EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019518 (Gene tree)
Gene ID: 108244359
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 24778 bases
Position: chrLWHD01000139.1:657981-682758
Accession: 108244359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026428	ResIII	PF04851.15	1.5e-08	1	1
ENSKMAP00000026398	ResIII	PF04851.15	1.7e-08	1	1
ENSKMAP00000026428	BRK	PF07533.16	5.1e-16	1	1
ENSKMAP00000026398	BRK	PF07533.16	5.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026736	-	7573	XM_025009173	ENSKMAP00000026398	1667 (aa)	XP_024864941	UPI0007F937A9
ENSKMAT00000026767	-	4647	-	ENSKMAP00000026428	1548 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000019518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019518	-	98	72.482	ENSKMAG00000015844	-	92	72.368
ENSKMAG00000019518	-	98	87.336	ENSKMAG00000011931	smarca4a	95	88.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019518	-	98	87.346	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSKMAG00000019518	-	76	89.066	ENSAPOG00000003509	smarca4a	98	86.911	Acanthochromis_polyacanthus
ENSKMAG00000019518	-	95	95.426	ENSAPOG00000004542	SMARCA4	98	95.551	Acanthochromis_polyacanthus
ENSKMAG00000019518	-	98	83.302	ENSAMEG00000010868	SMARCA4	100	81.048	Ailuropoda_melanoleuca
ENSKMAG00000019518	-	98	86.808	ENSACIG00000021550	smarca4a	94	86.072	Amphilophus_citrinellus
ENSKMAG00000019518	-	98	91.089	ENSACIG00000003035	-	99	93.010	Amphilophus_citrinellus
ENSKMAG00000019518	-	96	96.144	ENSAOCG00000009450	-	97	96.144	Amphiprion_ocellaris
ENSKMAG00000019518	-	90	82.553	ENSAOCG00000019167	smarca4a	100	85.083	Amphiprion_ocellaris
ENSKMAG00000019518	-	100	95.241	ENSAPEG00000023108	-	100	95.360	Amphiprion_percula
ENSKMAG00000019518	-	90	82.620	ENSAPEG00000015559	smarca4a	100	85.152	Amphiprion_percula
ENSKMAG00000019518	-	98	86.200	ENSATEG00000011524	smarca4a	100	83.976	Anabas_testudineus
ENSKMAG00000019518	-	99	93.754	ENSATEG00000001094	-	98	94.057	Anabas_testudineus
ENSKMAG00000019518	-	98	87.168	ENSANAG00000036991	SMARCA4	100	81.070	Aotus_nancymaae
ENSKMAG00000019518	-	95	94.717	ENSACLG00000008638	-	98	95.157	Astatotilapia_calliptera
ENSKMAG00000019518	-	98	88.343	ENSACLG00000000163	smarca4a	94	88.758	Astatotilapia_calliptera
ENSKMAG00000019518	-	98	82.085	ENSAMXG00000021023	smarca4a	96	83.736	Astyanax_mexicanus
ENSKMAG00000019518	-	96	89.143	ENSAMXG00000011238	-	99	88.025	Astyanax_mexicanus
ENSKMAG00000019518	-	98	87.581	ENSBTAG00000019220	SMARCA4	97	83.303	Bos_taurus
ENSKMAG00000019518	-	95	90.231	ENSCJAG00000005936	SMARCA4	95	87.285	Callithrix_jacchus
ENSKMAG00000019518	-	98	87.541	ENSCAFG00000017584	SMARCA4	100	83.998	Canis_familiaris
ENSKMAG00000019518	-	98	87.541	ENSCAFG00020024620	SMARCA4	99	83.998	Canis_lupus_dingo
ENSKMAG00000019518	-	98	83.636	ENSCHIG00000015318	SMARCA4	100	79.917	Capra_hircus
ENSKMAG00000019518	-	98	87.703	ENSTSYG00000012966	SMARCA4	100	83.641	Carlito_syrichta
