1	100	96.088	Poecilia_mexicana
ENSKMAG00000018802	hnrnph1	100	96.088	ENSPREG00000005780	hnrnph1	100	96.088	Poecilia_reticulata
ENSKMAG00000018802	hnrnph1	100	96.088	ENSPNYG00000000204	hnrnph1	100	96.088	Pundamilia_nyererei
ENSKMAG00000018802	hnrnph1	99	82.282	ENSPNAG00000002784	hnrnph1l	98	82.913	Pygocentrus_nattereri
ENSKMAG00000018802	hnrnph1	100	82.410	ENSPNAG00000000439	hnrnph1	98	86.822	Pygocentrus_nattereri
ENSKMAG00000018802	hnrnph1	95	86.514	ENSSFOG00015016055	-	94	86.979	Scleropages_formosus
ENSKMAG00000018802	hnrnph1	97	88.471	ENSSFOG00015022796	hnrnph1l	100	85.507	Scleropages_formosus
ENSKMAG00000018802	hnrnph1	96	90.932	ENSSMAG00000007820	hnrnph1	97	92.468	Scophthalmus_maximus
ENSKMAG00000018802	hnrnph1	100	96.341	ENSSDUG00000008785	hnrnph1	100	96.341	Seriola_dumerili
ENSKMAG00000018802	hnrnph1	100	96.341	ENSSLDG00000010685	hnrnph1	100	96.341	Seriola_lalandi_dorsalis
ENSKMAG00000018802	hnrnph1	100	94.390	ENSSPAG00000009921	hnrnph1	100	94.878	Stegastes_partitus
ENSKMAG00000018802	hnrnph1	100	93.888	ENSTRUG00000020069	hnrnph1	100	94.132	Takifugu_rubripes
ENSKMAG00000018802	hnrnph1	99	71.493	ENSXETG00000018321	hnrnph1	85	78.820	Xenopus_tropicalis
ENSKMAG00000018802	hnrnph1	93	92.327	ENSXCOG00000009133	hnrnph1	98	90.380	Xiphophorus_couchianus
ENSKMAG00000018802	hnrnph1	93	95.778	ENSXMAG00000021332	hnrnph1	99	95.778	Xiphophorus_maculatus