EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019341 (Gene tree)
Gene ID: 108248419
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6971 bases
Position: chrLWHD01000343.1:251151-258121
Accession: 108248419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026084	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026411	-	967	XM_017437183	ENSKMAP00000026084	252 (aa)	XP_017292672	UPI0007F8F53E

Gene Model

Click here to download ENSKMAG00000019341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019341	rab34b	83	33.484	ENSKMAG00000012657	-	96	33.484
ENSKMAG00000019341	rab34b	66	38.323	ENSKMAG00000011301	-	76	38.323
ENSKMAG00000019341	rab34b	63	33.750	ENSKMAG00000020038	rab5c	88	31.034
ENSKMAG00000019341	rab34b	77	37.113	ENSKMAG00000001908	rab13	93	37.113
ENSKMAG00000019341	rab34b	83	32.093	ENSKMAG00000015488	rab25b	97	32.093
ENSKMAG00000019341	rab34b	64	38.509	ENSKMAG00000006810	rab1ba	79	38.509
ENSKMAG00000019341	rab34b	68	31.429	ENSKMAG00000006812	RAB7A	84	31.429
ENSKMAG00000019341	rab34b	63	31.875	ENSKMAG00000014705	rab22a	81	31.875
ENSKMAG00000019341	rab34b	81	31.163	ENSKMAG00000006170	-	93	31.163
ENSKMAG00000019341	rab34b	66	37.725	ENSKMAG00000020392	rab15	77	37.725
ENSKMAG00000019341	rab34b	59	35.570	ENSKMAG00000018270	rab23	66	37.500
ENSKMAG00000019341	rab34b	53	38.806	ENSKMAG00000006593	rab33a	63	38.806
ENSKMAG00000019341	rab34b	68	33.721	ENSKMAG00000003494	si:dkey-16l2.16	98	32.701
ENSKMAG00000019341	rab34b	63	35.625	ENSKMAG00000020056	rab12	66	35.625
ENSKMAG00000019341	rab34b	64	39.130	ENSKMAG00000015507	rab6ba	76	39.130
ENSKMAG00000019341	rab34b	81	35.885	ENSKMAG00000009856	zgc:171927	96	35.885
ENSKMAG00000019341	rab34b	51	37.313	ENSKMAG00000017150	-	60	37.313
ENSKMAG00000019341	rab34b	81	35.377	ENSKMAG00000017487	rab14	95	35.377
ENSKMAG00000019341	rab34b	64	39.130	ENSKMAG00000014038	-	75	39.130
ENSKMAG00000019341	rab34b	64	38.509	ENSKMAG00000017357	rab1ab	78	38.509
ENSKMAG00000019341	rab34b	65	36.364	ENSKMAG00000009799	rab2a	76	36.364
ENSKMAG00000019341	rab34b	100	64.591	ENSKMAG00000019647	rab34a	96	64.591
ENSKMAG00000019341	rab34b	73	32.609	ENSKMAG00000007364	rab18b	88	32.609
ENSKMAG00000019341	rab34b	61	40.523	ENSKMAG00000013146	-	78	40.523
ENSKMAG00000019341	rab34b	64	40.373	ENSKMAG00000002545	-	75	40.373
ENSKMAG00000019341	rab34b	76	36.458	ENSKMAG00000008625	RAB39B	84	36.458
ENSKMAG00000019341	rab34b	60	35.256	ENSKMAG00000019964	rab9b	76	35.256
ENSKMAG00000019341	rab34b	66	37.725	ENSKMAG00000001191	RAB15	78	37.725
ENSKMAG00000019341	rab34b	81	35.610	ENSKMAG00000006854	rab35b	96	35.610
ENSKMAG00000019341	rab34b	78	33.163	ENSKMAG00000006082	-	82	33.163
ENSKMAG00000019341	rab34b	67	32.948	ENSKMAG00000021039	si:dkey-13a21.4	71	32.948
ENSKMAG00000019341	rab34b	81	30.918	ENSKMAG00000003646	-	97	30.918
ENSKMAG00000019341	rab34b	81	30.049	ENSKMAG00000017417	-	88	30.049
ENSKMAG00000019341	rab34b	68	33.526	ENSKMAG00000007267	rab42a	78	33.526
ENSKMAG00000019341	rab34b	81	30.806	ENSKMAG00000012778	si:dkey-34d22.5	95	30.806
ENSKMAG00000019341	rab34b	68	31.429	ENSKMAG00000020013	-	84	31.429
ENSKMAG00000019341	rab34b	63	39.130	ENSKMAG00000004439	rab30	77	39.130
ENSKMAG00000019341	rab34b	81	31.034	ENSKMAG00000005111	rab5aa	89	31.034
ENSKMAG00000019341	rab34b	65	31.515	ENSKMAG00000018973	-	73	31.515
ENSKMAG00000019341	rab34b	50	39.683	ENSKMAG00000004945	rab25a	59	39.683
ENSKMAG00000019341	rab34b	70	34.637	ENSKMAG00000020250	rab4a	83	34.637
ENSKMAG00000019341	rab34b	81	32.692	ENSKMAG00000015516	rab11al	93	32.692
ENSKMAG00000019341	rab34b	81	31.068	ENSKMAG00000009033	rab11bb	93	31.068
