EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018897 (Gene tree)
Gene ID: 108232916
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8782 bases
Position: chrLWHD01000018.1:1842497-1851278
Accession: 108232916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025611	KH_1	PF00013.29	2.1e-68	1	4
ENSKMAP00000025611	KH_1	PF00013.29	2.1e-68	2	4
ENSKMAP00000025611	KH_1	PF00013.29	2.1e-68	3	4
ENSKMAP00000025611	KH_1	PF00013.29	2.1e-68	4	4
ENSKMAP00000025563	KH_1	PF00013.29	2.8e-68	1	4
ENSKMAP00000025563	KH_1	PF00013.29	2.8e-68	2	4
ENSKMAP00000025563	KH_1	PF00013.29	2.8e-68	3	4
ENSKMAP00000025563	KH_1	PF00013.29	2.8e-68	4	4
ENSKMAP00000025624	KH_1	PF00013.29	2.8e-68	1	4
ENSKMAP00000025624	KH_1	PF00013.29	2.8e-68	2	4
ENSKMAP00000025624	KH_1	PF00013.29	2.8e-68	3	4
ENSKMAP00000025624	KH_1	PF00013.29	2.8e-68	4	4
ENSKMAP00000025611	KH_2	PF07650.17	9.4e-21	1	2
ENSKMAP00000025611	KH_2	PF07650.17	9.4e-21	2	2
ENSKMAP00000025563	KH_2	PF07650.17	1.2e-20	1	2
ENSKMAP00000025563	KH_2	PF07650.17	1.2e-20	2	2
ENSKMAP00000025624	KH_2	PF07650.17	1.2e-20	1	2
ENSKMAP00000025624	KH_2	PF07650.17	1.2e-20	2	2
ENSKMAP00000025563	DUF1897	PF09005.10	2.3e-14	1	2
ENSKMAP00000025563	DUF1897	PF09005.10	2.3e-14	2	2
ENSKMAP00000025624	DUF1897	PF09005.10	2.3e-14	1	2
ENSKMAP00000025624	DUF1897	PF09005.10	2.3e-14	2	2
ENSKMAP00000025611	DUF1897	PF09005.10	1.4e-12	1	2
ENSKMAP00000025611	DUF1897	PF09005.10	1.4e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025885	-	3838	XM_017411042	ENSKMAP00000025563	657 (aa)	XP_017266531	UPI0007F87AAC
ENSKMAT00000025933	-	1869	-	ENSKMAP00000025611	622 (aa)	-	-
ENSKMAT00000025946	-	2036	-	ENSKMAP00000025624	658 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000018897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018897	fubp1	53	32.927	ENSKMAG00000014252	pcbp4	70	35.616
ENSKMAG00000018897	fubp1	51	40.845	ENSKMAG00000017554	-	86	46.667
ENSKMAG00000018897	fubp1	51	38.095	ENSKMAG00000018530	-	76	34.091
ENSKMAG00000018897	fubp1	59	44.444	ENSKMAG00000011367	-	96	44.444
ENSKMAG00000018897	fubp1	95	49.505	ENSKMAG00000021164	-	95	58.140
ENSKMAG00000018897	fubp1	59	46.032	ENSKMAG00000012031	PCBP2	88	46.032
ENSKMAG00000018897	fubp1	53	35.526	ENSKMAG00000003046	pcbp3	68	35.802
ENSKMAG00000018897	fubp1	50	30.872	ENSKMAG00000016179	-	71	30.872
ENSKMAG00000018897	fubp1	97	53.055	ENSKMAG00000018579	khsrp	98	52.593
ENSKMAG00000018897	fubp1	55	32.026	ENSKMAG00000019838	igf2bp3	63	31.214
ENSKMAG00000018897	fubp1	93	48.299	ENSKMAG00000016886	fubp3	96	46.350
