EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019277 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: mRNA decay activator protein ZFP36-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2950 bases
Position: chrLWHD01000470.1:70970-73919
Accession: 108249611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026001	zf-CCCH	PF00642.24	6.4e-21	1	2
ENSKMAP00000026001	zf-CCCH	PF00642.24	6.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026327	-	2611	XM_017439096	ENSKMAP00000026001	420 (aa)	XP_017294585	UPI0007F8D610

Gene Model

Click here to download ENSKMAG00000019277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019277	zgc:162730	84	37.403	ENSKMAG00000009884	sb:cb81	85	37.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019277	zgc:162730	100	77.336	ENSAPOG00000014920	zgc:162730	100	77.804	Acanthochromis_polyacanthus
ENSKMAG00000019277	zgc:162730	58	63.968	ENSACIG00000017366	zgc:162730	97	63.968	Amphilophus_citrinellus
ENSKMAG00000019277	zgc:162730	85	35.753	ENSAOCG00000024158	sb:cb81	84	38.235	Amphiprion_ocellaris
ENSKMAG00000019277	zgc:162730	100	76.636	ENSAOCG00000002001	zgc:162730	100	77.804	Amphiprion_ocellaris
ENSKMAG00000019277	zgc:162730	85	35.753	ENSAPEG00000022405	sb:cb81	84	38.235	Amphiprion_percula
ENSKMAG00000019277	zgc:162730	94	77.419	ENSAPEG00000015490	zgc:162730	99	78.660	Amphiprion_percula
ENSKMAG00000019277	zgc:162730	100	69.930	ENSATEG00000008790	zgc:162730	100	72.727	Anabas_testudineus
ENSKMAG00000019277	zgc:162730	81	37.666	ENSATEG00000003462	sb:cb81	79	37.067	Anabas_testudineus
ENSKMAG00000019277	zgc:162730	100	70.726	ENSACLG00000022112	zgc:162730	100	70.960	Astatotilapia_calliptera
ENSKMAG00000019277	zgc:162730	100	44.208	ENSAMXG00000035945	zgc:162730	91	47.493	Astyanax_mexicanus
ENSKMAG00000019277	zgc:162730	69	42.244	ENSAMXG00000034874	sb:cb81	84	38.693	Astyanax_mexicanus
ENSKMAG00000019277	zgc:162730	65	36.644	ENSCSEG00000018290	zgc:114130	60	38.267	Cynoglossus_semilaevis
ENSKMAG00000019277	zgc:162730	85	37.469	ENSCSEG00000014426	sb:cb81	73	38.095	Cynoglossus_semilaevis
ENSKMAG00000019277	zgc:162730	97	69.524	ENSCSEG00000018283	zgc:162730	100	63.679	Cynoglossus_semilaevis
ENSKMAG00000019277	zgc:162730	100	75.177	ENSCVAG00000018571	zgc:162730	100	75.177	Cyprinodon_variegatus
ENSKMAG00000019277	zgc:162730	98	34.483	ENSDARG00000040503	sb:cb81	78	39.106	Danio_rerio
ENSKMAG00000019277	zgc:162730	79	47.801	ENSDARG00000103720	zgc:162730	84	49.267	Danio_rerio
ENSKMAG00000019277	zgc:162730	70	35.505	ENSDARG00000040725	zgc:114130	53	40.773	Danio_rerio
ENSKMAG00000019277	zgc:162730	100	51.522	ENSELUG00000013158	zgc:162730	100	51.991	Esox_lucius
ENSKMAG00000019277	zgc:162730	84	35.602	ENSELUG00000013045	sb:cb81	78	37.430	Esox_lucius
