EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019287 (Gene tree)
Gene ID: 108249613
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: mRNA decay activator protein ZFP36-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5099 bases
Position: chrLWHD01000470.1:103959-109057
Accession: 108249613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026012	zf-CCCH	PF00642.24	1.7e-20	1	2
ENSKMAP00000026012	zf-CCCH	PF00642.24	1.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026338	-	3054	XM_017439097	ENSKMAP00000026012	431 (aa)	XP_017294586	UPI0007F90311

Gene Model

Click here to download ENSKMAG00000019287's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019287	zgc:114130	62	40.071	ENSKMAG00000009884	sb:cb81	64	41.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019287	zgc:114130	100	70.337	ENSAPOG00000014912	zgc:114130	100	70.562	Acanthochromis_polyacanthus
ENSKMAG00000019287	zgc:114130	62	41.237	ENSACIG00000009027	sb:cb81	64	41.000	Amphilophus_citrinellus
ENSKMAG00000019287	zgc:114130	84	70.137	ENSACIG00000017364	zgc:114130	99	70.137	Amphilophus_citrinellus
ENSKMAG00000019287	zgc:114130	51	41.593	ENSAOCG00000024158	sb:cb81	65	37.801	Amphiprion_ocellaris
ENSKMAG00000019287	zgc:114130	100	69.820	ENSAOCG00000022227	zgc:114130	100	70.562	Amphiprion_ocellaris
ENSKMAG00000019287	zgc:114130	100	71.011	ENSAPEG00000015497	zgc:114130	100	71.011	Amphiprion_percula
ENSKMAG00000019287	zgc:114130	50	41.704	ENSAPEG00000022405	sb:cb81	65	37.801	Amphiprion_percula
ENSKMAG00000019287	zgc:114130	62	39.145	ENSATEG00000003462	sb:cb81	64	40.789	Anabas_testudineus
ENSKMAG00000019287	zgc:114130	100	63.496	ENSATEG00000008781	zgc:114130	100	65.044	Anabas_testudineus
ENSKMAG00000019287	zgc:114130	100	66.667	ENSACLG00000022113	zgc:114130	100	67.568	Astatotilapia_calliptera
ENSKMAG00000019287	zgc:114130	62	40.604	ENSACLG00000013759	sb:cb81	64	41.000	Astatotilapia_calliptera
ENSKMAG00000019287	zgc:114130	65	42.069	ENSAMXG00000034874	sb:cb81	69	43.103	Astyanax_mexicanus
ENSKMAG00000019287	zgc:114130	99	42.188	ENSAMXG00000038581	zgc:114130	96	44.222	Astyanax_mexicanus
ENSKMAG00000019287	zgc:114130	100	62.444	ENSCSEG00000018290	zgc:114130	100	62.222	Cynoglossus_semilaevis
ENSKMAG00000019287	zgc:114130	98	66.364	ENSCVAG00000018574	zgc:114130	100	66.591	Cyprinodon_variegatus
ENSKMAG00000019287	zgc:114130	62	42.140	ENSCVAG00000009207	sb:cb81	64	42.140	Cyprinodon_variegatus
ENSKMAG00000019287	zgc:114130	99	36.281	ENSDARG00000040503	sb:cb81	76	40.752	Danio_rerio
ENSKMAG00000019287	zgc:114130	99	45.995	ENSDARG00000040725	zgc:114130	96	45.995	Danio_rerio
ENSKMAG00000019287	zgc:114130	99	38.600	ENSELUG00000013045	sb:cb81	73	41.270	Esox_lucius