ENSKMAG00000018897	fubp1	61	36.364	ENSKMAG00000014225	nova1	51	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018897	fubp1	69	77.042	ENSG00000162613	FUBP1	100	70.399	Homo_sapiens
ENSKMAG00000018897	fubp1	99	92.271	ENSAPOG00000014845	fubp1	98	92.271	Acanthochromis_polyacanthus
ENSKMAG00000018897	fubp1	69	73.013	ENSAMEG00000007372	FUBP1	100	68.343	Ailuropoda_melanoleuca
ENSKMAG00000018897	fubp1	100	91.879	ENSACIG00000020024	fubp1	100	91.401	Amphilophus_citrinellus
ENSKMAG00000018897	fubp1	100	87.812	ENSAPEG00000012232	fubp1	100	86.875	Amphiprion_percula
ENSKMAG00000018897	fubp1	100	93.607	ENSATEG00000018619	fubp1	100	95.129	Anabas_testudineus
ENSKMAG00000018897	fubp1	64	78.935	ENSAPLG00000005965	FUBP1	100	71.921	Anas_platyrhynchos
ENSKMAG00000018897	fubp1	67	75.687	ENSACAG00000006310	FUBP1	96	68.931	Anolis_carolinensis
ENSKMAG00000018897	fubp1	100	93.760	ENSACLG00000006708	fubp1	100	93.760	Astatotilapia_calliptera
ENSKMAG00000018897	fubp1	87	85.393	ENSAMXG00000005525	fubp1	99	85.019	Astyanax_mexicanus
ENSKMAG00000018897	fubp1	69	77.263	ENSCJAG00000007062	FUBP1	100	71.121	Callithrix_jacchus
ENSKMAG00000018897	fubp1	69	76.432	ENSCAFG00000020361	FUBP1	100	70.552	Canis_familiaris
ENSKMAG00000018897	fubp1	64	79.753	ENSTSYG00000000148	FUBP1	100	70.752	Carlito_syrichta
ENSKMAG00000018897	fubp1	55	84.739	ENSCAPG00000011052	-	65	84.739	Cavia_aperea
ENSKMAG00000018897	fubp1	69	76.432	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSKMAG00000018897	fubp1	91	64.162	ENSCCAG00000036537	FUBP1	100	64.740	Cebus_capucinus
ENSKMAG00000018897	fubp1	69	76.211	ENSCATG00000042126	FUBP1	100	70.399	Cercocebus_atys
ENSKMAG00000018897	fubp1	69	79.405	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSKMAG00000018897	fubp1	69	76.211	ENSCSAG00000001402	FUBP1	100	70.399	Chlorocebus_sabaeus
ENSKMAG00000018897	fubp1	69	76.211	ENSCHOG00000008177	FUBP1	98	70.507	Choloepus_hoffmanni
ENSKMAG00000018897	fubp1	69	78.125	ENSCGRG00001007103	Fubp1	100	70.769	Cricetulus_griseus_chok1gshd
ENSKMAG00000018897	fubp1	64	77.778	ENSCGRG00000003372	Fubp1	100	70.569	Cricetulus_griseus_crigri
ENSKMAG00000018897	fubp1	100	88.732	ENSCSEG00000021412	fubp1	100	88.106	Cynoglossus_semilaevis
ENSKMAG00000018897	fubp1	99	95.725	ENSCVAG00000014487	fubp1	99	95.725	Cyprinodon_variegatus
ENSKMAG00000018897	fubp1	100	80.000	ENSDARG00000029248	fubp1	100	82.963	Danio_rerio
ENSKMAG00000018897	fubp1	82	54.762	ENSDNOG00000034565	-	87	49.663	Dasypus_novemcinctus
ENSKMAG00000018897	fubp1	69	76.600	ENSDORG00000016534	Fubp1	98	70.507	Dipodomys_ordii
ENSKMAG00000018897	fubp1	72	78.947	ENSETEG00000000948	-	59	79.240	Echinops_telfairi
ENSKMAG00000018897	fubp1	65	70.909	ENSEBUG00000016143	fubp1	67	58.904	Eptatretus_burgeri
