EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018826 (Gene tree)
Gene ID: 108233444
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14029 bases
Position: chrLWHD01000021.1:1886789-1900817
Accession: 108233444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025468	RRM_1	PF00076.22	2.7e-09	1	1
ENSKMAP00000025444	RRM_1	PF00076.22	2.9e-09	1	1
ENSKMAP00000025444	PWI	PF01480.17	3.2e-13	1	1
ENSKMAP00000025468	PWI	PF01480.17	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025764	-	5514	XM_017411911	ENSKMAP00000025444	814 (aa)	XP_017267400	UPI0007F886E2
ENSKMAT00000025787	-	2346	-	ENSKMAP00000025468	781 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000018826's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018826	rbm25b	60	72.024	ENSKMAG00000016242	rbm25a	57	82.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018826	rbm25b	52	74.334	ENSG00000119707	RBM25	100	65.354	Homo_sapiens
ENSKMAG00000018826	rbm25b	57	92.505	ENSAPOG00000015321	rbm25b	56	92.952	Acanthochromis_polyacanthus
ENSKMAG00000018826	rbm25b	55	78.821	ENSAPOG00000017757	rbm25a	56	78.065	Acanthochromis_polyacanthus
ENSKMAG00000018826	rbm25b	52	74.334	ENSAMEG00000016270	RBM25	51	74.359	Ailuropoda_melanoleuca
ENSKMAG00000018826	rbm25b	57	88.009	ENSACIG00000014178	rbm25b	55	87.225	Amphilophus_citrinellus
ENSKMAG00000018826	rbm25b	55	77.533	ENSACIG00000019482	rbm25a	55	76.026	Amphilophus_citrinellus
ENSKMAG00000018826	rbm25b	55	76.264	ENSAOCG00000013695	rbm25a	54	76.027	Amphiprion_ocellaris
ENSKMAG00000018826	rbm25b	58	87.261	ENSAOCG00000019308	rbm25b	55	87.665	Amphiprion_ocellaris
ENSKMAG00000018826	rbm25b	55	78.525	ENSAPEG00000007514	rbm25a	56	77.516	Amphiprion_percula
ENSKMAG00000018826	rbm25b	58	90.756	ENSAPEG00000009666	rbm25b	58	90.749	Amphiprion_percula
ENSKMAG00000018826	rbm25b	58	90.870	ENSATEG00000017312	rbm25b	56	91.048	Anabas_testudineus
ENSKMAG00000018826	rbm25b	57	77.801	ENSATEG00000020676	rbm25a	63	76.486	Anabas_testudineus
ENSKMAG00000018826	rbm25b	54	74.376	ENSAPLG00000006643	RBM25	54	75.581	Anas_platyrhynchos
ENSKMAG00000018826	rbm25b	52	74.334	ENSANAG00000028295	RBM25	98	65.398	Aotus_nancymaae
ENSKMAG00000018826	rbm25b	89	75.484	ENSACLG00000027482	rbm25a	86	72.786	Astatotilapia_calliptera
ENSKMAG00000018826	rbm25b	57	93.362	ENSACLG00000024359	rbm25b	56	93.450	Astatotilapia_calliptera
ENSKMAG00000018826	rbm25b	52	78.588	ENSAMXG00000024525	rbm25b	52	76.706	Astyanax_mexicanus
ENSKMAG00000018826	rbm25b	52	74.334	ENSBTAG00000017177	RBM25	50	74.359	Bos_taurus
ENSKMAG00000018826	rbm25b	52	74.334	ENSCJAG00000014441	-	98	65.744	Callithrix_jacchus
ENSKMAG00000018826	rbm25b	52	74.334	ENSTSYG00000003024	RBM25	98	65.744	Carlito_syrichta