ENSKMAG00000019518	-	96	81.993	ENSCAPG00000015932	SMARCA4	95	90.295	Cavia_aperea
ENSKMAG00000019518	-	98	87.654	ENSCPOG00000015549	SMARCA4	100	83.998	Cavia_porcellus
ENSKMAG00000019518	-	98	85.065	ENSCCAG00000031660	SMARCA4	99	81.113	Cebus_capucinus
ENSKMAG00000019518	-	98	87.346	ENSCATG00000029530	SMARCA4	100	83.879	Cercocebus_atys
ENSKMAG00000019518	-	98	87.760	ENSCLAG00000011946	SMARCA4	100	83.760	Chinchilla_lanigera
ENSKMAG00000019518	-	98	87.516	ENSCPBG00000009994	SMARCA4	100	83.373	Chrysemys_picta_bellii
ENSKMAG00000019518	-	98	87.346	ENSCANG00000036013	SMARCA4	100	83.879	Colobus_angolensis_palliatus
ENSKMAG00000019518	-	98	87.281	ENSCGRG00001016732	Smarca4	100	83.760	Cricetulus_griseus_chok1gshd
ENSKMAG00000019518	-	98	87.281	ENSCGRG00000017242	Smarca4	100	83.760	Cricetulus_griseus_crigri
ENSKMAG00000019518	-	96	83.530	ENSCSEG00000014771	smarca4a	97	84.116	Cynoglossus_semilaevis
ENSKMAG00000019518	-	98	85.539	ENSCVAG00000006979	smarca4a	95	85.889	Cyprinodon_variegatus
ENSKMAG00000019518	-	96	97.141	ENSCVAG00000003018	-	96	97.141	Cyprinodon_variegatus
ENSKMAG00000019518	-	94	86.067	ENSDARG00000104339	SMARCA4	94	85.676	Danio_rerio
ENSKMAG00000019518	-	98	86.611	ENSDARG00000077226	smarca4a	100	84.735	Danio_rerio
ENSKMAG00000019518	-	96	83.582	ENSDNOG00000048847	SMARCA4	90	90.791	Dasypus_novemcinctus
ENSKMAG00000019518	-	88	81.779	ENSDORG00000002544	Smarca4	91	82.405	Dipodomys_ordii
ENSKMAG00000019518	-	96	75.564	ENSETEG00000013361	SMARCA4	94	74.807	Echinops_telfairi
ENSKMAG00000019518	-	98	87.346	ENSEASG00005006167	SMARCA4	100	81.993	Equus_asinus_asinus
ENSKMAG00000019518	-	98	87.411	ENSECAG00000008334	SMARCA4	100	83.819	Equus_caballus
ENSKMAG00000019518	-	98	85.150	ENSELUG00000010247	smarca4a	100	82.255	Esox_lucius
ENSKMAG00000019518	-	98	82.993	ENSELUG00000023232	-	98	84.037	Esox_lucius
ENSKMAG00000019518	-	98	87.435	ENSFCAG00000004894	SMARCA4	100	82.927	Felis_catus
ENSKMAG00000019518	-	84	90.349	ENSFALG00000004208	SMARCA4	95	83.911	Ficedula_albicollis
ENSKMAG00000019518	-	94	87.205	ENSFDAG00000012237	SMARCA4	97	86.913	Fukomys_damarensis
ENSKMAG00000019518	-	100	96.826	ENSFHEG00000007902	-	100	96.826	Fundulus_heteroclitus
ENSKMAG00000019518	-	94	85.163	ENSFHEG00000010182	smarca4a	100	82.158	Fundulus_heteroclitus
ENSKMAG00000019518	-	91	82.927	ENSGMOG00000002649	smarca4a	85	83.465	Gadus_morhua
ENSKMAG00000019518	-	93	84.979	ENSGMOG00000005756	-	86	84.622	Gadus_morhua
ENSKMAG00000019518	-	75	86.729	ENSGALG00000047145	SMARCA4	100	86.210	Gallus_gallus
ENSKMAG00000019518	-	88	88.840	ENSGAFG00000014900	smarca4a	97	87.852	Gambusia_affinis
ENSKMAG00000019518	-	98	89.967	ENSGAFG00000008827	-	98	86.938	Gambusia_affinis
ENSKMAG00000019518	-	94	85.915	ENSGACG00000006691	smarca4a	92	85.073	Gasterosteus_aculeatus
ENSKMAG00000019518	-	98	87.218	ENSGACG00000016033	-	100	85.181	Gasterosteus_aculeatus