ENSKMAG00000018897	fubp1	72	82.770	ENSEEUG00000001287	FUBP1	85	68.560	Erinaceus_europaeus
ENSKMAG00000018897	fubp1	100	83.084	ENSELUG00000007990	fubp1	100	85.329	Esox_lucius
ENSKMAG00000018897	fubp1	69	77.827	ENSFALG00000005768	FUBP1	97	71.561	Ficedula_albicollis
ENSKMAG00000018897	fubp1	69	76.211	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSKMAG00000018897	fubp1	100	96.195	ENSFHEG00000005230	fubp1	100	96.195	Fundulus_heteroclitus
ENSKMAG00000018897	fubp1	100	85.063	ENSGMOG00000003370	fubp1	100	84.906	Gadus_morhua
ENSKMAG00000018897	fubp1	69	78.319	ENSGALG00000008939	FUBP1	100	72.308	Gallus_gallus
ENSKMAG00000018897	fubp1	100	94.910	ENSGAFG00000020972	fubp1	100	94.910	Gambusia_affinis
ENSKMAG00000018897	fubp1	100	90.297	ENSGACG00000016563	fubp1	100	90.297	Gasterosteus_aculeatus
ENSKMAG00000018897	fubp1	100	94.064	ENSHBUG00000009835	fubp1	100	95.695	Haplochromis_burtoni
ENSKMAG00000018897	fubp1	100	65.217	ENSHGLG00000002808	-	100	63.804	Heterocephalus_glaber_female
ENSKMAG00000018897	fubp1	69	76.432	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSKMAG00000018897	fubp1	100	65.683	ENSHGLG00100001414	-	100	64.417	Heterocephalus_glaber_male
ENSKMAG00000018897	fubp1	69	76.432	ENSHGLG00100003417	-	100	70.076	Heterocephalus_glaber_male
ENSKMAG00000018897	fubp1	100	89.568	ENSHCOG00000000910	fubp1	100	90.015	Hippocampus_comes
ENSKMAG00000018897	fubp1	100	82.353	ENSIPUG00000009896	fubp1	100	83.560	Ictalurus_punctatus
ENSKMAG00000018897	fubp1	69	78.995	ENSSTOG00000014312	FUBP1	100	70.552	Ictidomys_tridecemlineatus
ENSKMAG00000018897	fubp1	69	78.153	ENSJJAG00000020069	Fubp1	100	70.795	Jaculus_jaculus
ENSKMAG00000018897	fubp1	99	89.747	ENSLBEG00000012700	fubp1	97	91.382	Labrus_bergylta
ENSKMAG00000018897	fubp1	98	79.851	ENSLOCG00000003745	fubp1	99	79.941	Lepisosteus_oculatus
ENSKMAG00000018897	fubp1	69	73.418	ENSLAFG00000003273	FUBP1	99	73.393	Loxodonta_africana
ENSKMAG00000018897	fubp1	69	77.042	ENSMFAG00000031825	FUBP1	100	70.968	Macaca_fascicularis
ENSKMAG00000018897	fubp1	69	78.767	ENSMMUG00000002899	FUBP1	100	70.399	Macaca_mulatta
ENSKMAG00000018897	fubp1	69	76.211	ENSMNEG00000045212	FUBP1	100	70.399	Macaca_nemestrina
ENSKMAG00000018897	fubp1	99	92.042	ENSMAMG00000007489	fubp1	99	92.042	Mastacembelus_armatus
ENSKMAG00000018897	fubp1	100	95.223	ENSMZEG00005024298	fubp1	100	95.223	Maylandia_zebra
ENSKMAG00000018897	fubp1	64	78.986	ENSMGAG00000009424	FUBP1	100	72.222	Meleagris_gallopavo
ENSKMAG00000018897	fubp1	69	76.432	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSKMAG00000018897	fubp1	69	78.995	ENSMOCG00000014751	Fubp1	100	72.257	Microtus_ochrogaster
