EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000018937 (Gene tree)
Gene ID: 108239829
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6197 bases
Position: chrLWHD01000068.1:159606-165802
Accession: 108239829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025540	zf-met	PF12874.7	5.8e-21	1	4
ENSKMAP00000025540	zf-met	PF12874.7	5.8e-21	2	4
ENSKMAP00000025540	zf-met	PF12874.7	5.8e-21	3	4
ENSKMAP00000025540	zf-met	PF12874.7	5.8e-21	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025860	-	2546	XM_017422782	ENSKMAP00000025540	614 (aa)	XP_017278271	-

Gene Model

Click here to download ENSKMAG00000018937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018937	-	94	45.923	ENSACIG00000003672	-	100	47.619	Amphilophus_citrinellus
ENSKMAG00000018937	-	56	52.368	ENSFHEG00000022774	-	52	48.241	Fundulus_heteroclitus
ENSKMAG00000018937	-	72	48.829	ENSGAFG00000021491	-	73	48.220	Gambusia_affinis
ENSKMAG00000018937	-	64	54.436	ENSMAMG00000018920	-	100	50.980	Mastacembelus_armatus
ENSKMAG00000018937	-	91	45.156	ENSNBRG00000018883	-	100	47.578	Neolamprologus_brichardi
ENSKMAG00000018937	-	55	49.330	ENSONIG00000020374	-	81	47.089	Oreochromis_niloticus
ENSKMAG00000018937	-	92	48.969	ENSORLG00000026368	-	98	47.160	Oryzias_latipes
ENSKMAG00000018937	-	92	49.565	ENSORLG00020000211	-	98	46.496	Oryzias_latipes_hni
ENSKMAG00000018937	-	92	48.866	ENSORLG00015004724	-	71	53.218	Oryzias_latipes_hsok
ENSKMAG00000018937	-	93	47.049	ENSOMEG00000002792	-	70	52.296	Oryzias_melastigma
ENSKMAG00000018937	-	96	48.013	ENSPFOG00000010723	-	97	46.064	Poecilia_formosa
ENSKMAG00000018937	-	94	48.731	ENSPLAG00000012038	-	100	46.939	Poecilia_latipinna
ENSKMAG00000018937	-	94	49.581	ENSPMEG00000020927	-	100	47.059	Poecilia_mexicana
ENSKMAG00000018937	-	82	47.637	ENSPREG00000020523	-	100	46.756	Poecilia_reticulata
ENSKMAG00000018937	-	86	45.488	ENSPNYG00000003309	-	99	48.346	Pundamilia_nyererei
ENSKMAG00000018937	-	62	52.308	ENSSLDG00000017802	-	100	49.570	Seriola_lalandi_dorsalis
ENSKMAG00000018937	-	94	48.680	ENSXMAG00000002135	-	71	52.048	Xiphophorus_maculatus