EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000018973 (Gene tree)
Gene ID: 108244319
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-3D-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14205 bases
Position: chrLWHD01000139.1:223814-238018
Accession: 108244319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000025614	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000025936	-	1522	XM_017430423	ENSKMAP00000025614	221 (aa)	XP_017285912	UPI0007F88812

Gene Model

Click here to download ENSKMAG00000018973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000018973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000018973	-	74	34.706	ENSKMAG00000017150	-	76	34.706
ENSKMAG00000018973	-	92	38.462	ENSKMAG00000001191	RAB15	99	38.462
ENSKMAG00000018973	-	67	35.570	ENSKMAG00000003105	rab33ba	63	35.570
ENSKMAG00000018973	-	66	36.842	ENSKMAG00000020034	-	52	36.842
ENSKMAG00000018973	-	76	43.452	ENSKMAG00000006082	-	77	43.452
ENSKMAG00000018973	-	90	40.594	ENSKMAG00000009799	rab2a	95	40.594
ENSKMAG00000018973	-	90	37.745	ENSKMAG00000015516	rab11al	95	37.745
ENSKMAG00000018973	-	78	45.665	ENSKMAG00000006854	rab35b	99	41.872
ENSKMAG00000018973	-	87	38.278	ENSKMAG00000006170	-	96	38.278
ENSKMAG00000018973	-	91	44.608	ENSKMAG00000014038	-	95	44.608
ENSKMAG00000018973	-	89	40.201	ENSKMAG00000015507	rab6ba	94	40.201
ENSKMAG00000018973	-	71	38.037	ENSKMAG00000006593	rab33a	76	38.037
ENSKMAG00000018973	-	93	36.321	ENSKMAG00000017487	rab14	99	36.321
ENSKMAG00000018973	-	73	46.914	ENSKMAG00000003494	si:dkey-16l2.16	89	42.021
ENSKMAG00000018973	-	90	32.843	ENSKMAG00000020013	-	97	32.843
ENSKMAG00000018973	-	71	31.447	ENSKMAG00000000984	rasd4	76	31.447
ENSKMAG00000018973	-	72	36.585	ENSKMAG00000019964	rab9b	81	36.585
ENSKMAG00000018973	-	93	36.150	ENSKMAG00000011301	-	99	36.150
ENSKMAG00000018973	-	67	40.268	ENSKMAG00000002862	zgc:101559	63	40.268
ENSKMAG00000018973	-	91	43.478	ENSKMAG00000017357	rab1ab	99	43.478
ENSKMAG00000018973	-	71	38.608	ENSKMAG00000014705	rab22a	81	38.608
ENSKMAG00000018973	-	70	36.364	ENSKMAG00000020038	rab5c	86	34.197
ENSKMAG00000018973	-	66	31.410	ENSKMAG00000017097	rasl11a	63	31.410
ENSKMAG00000018973	-	73	31.515	ENSKMAG00000019341	rab34b	65	31.515
ENSKMAG00000018973	-	82	41.530	ENSKMAG00000015488	rab25b	88	41.209
ENSKMAG00000018973	-	92	37.327	ENSKMAG00000007267	rab42a	99	37.327
ENSKMAG00000018973	-	71	44.231	ENSKMAG00000013146	-	81	44.231
ENSKMAG00000018973	-	73	37.126	ENSKMAG00000003646	-	83	37.126
ENSKMAG00000018973	-	92	38.235	ENSKMAG00000012657	-	90	38.235
ENSKMAG00000018973	-	76	46.154	ENSKMAG00000009856	zgc:171927	79	46.154