ENSKMAG00000018897	fubp1	88	93.419	ENSMMOG00000019463	fubp1	99	92.870	Mola_mola
ENSKMAG00000018897	fubp1	66	70.470	ENSMODG00000020804	FUBP1	100	65.941	Monodelphis_domestica
ENSKMAG00000018897	fubp1	100	92.846	ENSMALG00000015173	fubp1	100	93.455	Monopterus_albus
ENSKMAG00000018897	fubp1	67	79.955	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.527	Mus_caroli
ENSKMAG00000018897	fubp1	67	79.733	ENSMUSG00000028034	Fubp1	99	76.336	Mus_musculus
ENSKMAG00000018897	fubp1	67	79.778	MGP_PahariEiJ_G0027191	Fubp1	99	76.381	Mus_pahari
ENSKMAG00000018897	fubp1	67	79.955	MGP_SPRETEiJ_G0026693	Fubp1	99	76.527	Mus_spretus
ENSKMAG00000018897	fubp1	69	72.860	ENSMLUG00000014802	FUBP1	100	68.189	Myotis_lucifugus
ENSKMAG00000018897	fubp1	69	76.092	ENSNGAG00000014302	Fubp1	100	69.811	Nannospalax_galili
ENSKMAG00000018897	fubp1	100	89.228	ENSNBRG00000015099	fubp1	100	89.727	Neolamprologus_brichardi
ENSKMAG00000018897	fubp1	69	72.527	ENSNLEG00000009772	FUBP1	100	68.349	Nomascus_leucogenys
ENSKMAG00000018897	fubp1	89	70.435	ENSOPRG00000001175	FUBP1	98	60.092	Ochotona_princeps
ENSKMAG00000018897	fubp1	69	76.432	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSKMAG00000018897	fubp1	99	53.071	ENSODEG00000003657	-	100	50.755	Octodon_degus
ENSKMAG00000018897	fubp1	99	94.046	ENSONIG00000018381	fubp1	97	93.893	Oreochromis_niloticus
ENSKMAG00000018897	fubp1	57	84.746	ENSOANG00000009777	FUBP1	99	71.197	Ornithorhynchus_anatinus
ENSKMAG00000018897	fubp1	99	85.578	ENSORLG00000003540	fubp1	99	85.420	Oryzias_latipes
ENSKMAG00000018897	fubp1	100	93.009	ENSORLG00020005908	fubp1	96	93.009	Oryzias_latipes_hni
ENSKMAG00000018897	fubp1	100	92.564	ENSORLG00015008779	fubp1	99	92.542	Oryzias_latipes_hsok
ENSKMAG00000018897	fubp1	100	92.694	ENSOMEG00000021943	fubp1	100	91.961	Oryzias_melastigma
ENSKMAG00000018897	fubp1	69	72.708	ENSOGAG00000014233	FUBP1	100	67.941	Otolemur_garnettii
ENSKMAG00000018897	fubp1	69	77.263	ENSOARG00000013259	FUBP1	100	72.148	Ovis_aries
ENSKMAG00000018897	fubp1	69	76.432	ENSPPRG00000000413	FUBP1	100	70.552	Panthera_pardus
ENSKMAG00000018897	fubp1	69	76.432	ENSPTIG00000019450	FUBP1	100	70.552	Panthera_tigris_altaica
ENSKMAG00000018897	fubp1	65	77.857	ENSPSIG00000012965	FUBP1	100	71.359	Pelodiscus_sinensis
ENSKMAG00000018897	fubp1	99	83.094	ENSPMGG00000009060	fubp1	99	82.775	Periophthalmus_magnuspinnatus
ENSKMAG00000018897	fubp1	69	77.506	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSKMAG00000018897	fubp1	55	58.952	ENSPMAG00000001644	-	93	58.952	Petromyzon_marinus
