EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSKMAG00000019429 (Gene tree)
Gene ID
108233329
Gene Symbol
cpsf2
Alias
zgc:92484
Full Name
cleavage and polyadenylation specific factor 2
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Minus strand
Length
8723 bases
Position
chrLWHD01000021.1:2428062-2436784
Accession
108233329
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000026238Beta-CaspPF10996.81.4e-2011
ENSKMAP00000026238Lactamase_BPF00753.274.1e-0611
ENSKMAP00000026238RMMBLPF07521.126.1e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000026569-3606XM_017411726ENSKMAP00000026238787 (aa)XP_017267215UPI0007F92DF7
Gene Model
Click here to download ENSKMAG00000019429's gene model file
Pathways
Pathway IDPathway NameSource
kmr03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019429's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000019429cpsf210084.664ENSG00000165934CPSF210090.000Homo_sapiens
ENSKMAG00000019429cpsf210094.536ENSAPOG00000001242cpsf210094.536Acanthochromis_polyacanthus
ENSKMAG00000019429cpsf210094.416ENSACIG00000009331cpsf210094.416Amphilophus_citrinellus
ENSKMAG00000019429cpsf210094.917ENSAOCG00000014095cpsf210094.917Amphiprion_ocellaris
ENSKMAG00000019429cpsf210094.917ENSAPEG00000009158cpsf210094.917Amphiprion_percula
ENSKMAG00000019429cpsf29793.229ENSATEG00000017644cpsf29993.121Anabas_testudineus
ENSKMAG00000019429cpsf210084.177ENSAPLG00000006330CPSF210084.177Anas_platyrhynchos
ENSKMAG00000019429cpsf210084.157ENSACAG00000009245CPSF210084.157Anolis_carolinensis
ENSKMAG00000019429cpsf210084.918ENSANAG00000022915CPSF210084.918Aotus_nancymaae
ENSKMAG00000019429cpsf210087.959ENSAMXG00000018696cpsf210087.959Astyanax_mexicanus
ENSKMAG00000019429cpsf210084.791ENSBTAG00000010227CPSF210084.791Bos_taurus
ENSKMAG00000019429cpsf210041.367WBGene00017313cpsf-210041.726Caenorhabditis_elegans
ENSKMAG00000019429cpsf210084.918ENSCJAG00000018069CPSF210084.918Callithrix_jacchus
ENSKMAG00000019429cpsf210084.664ENSCAFG00000010909CPSF210084.664Canis_familiaris
ENSKMAG00000019429cpsf210084.664ENSCAFG00020020670CPSF210084.664Canis_lupus_dingo
ENSKMAG00000019429cpsf210084.791ENSCHIG00000023848CPSF210084.791Capra_hircus
ENSKMAG00000019429cpsf210084.791ENSTSYG00000009036CPSF210084.791Carlito_syrichta
ENSKMAG00000019429cpsf210084.791ENSCPOG00000010899CPSF210084.791Cavia_porcellus
ENSKMAG00000019429cpsf210084.918ENSCCAG00000028088CPSF210084.918Cebus_capucinus
ENSKMAG00000019429cpsf210084.791ENSCATG00000030132CPSF210084.791Cercocebus_atys
ENSKMAG00000019429cpsf210084.918ENSCLAG00000012404CPSF210084.918Chinchilla_lanigera
ENSKMAG00000019429cpsf210084.791ENSCSAG00000011300CPSF210084.791Chlorocebus_sabaeus
ENSKMAG00000019429cpsf210079.214ENSCHOG00000012904CPSF210079.214Choloepus_hoffmanni
ENSKMAG00000019429cpsf210084.411ENSCPBG00000008766CPSF29784.411Chrysemys_picta_bellii
ENSKMAG00000019429cpsf210053.483ENSCING00000007881-10052.985Ciona_intestinalis
ENSKMAG00000019429cpsf29484.595ENSCANG00000041651CPSF210084.574Colobus_angolensis_palliatus
ENSKMAG00000019429cpsf210084.537ENSCGRG00001006901Cpsf210084.537Cricetulus_griseus_chok1gshd