ENSKMAG00000018826	rbm25b	52	74.334	ENSCPOG00000002479	RBM25	50	74.359	Cavia_porcellus
ENSKMAG00000018826	rbm25b	52	74.334	ENSCATG00000039651	RBM25	98	65.744	Cercocebus_atys
ENSKMAG00000018826	rbm25b	52	74.334	ENSCLAG00000003977	RBM25	50	74.359	Chinchilla_lanigera
ENSKMAG00000018826	rbm25b	52	74.334	ENSCSAG00000012801	RBM25	50	74.359	Chlorocebus_sabaeus
ENSKMAG00000018826	rbm25b	66	83.784	ENSCHOG00000008903	RBM25	63	83.099	Choloepus_hoffmanni
ENSKMAG00000018826	rbm25b	54	69.300	ENSCPBG00000011025	RBM25	51	69.431	Chrysemys_picta_bellii
ENSKMAG00000018826	rbm25b	86	67.070	ENSCANG00000043874	RBM25	98	65.744	Colobus_angolensis_palliatus
ENSKMAG00000018826	rbm25b	63	63.415	ENSCGRG00001020817	Rbm25	100	62.282	Cricetulus_griseus_chok1gshd
ENSKMAG00000018826	rbm25b	100	82.555	ENSCSEG00000020737	rbm25b	57	87.118	Cynoglossus_semilaevis
ENSKMAG00000018826	rbm25b	56	74.026	ENSCSEG00000009430	rbm25a	57	73.810	Cynoglossus_semilaevis
ENSKMAG00000018826	rbm25b	100	88.098	ENSCVAG00000003478	rbm25b	56	76.674	Cyprinodon_variegatus
ENSKMAG00000018826	rbm25b	69	80.000	ENSCVAG00000005498	rbm25a	99	77.322	Cyprinodon_variegatus
ENSKMAG00000018826	rbm25b	53	65.982	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSKMAG00000018826	rbm25b	63	75.758	ENSDARG00000006395	rbm25b	56	74.153	Danio_rerio
ENSKMAG00000018826	rbm25b	52	74.092	ENSDNOG00000004959	RBM25	50	74.126	Dasypus_novemcinctus
ENSKMAG00000018826	rbm25b	52	74.092	ENSDORG00000013247	Rbm25	51	74.126	Dipodomys_ordii
ENSKMAG00000018826	rbm25b	72	37.942	ENSEBUG00000002963	rbm25b	63	37.531	Eptatretus_burgeri
ENSKMAG00000018826	rbm25b	80	78.056	ENSEEUG00000007350	RBM25	81	73.219	Erinaceus_europaeus
ENSKMAG00000018826	rbm25b	57	65.086	ENSELUG00000021847	rbm25a	51	65.094	Esox_lucius
ENSKMAG00000018826	rbm25b	58	75.000	ENSELUG00000007730	rbm25b	59	84.800	Esox_lucius
ENSKMAG00000018826	rbm25b	52	74.334	ENSFCAG00000011716	RBM25	98	65.744	Felis_catus
ENSKMAG00000018826	rbm25b	54	73.756	ENSFALG00000005445	RBM25	50	75.349	Ficedula_albicollis
ENSKMAG00000018826	rbm25b	52	74.334	ENSFDAG00000006542	RBM25	50	74.359	Fukomys_damarensis
ENSKMAG00000018826	rbm25b	100	65.857	ENSFHEG00000005318	rbm25a	88	70.968	Fundulus_heteroclitus
ENSKMAG00000018826	rbm25b	57	90.638	ENSFHEG00000003513	rbm25b	57	91.028	Fundulus_heteroclitus
ENSKMAG00000018826	rbm25b	85	80.000	ENSGMOG00000014097	rbm25b	63	80.000	Gadus_morhua
ENSKMAG00000018826	rbm25b	81	72.650	ENSGMOG00000014070	rbm25a	87	68.879	Gadus_morhua
ENSKMAG00000018826	rbm25b	98	88.315	ENSGAFG00000001092	rbm25b	52	80.702	Gambusia_affinis
ENSKMAG00000018826	rbm25b	100	71.531	ENSGAFG00000018036	rbm25a	52	83.806	Gambusia_affinis