ENSKMAG00000019277	zgc:162730	100	76.596	ENSFHEG00000013710	zgc:162730	100	76.832	Fundulus_heteroclitus
ENSKMAG00000019277	zgc:162730	66	35.069	ENSGMOG00000016803	sb:cb81	91	40.138	Gadus_morhua
ENSKMAG00000019277	zgc:162730	79	63.127	ENSGMOG00000017242	zgc:162730	100	63.717	Gadus_morhua
ENSKMAG00000019277	zgc:162730	100	76.832	ENSGAFG00000009953	zgc:162730	100	77.069	Gambusia_affinis
ENSKMAG00000019277	zgc:162730	79	67.544	ENSGACG00000008351	zgc:162730	100	68.129	Gasterosteus_aculeatus
ENSKMAG00000019277	zgc:162730	83	35.638	ENSGACG00000013400	sb:cb81	98	36.170	Gasterosteus_aculeatus
ENSKMAG00000019277	zgc:162730	100	70.960	ENSHBUG00000015057	zgc:162730	100	71.194	Haplochromis_burtoni
ENSKMAG00000019277	zgc:162730	55	39.759	ENSHCOG00000015800	zgc:114130	56	40.637	Hippocampus_comes
ENSKMAG00000019277	zgc:162730	100	67.206	ENSHCOG00000015801	zgc:162730	100	67.667	Hippocampus_comes
ENSKMAG00000019277	zgc:162730	100	45.305	ENSIPUG00000018248	zgc:162730	88	49.593	Ictalurus_punctatus
ENSKMAG00000019277	zgc:162730	52	47.788	ENSIPUG00000011378	sb:cb81	58	47.186	Ictalurus_punctatus
ENSKMAG00000019277	zgc:162730	57	39.850	ENSLBEG00000018387	zgc:114130	63	40.345	Labrus_bergylta
ENSKMAG00000019277	zgc:162730	100	70.507	ENSLBEG00000018380	zgc:162730	100	70.968	Labrus_bergylta
ENSKMAG00000019277	zgc:162730	100	32.886	ENSLACG00000015980	-	87	37.696	Latimeria_chalumnae
ENSKMAG00000019277	zgc:162730	98	36.279	ENSLACG00000015732	sb:cb81	85	38.992	Latimeria_chalumnae
ENSKMAG00000019277	zgc:162730	100	47.319	ENSLOCG00000014597	zgc:162730	92	49.246	Lepisosteus_oculatus
ENSKMAG00000019277	zgc:162730	99	38.407	ENSLOCG00000014587	sb:cb81	81	42.359	Lepisosteus_oculatus
ENSKMAG00000019277	zgc:162730	72	36.449	ENSMAMG00000007511	zgc:114130	64	40.614	Mastacembelus_armatus
ENSKMAG00000019277	zgc:162730	100	71.926	ENSMAMG00000007516	zgc:162730	99	73.086	Mastacembelus_armatus
ENSKMAG00000019277	zgc:162730	100	63.615	ENSMZEG00005014415	zgc:162730	100	63.615	Maylandia_zebra
ENSKMAG00000019277	zgc:162730	59	70.196	ENSMMOG00000011506	zgc:162730	99	70.980	Mola_mola
ENSKMAG00000019277	zgc:162730	65	39.161	ENSMMOG00000010073	sb:cb81	66	40.647	Mola_mola
ENSKMAG00000019277	zgc:162730	100	68.981	ENSMALG00000002348	zgc:162730	100	70.139	Monopterus_albus
ENSKMAG00000019277	zgc:162730	100	70.726	ENSNBRG00000013701	zgc:162730	100	70.960	Neolamprologus_brichardi
ENSKMAG00000019277	zgc:162730	82	65.903	ENSONIG00000005003	zgc:162730	99	68.481	Oreochromis_niloticus
ENSKMAG00000019277	zgc:162730	99	62.207	ENSORLG00000027149	zgc:162730	100	62.676	Oryzias_latipes
ENSKMAG00000019277	zgc:162730	57	42.742	ENSORLG00000024026	sb:cb81	69	41.530	Oryzias_latipes
ENSKMAG00000019277	zgc:162730	57	41.700	ENSORLG00020021084	sb:cb81	80	42.105	Oryzias_latipes_hni