ENSKMAG00000019429cpsf210084.537ENSCGRG00000012416Cpsf210084.537Cricetulus_griseus_crigri
ENSKMAG00000019429cpsf210091.878ENSCSEG00000004116cpsf210091.878Cynoglossus_semilaevis
ENSKMAG00000019429cpsf210094.790ENSCVAG00000000095cpsf210094.790Cyprinodon_variegatus
ENSKMAG00000019429cpsf210086.962ENSDARG00000028971cpsf210086.962Danio_rerio
ENSKMAG00000019429cpsf210084.918ENSDNOG00000042757CPSF210084.918Dasypus_novemcinctus
ENSKMAG00000019429cpsf210084.791ENSDORG00000013709Cpsf210084.791Dipodomys_ordii
ENSKMAG00000019429cpsf210054.151FBgn0027873Cpsf10010054.275Drosophila_melanogaster
ENSKMAG00000019429cpsf210077.089ENSETEG00000012123CPSF210077.089Echinops_telfairi
ENSKMAG00000019429cpsf25276.284ENSEBUG00000012098cpsf29376.284Eptatretus_burgeri
ENSKMAG00000019429cpsf28990.785ENSEASG00005021193CPSF210090.785Equus_asinus_asinus
ENSKMAG00000019429cpsf210084.664ENSECAG00000023935CPSF210084.664Equus_caballus
ENSKMAG00000019429cpsf210088.191ENSELUG00000008442cpsf210088.191Esox_lucius
ENSKMAG00000019429cpsf210084.664ENSFCAG00000007886CPSF210084.664Felis_catus
ENSKMAG00000019429cpsf210084.645ENSFALG00000002412CPSF210084.645Ficedula_albicollis
ENSKMAG00000019429cpsf210084.664ENSFDAG00000006327CPSF210084.664Fukomys_damarensis
ENSKMAG00000019429cpsf29692.801ENSFHEG00000015465cpsf29893.586Fundulus_heteroclitus
ENSKMAG00000019429cpsf210088.510ENSGMOG00000008761cpsf210088.510Gadus_morhua
ENSKMAG00000019429cpsf210084.645ENSGALG00000010783CPSF210084.645Gallus_gallus
ENSKMAG00000019429cpsf210095.807ENSGAFG00000001407cpsf210095.807Gambusia_affinis
ENSKMAG00000019429cpsf210094.663ENSGACG00000008418cpsf210094.663Gasterosteus_aculeatus
ENSKMAG00000019429cpsf210084.284ENSGAGG00000008287CPSF210084.284Gopherus_agassizii
ENSKMAG00000019429cpsf210084.664ENSGGOG00000011799CPSF210084.664Gorilla_gorilla
ENSKMAG00000019429cpsf210092.757ENSHBUG00000023466cpsf210092.757Haplochromis_burtoni
ENSKMAG00000019429cpsf210084.791ENSHGLG00000018311CPSF210084.791Heterocephalus_glaber_female
ENSKMAG00000019429cpsf210084.791ENSHGLG00100016460CPSF210084.791Heterocephalus_glaber_male
ENSKMAG00000019429cpsf210093.520ENSHCOG00000019527cpsf29893.520Hippocampus_comes
ENSKMAG00000019429cpsf210088.213ENSIPUG00000020857cpsf210088.213Ictalurus_punctatus
ENSKMAG00000019429cpsf210084.918ENSSTOG00000009528CPSF210084.918Ictidomys_tridecemlineatus
ENSKMAG00000019429cpsf210084.664ENSJJAG00000017925Cpsf210084.664Jaculus_jaculus
ENSKMAG00000019429cpsf29593.164ENSLBEG00000011585cpsf210093.164Labrus_bergylta
ENSKMAG00000019429cpsf210083.249ENSLACG00000019024CPSF210083.523Latimeria_chalumnae
ENSKMAG00000019429cpsf210088.608ENSLOCG00000014102cpsf210088.608Lepisosteus_oculatus
ENSKMAG00000019429cpsf210084.197ENSLAFG00000004891CPSF210084.197Loxodonta_africana
ENSKMAG00000019429cpsf210084.791ENSMFAG00000041212CPSF210084.791Macaca_fascicularis
ENSKMAG00000019429cpsf210084.791ENSMMUG00000000699CPSF210084.791Macaca_mulatta
ENSKMAG00000019429cpsf210084.791ENSMNEG00000031584CPSF210084.791Macaca_nemestrina
ENSKMAG00000019429cpsf210084.791ENSMLEG00000029394CPSF210084.791Mandrillus_leucophaeus