ENSKMAG00000018826	rbm25b	54	69.369	ENSGAGG00000024524	RBM25	52	71.395	Gopherus_agassizii
ENSKMAG00000018826	rbm25b	52	74.334	ENSGGOG00000002415	RBM25	98	65.744	Gorilla_gorilla
ENSKMAG00000018826	rbm25b	57	92.934	ENSHBUG00000018499	rbm25b	56	93.013	Haplochromis_burtoni
ENSKMAG00000018826	rbm25b	55	77.802	ENSHBUG00000016908	rbm25a	56	76.824	Haplochromis_burtoni
ENSKMAG00000018826	rbm25b	51	74.757	ENSHGLG00100018236	-	94	70.652	Heterocephalus_glaber_male
ENSKMAG00000018826	rbm25b	100	79.500	ENSHCOG00000000142	rbm25b	56	80.952	Hippocampus_comes
ENSKMAG00000018826	rbm25b	56	71.715	ENSIPUG00000021051	rbm25b	54	74.569	Ictalurus_punctatus
ENSKMAG00000018826	rbm25b	52	74.334	ENSSTOG00000011117	RBM25	50	74.359	Ictidomys_tridecemlineatus
ENSKMAG00000018826	rbm25b	100	89.093	ENSLBEG00000010667	rbm25b	56	89.978	Labrus_bergylta
ENSKMAG00000018826	rbm25b	58	73.542	ENSLACG00000011845	RBM25	52	74.783	Latimeria_chalumnae
ENSKMAG00000018826	rbm25b	57	73.013	ENSLOCG00000014196	rbm25b	54	73.077	Lepisosteus_oculatus
ENSKMAG00000018826	rbm25b	52	74.334	ENSMFAG00000040040	RBM25	98	65.744	Macaca_fascicularis
ENSKMAG00000018826	rbm25b	52	74.334	ENSMMUG00000002332	RBM25	100	75.851	Macaca_mulatta
ENSKMAG00000018826	rbm25b	52	74.334	ENSMNEG00000032922	RBM25	51	74.359	Macaca_nemestrina
ENSKMAG00000018826	rbm25b	52	74.334	ENSMLEG00000035157	RBM25	98	65.744	Mandrillus_leucophaeus
ENSKMAG00000018826	rbm25b	53	75.058	ENSMAMG00000000165	rbm25a	51	73.176	Mastacembelus_armatus
ENSKMAG00000018826	rbm25b	58	90.832	ENSMAMG00000004524	rbm25b	56	90.351	Mastacembelus_armatus
ENSKMAG00000018826	rbm25b	57	93.362	ENSMZEG00005001453	rbm25b	56	93.450	Maylandia_zebra
ENSKMAG00000018826	rbm25b	55	77.802	ENSMZEG00005011183	rbm25a	56	76.824	Maylandia_zebra
ENSKMAG00000018826	rbm25b	52	74.334	ENSMICG00000034082	RBM25	98	65.398	Microcebus_murinus
ENSKMAG00000018826	rbm25b	52	74.334	ENSMOCG00000001935	Rbm25	51	74.359	Microtus_ochrogaster
ENSKMAG00000018826	rbm25b	57	75.212	ENSMMOG00000009065	rbm25a	55	73.707	Mola_mola
ENSKMAG00000018826	rbm25b	52	75.422	ENSMODG00000006820	RBM25	50	75.581	Monodelphis_domestica
ENSKMAG00000018826	rbm25b	58	91.213	ENSMALG00000020441	rbm25b	88	91.522	Monopterus_albus
ENSKMAG00000018826	rbm25b	52	74.334	MGP_CAROLIEiJ_G0017921	Rbm25	94	70.652	Mus_caroli
ENSKMAG00000018826	rbm25b	52	74.334	ENSMUSG00000010608	Rbm25	94	70.652	Mus_musculus
ENSKMAG00000018826	rbm25b	52	74.334	MGP_PahariEiJ_G0029677	Rbm25	94	70.652	Mus_pahari
ENSKMAG00000018826	rbm25b	52	74.334	MGP_SPRETEiJ_G0018766	-	94	70.652	Mus_spretus
ENSKMAG00000018826	rbm25b	54	63.333	ENSMLUG00000024167	-	51	67.396	Myotis_lucifugus
ENSKMAG00000018826	rbm25b	54	70.163	ENSMLUG00000015434	-	84	70.396	Myotis_lucifugus