ENSKMAG00000019287	zgc:114130	99	46.341	ENSELUG00000013151	zgc:114130	97	47.738	Esox_lucius
ENSKMAG00000019287	zgc:114130	62	40.667	ENSFHEG00000022187	sb:cb81	64	40.199	Fundulus_heteroclitus
ENSKMAG00000019287	zgc:114130	98	62.217	ENSFHEG00000000656	zgc:114130	100	63.122	Fundulus_heteroclitus
ENSKMAG00000019287	zgc:114130	78	55.294	ENSGMOG00000017223	zgc:114130	99	56.322	Gadus_morhua
ENSKMAG00000019287	zgc:114130	81	67.232	ENSGAFG00000009949	zgc:114130	94	66.949	Gambusia_affinis
ENSKMAG00000019287	zgc:114130	62	39.519	ENSGAFG00000015700	sb:cb81	64	39.519	Gambusia_affinis
ENSKMAG00000019287	zgc:114130	78	68.023	ENSGACG00000008344	zgc:114130	99	68.023	Gasterosteus_aculeatus
ENSKMAG00000019287	zgc:114130	100	67.347	ENSHBUG00000015051	zgc:114130	100	68.243	Haplochromis_burtoni
ENSKMAG00000019287	zgc:114130	62	40.199	ENSHBUG00000002383	sb:cb81	65	41.914	Haplochromis_burtoni
ENSKMAG00000019287	zgc:114130	60	42.146	ENSHCOG00000000792	sb:cb81	52	40.794	Hippocampus_comes
ENSKMAG00000019287	zgc:114130	100	58.636	ENSHCOG00000015800	zgc:114130	98	58.957	Hippocampus_comes
ENSKMAG00000019287	zgc:114130	98	43.192	ENSIPUG00000018256	zgc:114130	79	43.192	Ictalurus_punctatus
ENSKMAG00000019287	zgc:114130	60	41.697	ENSIPUG00000011378	sb:cb81	68	40.659	Ictalurus_punctatus
ENSKMAG00000019287	zgc:114130	100	61.298	ENSLBEG00000018387	zgc:114130	100	62.416	Labrus_bergylta
ENSKMAG00000019287	zgc:114130	62	40.134	ENSLBEG00000018376	sb:cb81	67	39.806	Labrus_bergylta
ENSKMAG00000019287	zgc:114130	99	36.222	ENSLACG00000015732	sb:cb81	100	37.385	Latimeria_chalumnae
ENSKMAG00000019287	zgc:114130	60	44.689	ENSLOCG00000014587	sb:cb81	64	44.643	Lepisosteus_oculatus
ENSKMAG00000019287	zgc:114130	100	66.441	ENSMAMG00000007511	zgc:114130	98	67.342	Mastacembelus_armatus
ENSKMAG00000019287	zgc:114130	62	39.933	ENSMZEG00005016001	-	64	40.333	Maylandia_zebra
ENSKMAG00000019287	zgc:114130	100	66.893	ENSMZEG00005014410	zgc:114130	100	67.793	Maylandia_zebra
ENSKMAG00000019287	zgc:114130	62	39.799	ENSMZEG00005024684	sb:cb81	64	38.689	Maylandia_zebra
ENSKMAG00000019287	zgc:114130	84	67.838	ENSMMOG00000011504	zgc:114130	97	68.108	Mola_mola
ENSKMAG00000019287	zgc:114130	64	64.286	ENSMALG00000021140	-	98	65.854	Monopterus_albus
ENSKMAG00000019287	zgc:114130	81	66.102	ENSNBRG00000013703	zgc:114130	98	65.915	Neolamprologus_brichardi
ENSKMAG00000019287	zgc:114130	78	67.919	ENSONIG00000005004	zgc:114130	99	68.328	Oreochromis_niloticus
ENSKMAG00000019287	zgc:114130	62	39.116	ENSONIG00000001259	sb:cb81	65	41.254	Oreochromis_niloticus
ENSKMAG00000019287	zgc:114130	62	40.780	ENSORLG00000024026	sb:cb81	54	39.116	Oryzias_latipes