ENSKMAG00000018973	-	76	44.643	ENSKMAG00000011905	rab11a	78	44.643
ENSKMAG00000018973	-	79	32.597	ENSKMAG00000019397	rhebl1	92	32.597
ENSKMAG00000018973	-	74	36.810	ENSKMAG00000017417	-	74	36.810
ENSKMAG00000018973	-	76	33.728	ENSKMAG00000020448	rheb	91	33.728
ENSKMAG00000018973	-	71	37.423	ENSKMAG00000006812	RAB7A	78	37.423
ENSKMAG00000018973	-	92	41.667	ENSKMAG00000006810	rab1ba	99	41.667
ENSKMAG00000018973	-	69	31.410	ENSKMAG00000019647	rab34a	59	31.410
ENSKMAG00000018973	-	89	33.838	ENSKMAG00000020733	rras	95	34.673
ENSKMAG00000018973	-	65	34.899	ENSKMAG00000003080	si:cabz01085950.1	71	34.899
ENSKMAG00000018973	-	75	41.317	ENSKMAG00000008625	RAB39B	78	41.317
ENSKMAG00000018973	-	89	38.916	ENSKMAG00000002545	-	92	38.916
ENSKMAG00000018973	-	79	40.805	ENSKMAG00000004945	rab25a	82	40.805
ENSKMAG00000018973	-	76	42.857	ENSKMAG00000009033	rab11bb	77	42.857
ENSKMAG00000018973	-	70	37.013	ENSKMAG00000005111	rab5aa	71	37.013
ENSKMAG00000018973	-	77	40.936	ENSKMAG00000020250	rab4a	80	40.936
ENSKMAG00000018973	-	70	36.129	ENSKMAG00000018270	rab23	74	35.632
ENSKMAG00000018973	-	86	37.629	ENSKMAG00000004439	rab30	94	37.629
ENSKMAG00000018973	-	89	40.609	ENSKMAG00000011278	rab6bb	93	40.609
ENSKMAG00000018973	-	83	49.462	ENSKMAG00000020056	rab12	77	49.727
ENSKMAG00000018973	-	86	31.795	ENSKMAG00000021039	si:dkey-13a21.4	80	31.795
ENSKMAG00000018973	-	77	45.029	ENSKMAG00000007364	rab18b	83	45.029
ENSKMAG00000018973	-	71	34.356	ENSKMAG00000017662	rab9a	80	34.356
ENSKMAG00000018973	-	73	39.394	ENSKMAG00000012778	si:dkey-34d22.5	74	39.394
ENSKMAG00000018973	-	92	39.810	ENSKMAG00000020392	rab15	99	39.810
ENSKMAG00000018973	-	92	46.798	ENSKMAG00000001908	rab13	98	46.798
ENSKMAG00000018973	-	71	30.818	ENSKMAG00000003938	kras	84	30.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000018973	-	95	79.717	ENSACAG00000016810	RAB3D	93	79.717	Anolis_carolinensis
ENSKMAG00000018973	-	70	83.974	ENSDARG00000018107	rab3da	93	83.974	Danio_rerio
ENSKMAG00000018973	-	96	81.132	ENSHCOG00000017123	-	99	81.132	Hippocampus_comes
ENSKMAG00000018973	-	100	69.231	ENSOCUG00000025381	RAB3D	100	69.231	Oryctolagus_cuniculus
ENSKMAG00000018973	-	100	66.368	ENSORLG00000016555	rab3db	99	68.421	Oryzias_latipes
ENSKMAG00000018973	-	94	69.082	ENSORLG00020021663	rab3db	93	69.565	Oryzias_latipes_hni
ENSKMAG00000018973	-	94	69.082	ENSORLG00015014594	rab3db	93	69.231	Oryzias_latipes_hsok
ENSKMAG00000018973	-	100	78.281	ENSPKIG00000009021	rab3db	100	78.281	Paramormyrops_kingsleyae
ENSKMAG00000018973	-	100	73.756	ENSPCIG00000017722	RAB3D	100	73.756	Phascolarctos_cinereus
ENSKMAG00000018973	-	100	74.661	ENSSHAG00000007153	RAB3D	96	74.661	Sarcophilus_harrisii