ENSKMAG00000018826	rbm25b	52	74.334	ENSNGAG00000018465	Rbm25	50	74.359	Nannospalax_galili
ENSKMAG00000018826	rbm25b	55	77.802	ENSNBRG00000003761	rbm25a	56	76.824	Neolamprologus_brichardi
ENSKMAG00000018826	rbm25b	57	85.439	ENSNBRG00000022192	rbm25b	55	83.188	Neolamprologus_brichardi
ENSKMAG00000018826	rbm25b	52	74.940	ENSNLEG00000002701	RBM25	98	65.744	Nomascus_leucogenys
ENSKMAG00000018826	rbm25b	100	60.610	ENSOCUG00000013737	RBM25	50	74.359	Oryctolagus_cuniculus
ENSKMAG00000018826	rbm25b	58	86.864	ENSORLG00000011874	rbm25b	56	87.965	Oryzias_latipes
ENSKMAG00000018826	rbm25b	58	87.076	ENSORLG00020016422	rbm25b	56	88.184	Oryzias_latipes_hni
ENSKMAG00000018826	rbm25b	58	87.076	ENSORLG00015011269	rbm25b	56	88.184	Oryzias_latipes_hsok
ENSKMAG00000018826	rbm25b	57	87.393	ENSOMEG00000023172	rbm25b	56	87.746	Oryzias_melastigma
ENSKMAG00000018826	rbm25b	50	67.550	ENSOMEG00000022138	rbm25a	62	83.740	Oryzias_melastigma
ENSKMAG00000018826	rbm25b	51	74.515	ENSOGAG00000014986	RBM25	51	74.359	Otolemur_garnettii
ENSKMAG00000018826	rbm25b	52	74.334	ENSOARG00000000319	RBM25	50	74.359	Ovis_aries
ENSKMAG00000018826	rbm25b	52	74.334	ENSPPAG00000039402	RBM25	98	65.744	Pan_paniscus
ENSKMAG00000018826	rbm25b	52	74.334	ENSPPRG00000017374	RBM25	98	65.744	Panthera_pardus
ENSKMAG00000018826	rbm25b	52	74.334	ENSPTIG00000017309	RBM25	98	65.744	Panthera_tigris_altaica
ENSKMAG00000018826	rbm25b	52	74.334	ENSPTRG00000006509	RBM25	98	65.744	Pan_troglodytes
ENSKMAG00000018826	rbm25b	52	74.334	ENSPANG00000018212	RBM25	98	65.744	Papio_anubis
ENSKMAG00000018826	rbm25b	58	76.778	ENSPKIG00000003203	rbm25b	56	76.282	Paramormyrops_kingsleyae
ENSKMAG00000018826	rbm25b	52	74.818	ENSPSIG00000006058	RBM25	50	74.359	Pelodiscus_sinensis
ENSKMAG00000018826	rbm25b	58	86.929	ENSPMGG00000015740	rbm25b	57	87.257	Periophthalmus_magnuspinnatus
ENSKMAG00000018826	rbm25b	53	63.256	ENSPMGG00000001791	rbm25a	100	63.680	Periophthalmus_magnuspinnatus
ENSKMAG00000018826	rbm25b	55	79.167	ENSPFOG00000018808	rbm25b	56	76.840	Poecilia_formosa
ENSKMAG00000018826	rbm25b	55	70.437	ENSPFOG00000017931	rbm25a	57	84.211	Poecilia_formosa
ENSKMAG00000018826	rbm25b	100	71.856	ENSPLAG00000018338	rbm25a	57	84.211	Poecilia_latipinna
ENSKMAG00000018826	rbm25b	55	78.958	ENSPMEG00000019161	rbm25b	56	76.840	Poecilia_mexicana
ENSKMAG00000018826	rbm25b	100	71.856	ENSPMEG00000024470	rbm25a	57	84.211	Poecilia_mexicana
ENSKMAG00000018826	rbm25b	55	79.002	ENSPREG00000008522	rbm25b	56	76.509	Poecilia_reticulata
ENSKMAG00000018826	rbm25b	55	76.096	ENSPREG00000009228	rbm25a	58	84.211	Poecilia_reticulata
ENSKMAG00000018826	rbm25b	88	67.728	ENSPCAG00000006226	RBM25	78	74.359	Procavia_capensis
