EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019499 (Gene tree)
Gene ID: 108239231
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 15588 bases
Position: chrLWHD01000062.1:634305-649892
Accession: 108239231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026330	Ribonuc_2-5A	PF06479.12	5.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026667	-	4377	XM_017421817	ENSKMAP00000026330	1064 (aa)	XP_017277306	UPI0007F9385E

Gene Model

Click here to download ENSKMAG00000019499's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04140	Autophagy - animal	KEGG
kmr04141	Protein processing in endoplasmic reticulum	KEGG
kmr04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019499	ern1	87	56.080	ENSKMAG00000007537	ern2	96	55.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019499	ern1	98	86.610	ENSAPOG00000009999	ern1	99	85.767	Acanthochromis_polyacanthus
ENSKMAG00000019499	ern1	100	85.321	ENSACIG00000021716	ern1	100	85.321	Amphilophus_citrinellus
ENSKMAG00000019499	ern1	98	87.103	ENSAOCG00000012309	ern1	98	86.916	Amphiprion_ocellaris
ENSKMAG00000019499	ern1	98	86.636	ENSAPEG00000011263	ern1	99	90.792	Amphiprion_percula
ENSKMAG00000019499	ern1	99	84.736	ENSATEG00000024468	ern1	98	84.167	Anabas_testudineus
ENSKMAG00000019499	ern1	100	85.780	ENSACLG00000027919	ern1	100	85.780	Astatotilapia_calliptera
ENSKMAG00000019499	ern1	97	78.257	ENSAMXG00000000944	ern1	95	81.187	Astyanax_mexicanus
ENSKMAG00000019499	ern1	91	86.364	ENSCSEG00000014500	ern1	99	84.638	Cynoglossus_semilaevis
ENSKMAG00000019499	ern1	98	85.094	ENSCVAG00000002988	ern1	97	88.083	Cyprinodon_variegatus
ENSKMAG00000019499	ern1	90	80.021	ENSDARG00000013997	ern1	100	80.333	Danio_rerio
ENSKMAG00000019499	ern1	92	78.557	ENSELUG00000005957	ern1	97	78.557	Esox_lucius
ENSKMAG00000019499	ern1	98	85.104	ENSFHEG00000005578	ern1	97	86.484	Fundulus_heteroclitus
ENSKMAG00000019499	ern1	87	85.150	ENSGMOG00000011232	ern1	100	85.150	Gadus_morhua
ENSKMAG00000019499	ern1	98	85.917	ENSGAFG00000020231	ern1	99	85.822	Gambusia_affinis
ENSKMAG00000019499	ern1	88	87.841	ENSGACG00000011700	ern1	99	87.841	Gasterosteus_aculeatus
ENSKMAG00000019499	ern1	98	86.560	ENSHBUG00000012581	ern1	99	86.560	Haplochromis_burtoni
ENSKMAG00000019499	ern1	99	81.350	ENSHCOG00000016199	ern1	99	81.871	Hippocampus_comes
ENSKMAG00000019499	ern1	95	77.724	ENSIPUG00000011083	ern1	93	81.631	Ictalurus_punctatus
ENSKMAG00000019499	ern1	96	83.003	ENSLBEG00000025907	ern1	98	82.908	Labrus_bergylta
ENSKMAG00000019499	ern1	98	85.140	ENSMAMG00000023439	ern1	98	86.015	Mastacembelus_armatus
ENSKMAG00000019499	ern1	100	85.780	ENSMZEG00005003221	ern1	100	85.780	Maylandia_zebra
ENSKMAG00000019499	ern1	91	87.602	ENSMMOG00000007650	ern1	97	87.602	Mola_mola
ENSKMAG00000019499	ern1	99	83.073	ENSMALG00000017775	ern1	98	82.304	Monopterus_albus
ENSKMAG00000019499	ern1	98	86.466	ENSNBRG00000002179	ern1	99	86.466	Neolamprologus_brichardi
ENSKMAG00000019499	ern1	87	90.223	ENSONIG00000017169	ern1	97	90.512	Oreochromis_niloticus
ENSKMAG00000019499	ern1	98	83.597	ENSORLG00000008940	ern1	100	83.597	Oryzias_latipes
ENSKMAG00000019499	ern1	98	83.784	ENSORLG00020018387	ern1	100	83.784	Oryzias_latipes_hni
ENSKMAG00000019499	ern1	98	83.784	ENSORLG00015007946	ern1	100	83.784	Oryzias_latipes_hsok
ENSKMAG00000019499	ern1	98	84.186	ENSOMEG00000011741	ern1	100	84.186	Oryzias_melastigma
ENSKMAG00000019499	ern1	90	81.884	ENSPKIG00000005593	ern1	98	81.884	Paramormyrops_kingsleyae
ENSKMAG00000019499	ern1	98	82.049	ENSPMGG00000020442	ern1	97	85.600	Periophthalmus_magnuspinnatus
ENSKMAG00000019499	ern1	98	86.364	ENSPFOG00000007378	ern1	95	89.254	Poecilia_formosa
ENSKMAG00000019499	ern1	98	86.377	ENSPLAG00000014780	ern1	99	86.282	Poecilia_latipinna
ENSKMAG00000019499	ern1	98	86.471	ENSPMEG00000016324	ern1	99	86.391	Poecilia_mexicana
ENSKMAG00000019499	ern1	98	86.093	ENSPREG00000006286	ern1	99	85.998	Poecilia_reticulata
ENSKMAG00000019499	ern1	100	86.239	ENSPNYG00000017929	ern1	98	89.219	Pundamilia_nyererei
ENSKMAG00000019499	ern1	95	79.357	ENSPNAG00000029447	ern1	93	83.160	Pygocentrus_nattereri
ENSKMAG00000019499	ern1	100	82.831	ENSSMAG00000015042	ern1	100	82.740	Scophthalmus_maximus
ENSKMAG00000019499	ern1	100	86.197	ENSSDUG00000009098	ern1	99	86.197	Seriola_dumerili
ENSKMAG00000019499	ern1	99	86.002	ENSSLDG00000023254	ern1	99	86.002	Seriola_lalandi_dorsalis
ENSKMAG00000019499	ern1	98	86.410	ENSSPAG00000017539	ern1	99	85.940	Stegastes_partitus
ENSKMAG00000019499	ern1	93	84.669	ENSTRUG00000001041	ern1	93	86.943	Takifugu_rubripes
ENSKMAG00000019499	ern1	87	89.221	ENSTNIG00000017990	ern1	99	88.353	Tetraodon_nigroviridis
ENSKMAG00000019499	ern1	90	90.722	ENSXCOG00000010330	ern1	97	90.722	Xiphophorus_couchianus
ENSKMAG00000019499	ern1	98	85.809	ENSXMAG00000001310	ern1	94	89.357	Xiphophorus_maculatus