ENSKMAG00000019287	zgc:114130	62	40.071	ENSORLG00020021084	sb:cb81	63	41.259	Oryzias_latipes_hni
ENSKMAG00000019287	zgc:114130	62	40.214	ENSORLG00015010105	sb:cb81	63	38.014	Oryzias_latipes_hsok
ENSKMAG00000019287	zgc:114130	62	39.362	ENSOMEG00000020565	sb:cb81	65	38.567	Oryzias_melastigma
ENSKMAG00000019287	zgc:114130	62	39.929	ENSPFOG00000013806	sb:cb81	64	40.141	Poecilia_formosa
ENSKMAG00000019287	zgc:114130	98	67.191	ENSPFOG00000003653	zgc:114130	100	68.767	Poecilia_formosa
ENSKMAG00000019287	zgc:114130	98	67.946	ENSPLAG00000000947	zgc:114130	100	68.552	Poecilia_latipinna
ENSKMAG00000019287	zgc:114130	98	66.517	ENSPMEG00000015335	zgc:114130	100	66.667	Poecilia_mexicana
ENSKMAG00000019287	zgc:114130	62	39.929	ENSPMEG00000022425	sb:cb81	64	40.141	Poecilia_mexicana
ENSKMAG00000019287	zgc:114130	98	68.326	ENSPREG00000021254	zgc:114130	100	69.005	Poecilia_reticulata
ENSKMAG00000019287	zgc:114130	62	40.636	ENSPREG00000017495	sb:cb81	64	40.070	Poecilia_reticulata
ENSKMAG00000019287	zgc:114130	62	41.637	ENSPNYG00000007502	sb:cb81	63	42.049	Pundamilia_nyererei
ENSKMAG00000019287	zgc:114130	100	66.818	ENSPNYG00000015546	zgc:114130	100	68.243	Pundamilia_nyererei
ENSKMAG00000019287	zgc:114130	99	39.636	ENSPNAG00000023029	zgc:114130	97	40.716	Pygocentrus_nattereri
ENSKMAG00000019287	zgc:114130	65	41.497	ENSPNAG00000030063	sb:cb81	70	42.230	Pygocentrus_nattereri
ENSKMAG00000019287	zgc:114130	98	34.459	ENSSFOG00015003179	sb:cb81	99	33.857	Scleropages_formosus
ENSKMAG00000019287	zgc:114130	53	42.500	ENSSMAG00000018208	-	64	41.667	Scophthalmus_maximus
ENSKMAG00000019287	zgc:114130	98	64.679	ENSSMAG00000018621	zgc:114130	95	66.055	Scophthalmus_maximus
ENSKMAG00000019287	zgc:114130	98	69.635	ENSSDUG00000002237	zgc:114130	100	69.406	Seriola_dumerili
ENSKMAG00000019287	zgc:114130	98	69.794	ENSSLDG00000008496	zgc:114130	100	69.565	Seriola_lalandi_dorsalis
ENSKMAG00000019287	zgc:114130	58	38.168	ENSSPAG00000013546	sb:cb81	100	33.761	Stegastes_partitus
ENSKMAG00000019287	zgc:114130	100	70.112	ENSSPAG00000006856	zgc:114130	100	70.337	Stegastes_partitus
ENSKMAG00000019287	zgc:114130	61	41.667	ENSTRUG00000020720	sb:cb81	100	36.207	Takifugu_rubripes
ENSKMAG00000019287	zgc:114130	100	60.444	ENSTRUG00000022473	zgc:114130	100	60.714	Takifugu_rubripes
ENSKMAG00000019287	zgc:114130	64	41.155	ENSXETG00000016987	zfp36l1	67	40.876	Xenopus_tropicalis
ENSKMAG00000019287	zgc:114130	89	59.487	ENSXCOG00000012792	zgc:114130	96	59.231	Xiphophorus_couchianus
ENSKMAG00000019287	zgc:114130	62	38.567	ENSXMAG00000004681	sb:cb81	64	38.567	Xiphophorus_maculatus
ENSKMAG00000019287	zgc:114130	98	68.778	ENSXMAG00000026836	zgc:114130	100	68.934	Xiphophorus_maculatus