ENSKMAG00000018826	rbm25b	52	74.334	ENSPCOG00000023107	RBM25	98	65.744	Propithecus_coquereli
ENSKMAG00000018826	rbm25b	52	74.334	ENSPVAG00000003931	RBM25	50	74.359	Pteropus_vampyrus
ENSKMAG00000018826	rbm25b	57	85.653	ENSPNYG00000023303	rbm25b	55	83.406	Pundamilia_nyererei
ENSKMAG00000018826	rbm25b	57	75.484	ENSPNYG00000022596	rbm25a	54	73.502	Pundamilia_nyererei
ENSKMAG00000018826	rbm25b	58	76.360	ENSPNAG00000012024	rbm25b	55	75.817	Pygocentrus_nattereri
ENSKMAG00000018826	rbm25b	54	72.109	ENSRNOG00000002871	Rbm25l1	52	73.256	Rattus_norvegicus
ENSKMAG00000018826	rbm25b	52	74.334	ENSRBIG00000039904	RBM25	98	65.744	Rhinopithecus_bieti
ENSKMAG00000018826	rbm25b	52	74.334	ENSRROG00000035556	RBM25	97	77.901	Rhinopithecus_roxellana
ENSKMAG00000018826	rbm25b	52	75.422	ENSSHAG00000012859	RBM25	50	75.581	Sarcophilus_harrisii
ENSKMAG00000018826	rbm25b	57	75.319	ENSSFOG00015007093	rbm25	57	75.269	Scleropages_formosus
ENSKMAG00000018826	rbm25b	57	77.004	ENSSMAG00000009745	rbm25a	57	76.445	Scophthalmus_maximus
ENSKMAG00000018826	rbm25b	55	79.476	ENSSDUG00000017984	rbm25a	57	78.879	Seriola_dumerili
ENSKMAG00000018826	rbm25b	55	79.476	ENSSLDG00000010342	rbm25a	56	78.879	Seriola_lalandi_dorsalis
ENSKMAG00000018826	rbm25b	56	93.886	ENSSLDG00000024573	rbm25b	100	93.886	Seriola_lalandi_dorsalis
ENSKMAG00000018826	rbm25b	52	74.334	ENSSARG00000002327	RBM25	50	74.359	Sorex_araneus
ENSKMAG00000018826	rbm25b	55	76.759	ENSSPAG00000011114	rbm25a	57	76.842	Stegastes_partitus
ENSKMAG00000018826	rbm25b	91	86.641	ENSSPAG00000016168	rbm25b	56	92.105	Stegastes_partitus
ENSKMAG00000018826	rbm25b	54	73.303	ENSTGUG00000011246	-	50	74.884	Taeniopygia_guttata
ENSKMAG00000018826	rbm25b	57	72.669	ENSTRUG00000003076	rbm25a	57	72.354	Takifugu_rubripes
ENSKMAG00000018826	rbm25b	58	89.979	ENSTRUG00000017964	rbm25b	57	90.175	Takifugu_rubripes
ENSKMAG00000018826	rbm25b	96	76.355	ENSTNIG00000012222	rbm25b	69	85.217	Tetraodon_nigroviridis
ENSKMAG00000018826	rbm25b	57	79.612	ENSTBEG00000010538	-	55	79.612	Tupaia_belangeri
ENSKMAG00000018826	rbm25b	52	68.642	ENSUAMG00000007707	RBM25	100	75.851	Ursus_americanus
ENSKMAG00000018826	rbm25b	80	74.272	ENSVPAG00000009052	RBM25	85	69.388	Vicugna_pacos
ENSKMAG00000018826	rbm25b	96	63.882	ENSXETG00000021857	rbm25	83	74.879	Xenopus_tropicalis
ENSKMAG00000018826	rbm25b	100	82.561	ENSXCOG00000002222	rbm25b	55	79.310	Xiphophorus_couchianus
ENSKMAG00000018826	rbm25b	100	71.685	ENSXCOG00000004043	RBM25	55	72.581	Xiphophorus_couchianus
ENSKMAG00000018826	rbm25b	100	69.231	ENSXMAG00000009077	RBM25	58	83.401	Xiphophorus_maculatus
ENSKMAG00000018826	rbm25b	100	88.929	ENSXMAG00000017290	rbm25b	54	76.774	Xiphophorus_maculatus