ENSKMAG00000019429cpsf210094.663ENSMAMG00000004235cpsf210094.663Mastacembelus_armatus
ENSKMAG00000019429cpsf210092.884ENSMZEG00005001769cpsf210092.884Maylandia_zebra
ENSKMAG00000019429cpsf210084.411ENSMGAG00000013122CPSF210084.411Meleagris_gallopavo
ENSKMAG00000019429cpsf210084.411ENSMAUG00000015160Cpsf210084.411Mesocricetus_auratus
ENSKMAG00000019429cpsf210084.791ENSMICG00000016441CPSF210084.791Microcebus_murinus
ENSKMAG00000019429cpsf210084.284ENSMOCG00000015372Cpsf210084.284Microtus_ochrogaster
ENSKMAG00000019429cpsf210088.564ENSMMOG00000015590cpsf210088.564Mola_mola
ENSKMAG00000019429cpsf210084.791ENSMODG00000002042CPSF210084.791Monodelphis_domestica
ENSKMAG00000019429cpsf210090.724ENSMALG00000022275cpsf210090.724Monopterus_albus
ENSKMAG00000019429cpsf210084.411ENSMUSG00000041781Cpsf210084.411Mus_musculus
ENSKMAG00000019429cpsf210084.537MGP_PahariEiJ_G0029791Cpsf210084.537Mus_pahari
ENSKMAG00000019429cpsf210084.411MGP_SPRETEiJ_G0018877Cpsf210084.411Mus_spretus
ENSKMAG00000019429cpsf210084.918ENSMPUG00000007617CPSF29884.918Mustela_putorius_furo
ENSKMAG00000019429cpsf210084.664ENSMLUG00000005570CPSF210084.664Myotis_lucifugus
ENSKMAG00000019429cpsf210084.664ENSNGAG00000020312Cpsf210084.664Nannospalax_galili
ENSKMAG00000019429cpsf210093.266ENSNBRG00000022402cpsf210093.266Neolamprologus_brichardi
ENSKMAG00000019429cpsf210083.904ENSNLEG00000017132CPSF210083.904Nomascus_leucogenys
ENSKMAG00000019429cpsf29193.528ENSMEUG00000008138CPSF29193.528Notamacropus_eugenii
ENSKMAG00000019429cpsf29479.810ENSOPRG00000008484-10079.946Ochotona_princeps
ENSKMAG00000019429cpsf210084.537ENSODEG00000008682CPSF210084.537Octodon_degus
ENSKMAG00000019429cpsf210093.011ENSONIG00000005901cpsf210093.011Oreochromis_niloticus
ENSKMAG00000019429cpsf210084.664ENSOANG00000003822CPSF210084.664Ornithorhynchus_anatinus
ENSKMAG00000019429cpsf210084.537ENSOCUG00000005713CPSF210084.537Oryctolagus_cuniculus
ENSKMAG00000019429cpsf210087.675ENSORLG00000011628cpsf210087.675Oryzias_latipes
ENSKMAG00000019429cpsf210093.393ENSORLG00020016980cpsf210093.393Oryzias_latipes_hni
ENSKMAG00000019429cpsf210093.393ENSORLG00015011910cpsf210093.393Oryzias_latipes_hsok
ENSKMAG00000019429cpsf210093.528ENSOMEG00000022876cpsf210093.528Oryzias_melastigma
ENSKMAG00000019429cpsf210081.795ENSOARG00000012889CPSF210081.795Ovis_aries
ENSKMAG00000019429cpsf210084.664ENSPPAG00000039666CPSF210084.664Pan_paniscus
ENSKMAG00000019429cpsf29984.645ENSPPRG00000010869CPSF210084.645Panthera_pardus
ENSKMAG00000019429cpsf210084.664ENSPTIG00000021202CPSF210084.664Panthera_tigris_altaica
ENSKMAG00000019429cpsf210084.664ENSPTRG00000006651CPSF210084.664Pan_troglodytes
ENSKMAG00000019429cpsf210084.791ENSPANG00000017417CPSF210084.791Papio_anubis
ENSKMAG00000019429cpsf210084.918ENSPKIG00000021453cpsf210084.918Paramormyrops_kingsleyae
ENSKMAG00000019429cpsf210083.904ENSPSIG00000006289CPSF210083.904Pelodiscus_sinensis
ENSKMAG00000019429cpsf27685.857ENSPMGG00000002511cpsf29987.000Periophthalmus_magnuspinnatus
ENSKMAG00000019429cpsf210084.537ENSPEMG00000007917Cpsf210084.537Peromyscus_maniculatus_bairdii