ENSKMAG00000019341	rab34b	64	39.752	ENSKMAG00000011278	rab6bb	76	39.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019341	rab34b	85	88.372	ENSAPOG00000019147	rab34b	95	77.778	Acanthochromis_polyacanthus
ENSKMAG00000019341	rab34b	100	75.000	ENSACIG00000004859	rab34b	99	75.000	Amphilophus_citrinellus
ENSKMAG00000019341	rab34b	99	82.812	ENSAOCG00000007106	rab34b	93	82.812	Amphiprion_ocellaris
ENSKMAG00000019341	rab34b	88	87.054	ENSAPEG00000018607	rab34b	86	82.988	Amphiprion_percula
ENSKMAG00000019341	rab34b	94	82.917	ENSATEG00000006851	rab34b	94	82.917	Anabas_testudineus
ENSKMAG00000019341	rab34b	100	88.189	ENSACLG00000005733	rab34b	96	88.189	Astatotilapia_calliptera
ENSKMAG00000019341	rab34b	99	72.727	ENSAMXG00000006018	rab34b	98	72.727	Astyanax_mexicanus
ENSKMAG00000019341	rab34b	92	80.932	ENSCSEG00000018133	rab34b	94	80.932	Cynoglossus_semilaevis
ENSKMAG00000019341	rab34b	99	76.892	ENSDARG00000010977	rab34b	98	76.892	Danio_rerio
ENSKMAG00000019341	rab34b	100	81.569	ENSELUG00000005597	rab34b	99	81.569	Esox_lucius
ENSKMAG00000019341	rab34b	100	88.189	ENSFHEG00000004532	rab34b	100	88.189	Fundulus_heteroclitus
ENSKMAG00000019341	rab34b	82	79.710	ENSGMOG00000007140	rab34b	100	79.710	Gadus_morhua
ENSKMAG00000019341	rab34b	100	85.882	ENSGACG00000020514	rab34b	99	85.882	Gasterosteus_aculeatus
ENSKMAG00000019341	rab34b	99	70.916	ENSIPUG00000024531	rab34	98	70.916	Ictalurus_punctatus
ENSKMAG00000019341	rab34b	100	83.137	ENSLBEG00000027819	rab34b	100	83.137	Labrus_bergylta
ENSKMAG00000019341	rab34b	100	85.882	ENSMAMG00000020214	rab34b	100	85.882	Mastacembelus_armatus
ENSKMAG00000019341	rab34b	100	81.102	ENSMMOG00000010936	rab34b	86	81.102	Mola_mola
ENSKMAG00000019341	rab34b	92	86.017	ENSMALG00000018499	rab34b	88	86.017	Monopterus_albus
ENSKMAG00000019341	rab34b	100	88.189	ENSONIG00000005519	rab34b	100	88.189	Oreochromis_niloticus
ENSKMAG00000019341	rab34b	100	85.827	ENSORLG00000003119	rab34b	92	85.827	Oryzias_latipes
ENSKMAG00000019341	rab34b	100	86.220	ENSORLG00020016139	rab34b	92	86.220	Oryzias_latipes_hni
ENSKMAG00000019341	rab34b	100	85.827	ENSORLG00015000584	rab34b	92	85.827	Oryzias_latipes_hsok
ENSKMAG00000019341	rab34b	100	87.008	ENSOMEG00000010334	rab34b	98	85.185	Oryzias_melastigma
ENSKMAG00000019341	rab34b	99	68.898	ENSPKIG00000013326	rab34b	98	68.898	Paramormyrops_kingsleyae
ENSKMAG00000019341	rab34b	100	81.102	ENSPMGG00000021697	rab34b	99	81.102	Periophthalmus_magnuspinnatus
ENSKMAG00000019341	rab34b	100	89.370	ENSPFOG00000011444	rab34b	99	89.370	Poecilia_formosa
ENSKMAG00000019341	rab34b	100	89.370	ENSPLAG00000005074	rab34b	100	89.370	Poecilia_latipinna
ENSKMAG00000019341	rab34b	100	89.370	ENSPMEG00000013297	rab34b	100	89.370	Poecilia_mexicana
ENSKMAG00000019341	rab34b	100	88.976	ENSPREG00000009813	rab34b	100	88.976	Poecilia_reticulata
ENSKMAG00000019341	rab34b	100	77.381	ENSPNYG00000017153	rab34b	99	90.395	Pundamilia_nyererei
ENSKMAG00000019341	rab34b	93	73.840	ENSPNAG00000015040	rab34b	99	73.840	Pygocentrus_nattereri
ENSKMAG00000019341	rab34b	100	71.484	ENSSFOG00015005188	rab34	99	71.484	Scleropages_formosus
ENSKMAG00000019341	rab34b	97	80.972	ENSSMAG00000019926	rab34b	100	80.932	Scophthalmus_maximus
ENSKMAG00000019341	rab34b	100	88.235	ENSSDUG00000016760	rab34b	80	88.235	Seriola_dumerili
ENSKMAG00000019341	rab34b	72	90.761	ENSSLDG00000014812	rab34b	90	90.761	Seriola_lalandi_dorsalis
ENSKMAG00000019341	rab34b	100	83.465	ENSSPAG00000002801	rab34b	100	83.465	Stegastes_partitus
ENSKMAG00000019341	rab34b	96	81.070	ENSTRUG00000014481	rab34b	98	81.070	Takifugu_rubripes
ENSKMAG00000019341	rab34b	100	80.392	ENSTNIG00000016158	rab34b	99	80.392	Tetraodon_nigroviridis