ENSKMAG00000018897	fubp1	100	96.651	ENSPFOG00000000238	fubp1	100	96.651	Poecilia_formosa
ENSKMAG00000018897	fubp1	100	94.521	ENSPLAG00000021170	fubp1	100	94.521	Poecilia_latipinna
ENSKMAG00000018897	fubp1	99	93.579	ENSPMEG00000004747	fubp1	99	97.655	Poecilia_mexicana
ENSKMAG00000018897	fubp1	100	96.499	ENSPREG00000017911	fubp1	100	96.499	Poecilia_reticulata
ENSKMAG00000018897	fubp1	71	76.509	ENSPPYG00000001219	-	68	79.601	Pongo_abelii
ENSKMAG00000018897	fubp1	69	76.380	ENSPCAG00000012617	FUBP1	98	70.308	Procavia_capensis
ENSKMAG00000018897	fubp1	69	77.803	ENSPCOG00000024974	FUBP1	100	70.552	Propithecus_coquereli
ENSKMAG00000018897	fubp1	69	70.264	ENSPVAG00000014637	FUBP1	98	66.206	Pteropus_vampyrus
ENSKMAG00000018897	fubp1	100	93.912	ENSPNYG00000004552	fubp1	100	93.760	Pundamilia_nyererei
ENSKMAG00000018897	fubp1	100	84.060	ENSPNAG00000016207	fubp1	100	85.263	Pygocentrus_nattereri
ENSKMAG00000018897	fubp1	69	77.506	ENSRNOG00000043370	Fubp1	100	70.923	Rattus_norvegicus
ENSKMAG00000018897	fubp1	69	76.211	ENSRBIG00000042950	FUBP1	100	70.399	Rhinopithecus_bieti
ENSKMAG00000018897	fubp1	69	76.211	ENSRROG00000043534	FUBP1	100	70.399	Rhinopithecus_roxellana
ENSKMAG00000018897	fubp1	69	76.432	ENSSBOG00000027299	FUBP1	98	74.349	Saimiri_boliviensis_boliviensis
ENSKMAG00000018897	fubp1	57	84.181	ENSSHAG00000005367	FUBP1	99	74.094	Sarcophilus_harrisii
ENSKMAG00000018897	fubp1	99	83.359	ENSSFOG00015010213	fubp1	99	83.206	Scleropages_formosus
ENSKMAG00000018897	fubp1	100	88.839	ENSSMAG00000012029	fubp1	98	88.988	Scophthalmus_maximus
ENSKMAG00000018897	fubp1	100	92.515	ENSSDUG00000007383	fubp1	98	94.012	Seriola_dumerili
ENSKMAG00000018897	fubp1	100	92.515	ENSSLDG00000022863	fubp1	98	94.012	Seriola_lalandi_dorsalis
ENSKMAG00000018897	fubp1	69	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSKMAG00000018897	fubp1	99	68.390	ENSSPUG00000008389	FUBP1	100	67.435	Sphenodon_punctatus
ENSKMAG00000018897	fubp1	100	94.216	ENSSPAG00000010161	fubp1	100	94.368	Stegastes_partitus
ENSKMAG00000018897	fubp1	64	78.043	ENSTGUG00000006841	FUBP1	100	71.382	Taeniopygia_guttata
ENSKMAG00000018897	fubp1	100	86.009	ENSTRUG00000004615	fubp1	100	87.316	Takifugu_rubripes
ENSKMAG00000018897	fubp1	78	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSKMAG00000018897	fubp1	69	76.432	ENSTTRG00000000096	FUBP1	98	70.353	Tursiops_truncatus
ENSKMAG00000018897	fubp1	69	76.432	ENSVPAG00000004709	FUBP1	99	70.353	Vicugna_pacos
ENSKMAG00000018897	fubp1	100	85.354	ENSXCOG00000019354	fubp1	100	84.458	Xiphophorus_couchianus
ENSKMAG00000018897	fubp1	91	97.320	ENSXMAG00000007168	fubp1	99	97.320	Xiphophorus_maculatus