ENSKMAG00000019429cpsf210072.522ENSPMAG00000006205cpsf210072.784Petromyzon_marinus
ENSKMAG00000019429cpsf210084.791ENSPCIG00000011393CPSF210084.791Phascolarctos_cinereus
ENSKMAG00000019429cpsf210095.299ENSPFOG00000018648cpsf210095.299Poecilia_formosa
ENSKMAG00000019429cpsf210095.299ENSPLAG00000019199cpsf29995.299Poecilia_latipinna
ENSKMAG00000019429cpsf29695.119ENSPMEG00000012100cpsf210095.174Poecilia_mexicana
ENSKMAG00000019429cpsf210095.172ENSPREG00000008960cpsf210095.172Poecilia_reticulata
ENSKMAG00000019429cpsf26479.920ENSPPYG00000029685-10079.920Pongo_abelii
ENSKMAG00000019429cpsf210084.411ENSPCAG00000012477CPSF210084.411Procavia_capensis
ENSKMAG00000019429cpsf210084.918ENSPCOG00000026387CPSF210084.918Propithecus_coquereli
ENSKMAG00000019429cpsf26491.837ENSPVAG00000004223CPSF26591.837Pteropus_vampyrus
ENSKMAG00000019429cpsf210092.513ENSPNYG00000023356cpsf210092.513Pundamilia_nyererei
ENSKMAG00000019429cpsf210088.847ENSPNAG00000001849cpsf210088.847Pygocentrus_nattereri
ENSKMAG00000019429cpsf210084.411ENSRNOG00000005733Cpsf210084.411Rattus_norvegicus
ENSKMAG00000019429cpsf210084.791ENSRBIG00000044792CPSF210084.791Rhinopithecus_bieti
ENSKMAG00000019429cpsf210084.791ENSRROG00000034875CPSF210084.791Rhinopithecus_roxellana
ENSKMAG00000019429cpsf210084.918ENSSBOG00000024571CPSF210084.918Saimiri_boliviensis_boliviensis
ENSKMAG00000019429cpsf210085.044ENSSHAG00000010458CPSF210085.044Sarcophilus_harrisii
ENSKMAG00000019429cpsf210089.987ENSSFOG00015002117cpsf210090.114Scleropages_formosus
ENSKMAG00000019429cpsf210092.132ENSSMAG00000002001cpsf210093.020Scophthalmus_maximus
ENSKMAG00000019429cpsf210094.536ENSSDUG00000004084cpsf210094.536Seriola_dumerili
ENSKMAG00000019429cpsf210094.663ENSSLDG00000024330cpsf210094.663Seriola_lalandi_dorsalis
ENSKMAG00000019429cpsf25893.069ENSSARG00000009784-6393.069Sorex_araneus
ENSKMAG00000019429cpsf210084.157ENSSPUG00000013485CPSF210084.157Sphenodon_punctatus
ENSKMAG00000019429cpsf210094.663ENSSPAG00000013284cpsf210094.663Stegastes_partitus
ENSKMAG00000019429cpsf210084.537ENSSSCG00000002447CPSF210084.537Sus_scrofa
ENSKMAG00000019429cpsf210084.772ENSTGUG00000012571-10084.772Taeniopygia_guttata
ENSKMAG00000019429cpsf210092.630ENSTRUG00000003742cpsf210092.630Takifugu_rubripes
ENSKMAG00000019429cpsf210091.255ENSTNIG00000012228cpsf210092.269Tetraodon_nigroviridis
ENSKMAG00000019429cpsf29182.464ENSTBEG00000004530CPSF29482.464Tupaia_belangeri
ENSKMAG00000019429cpsf28889.583ENSTTRG00000008697CPSF28889.583Tursiops_truncatus
ENSKMAG00000019429cpsf210084.791ENSUAMG00000028071CPSF210084.791Ursus_americanus
ENSKMAG00000019429cpsf210084.791ENSUMAG00000005029CPSF210084.791Ursus_maritimus
ENSKMAG00000019429cpsf29984.645ENSVPAG00000003503CPSF210084.645Vicugna_pacos
ENSKMAG00000019429cpsf210084.664ENSVVUG00000024642CPSF210084.664Vulpes_vulpes
ENSKMAG00000019429cpsf210083.523ENSXETG00000010289cpsf210083.523Xenopus_tropicalis
ENSKMAG00000019429cpsf210094.663ENSXCOG00000001764cpsf210094.663Xiphophorus_couchianus
ENSKMAG00000019429cpsf210095.299ENSXMAG00000017048cpsf210095.299Xiphophorus_maculatus

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