ENSKMAG00000019277	zgc:162730	99	62.441	ENSORLG00020020289	zgc:162730	100	62.911	Oryzias_latipes_hni
ENSKMAG00000019277	zgc:162730	57	41.700	ENSORLG00015010105	sb:cb81	80	41.551	Oryzias_latipes_hsok
ENSKMAG00000019277	zgc:162730	99	62.763	ENSORLG00015001519	zgc:162730	100	62.998	Oryzias_latipes_hsok
ENSKMAG00000019277	zgc:162730	99	64.858	ENSOMEG00000017752	zgc:162730	100	65.566	Oryzias_melastigma
ENSKMAG00000019277	zgc:162730	57	42.276	ENSOMEG00000020565	sb:cb81	79	41.226	Oryzias_melastigma
ENSKMAG00000019277	zgc:162730	100	76.596	ENSPFOG00000003665	zgc:162730	100	76.832	Poecilia_formosa
ENSKMAG00000019277	zgc:162730	65	38.182	ENSPFOG00000017436	zfp36l1a	61	38.909	Poecilia_formosa
ENSKMAG00000019277	zgc:162730	66	39.394	ENSPFOG00000013806	sb:cb81	78	39.452	Poecilia_formosa
ENSKMAG00000019277	zgc:162730	100	76.832	ENSPLAG00000000946	zgc:162730	100	77.069	Poecilia_latipinna
ENSKMAG00000019277	zgc:162730	66	39.394	ENSPMEG00000022425	sb:cb81	78	39.452	Poecilia_mexicana
ENSKMAG00000019277	zgc:162730	100	77.069	ENSPMEG00000000341	zgc:162730	100	77.305	Poecilia_mexicana
ENSKMAG00000019277	zgc:162730	100	77.069	ENSPREG00000021263	zgc:162730	100	77.305	Poecilia_reticulata
ENSKMAG00000019277	zgc:162730	100	70.726	ENSPNYG00000015553	zgc:162730	100	70.960	Pundamilia_nyererei
ENSKMAG00000019277	zgc:162730	98	37.123	ENSPNAG00000030063	sb:cb81	82	40.327	Pygocentrus_nattereri
ENSKMAG00000019277	zgc:162730	100	44.340	ENSPNAG00000023018	zgc:162730	91	47.409	Pygocentrus_nattereri
ENSKMAG00000019277	zgc:162730	52	40.598	ENSSFOG00015003179	sb:cb81	78	34.903	Scleropages_formosus
ENSKMAG00000019277	zgc:162730	100	70.998	ENSSMAG00000018612	zgc:162730	100	71.462	Scophthalmus_maximus
ENSKMAG00000019277	zgc:162730	70	38.820	ENSSDUG00000002237	zgc:114130	50	43.182	Seriola_dumerili
ENSKMAG00000019277	zgc:162730	100	75.576	ENSSDUG00000002247	zgc:162730	100	76.037	Seriola_dumerili
ENSKMAG00000019277	zgc:162730	70	38.318	ENSSLDG00000008496	zgc:114130	61	39.925	Seriola_lalandi_dorsalis
ENSKMAG00000019277	zgc:162730	100	75.115	ENSSLDG00000008502	zgc:162730	100	75.576	Seriola_lalandi_dorsalis
ENSKMAG00000019277	zgc:162730	100	77.570	ENSSPAG00000006851	zgc:162730	100	78.037	Stegastes_partitus
ENSKMAG00000019277	zgc:162730	65	38.298	ENSSPAG00000013546	sb:cb81	81	37.669	Stegastes_partitus
ENSKMAG00000019277	zgc:162730	100	68.384	ENSTRUG00000021229	zgc:162730	100	68.852	Takifugu_rubripes
ENSKMAG00000019277	zgc:162730	94	62.035	ENSTNIG00000000183	zgc:162730	98	64.764	Tetraodon_nigroviridis
ENSKMAG00000019277	zgc:162730	100	76.832	ENSXCOG00000012791	zgc:162730	100	77.069	Xiphophorus_couchianus
ENSKMAG00000019277	zgc:162730	65	39.130	ENSXMAG00000022234	zfp36l1a	61	38.909	Xiphophorus_maculatus
ENSKMAG00000019277	zgc:162730	100	76.832	ENSXMAG00000018206	zgc:162730	100	77.069	Xiphophorus_maculatus