ENSKMAG00000019518	-	98	87.622	ENSGAGG00000016757	SMARCA4	100	83.462	Gopherus_agassizii
ENSKMAG00000019518	-	98	87.346	ENSGGOG00000009882	SMARCA4	100	83.879	Gorilla_gorilla
ENSKMAG00000019518	-	98	88.409	ENSHBUG00000021172	smarca4a	100	85.125	Haplochromis_burtoni
ENSKMAG00000019518	-	100	94.192	ENSHBUG00000005447	-	100	94.731	Haplochromis_burtoni
ENSKMAG00000019518	-	98	87.241	ENSHGLG00000010519	SMARCA4	100	82.986	Heterocephalus_glaber_female
ENSKMAG00000019518	-	98	87.013	ENSHGLG00100013774	SMARCA4	100	83.145	Heterocephalus_glaber_male
ENSKMAG00000019518	-	100	85.571	ENSHCOG00000009510	smarca4a	99	83.988	Hippocampus_comes
ENSKMAG00000019518	-	95	87.989	ENSIPUG00000016346	-	97	84.914	Ictalurus_punctatus
ENSKMAG00000019518	-	99	85.048	ENSIPUG00000006107	smarca4a	100	85.313	Ictalurus_punctatus
ENSKMAG00000019518	-	98	87.476	ENSSTOG00000007939	SMARCA4	100	83.879	Ictidomys_tridecemlineatus
ENSKMAG00000019518	-	98	85.451	ENSJJAG00000012877	Smarca4	100	82.708	Jaculus_jaculus
ENSKMAG00000019518	-	93	91.986	ENSLBEG00000020655	-	94	80.345	Labrus_bergylta
ENSKMAG00000019518	-	99	84.311	ENSLBEG00000017383	smarca4a	97	84.013	Labrus_bergylta
ENSKMAG00000019518	-	53	81.078	ENSLACG00000015309	SMARCA4	100	79.786	Latimeria_chalumnae
ENSKMAG00000019518	-	98	84.760	ENSLOCG00000007820	smarca4a	99	80.142	Lepisosteus_oculatus
ENSKMAG00000019518	-	98	87.370	ENSLAFG00000001433	SMARCA4	100	82.867	Loxodonta_africana
ENSKMAG00000019518	-	98	87.346	ENSMFAG00000032146	SMARCA4	99	83.879	Macaca_fascicularis
ENSKMAG00000019518	-	98	87.346	ENSMMUG00000012042	SMARCA4	99	88.343	Macaca_mulatta
ENSKMAG00000019518	-	98	87.386	ENSMNEG00000028512	SMARCA4	100	83.601	Macaca_nemestrina
ENSKMAG00000019518	-	98	87.021	ENSMLEG00000034976	SMARCA4	99	83.819	Mandrillus_leucophaeus
ENSKMAG00000019518	-	98	88.053	ENSMAMG00000009256	smarca4a	94	88.193	Mastacembelus_armatus
ENSKMAG00000019518	-	99	95.850	ENSMAMG00000002841	-	99	95.850	Mastacembelus_armatus
ENSKMAG00000019518	-	96	94.407	ENSMZEG00005023861	-	98	94.896	Maylandia_zebra
ENSKMAG00000019518	-	98	88.409	ENSMZEG00005003889	smarca4a	100	85.015	Maylandia_zebra
ENSKMAG00000019518	-	98	87.176	ENSMAUG00000020731	Smarca4	100	82.591	Mesocricetus_auratus
ENSKMAG00000019518	-	98	87.435	ENSMICG00000009806	SMARCA4	100	82.927	Microcebus_murinus
ENSKMAG00000019518	-	98	86.852	ENSMOCG00000022209	Smarca4	100	82.570	Microtus_ochrogaster
ENSKMAG00000019518	-	98	89.335	ENSMMOG00000008466	-	94	89.072	Mola_mola
ENSKMAG00000019518	-	98	84.813	ENSMMOG00000007571	smarca4a	98	83.229	Mola_mola
ENSKMAG00000019518	-	98	85.814	ENSMODG00000006287	SMARCA4	100	82.971	Monodelphis_domestica
ENSKMAG00000019518	-	92	90.397	ENSMALG00000021534	-	98	91.379	Monopterus_albus
ENSKMAG00000019518	-	94	87.720	ENSMALG00000003388	smarca4a	100	84.478	Monopterus_albus
ENSKMAG00000019518	-	98	87.151	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.456	Mus_caroli
ENSKMAG00000019518	-	98	87.151	ENSMUSG00000032187	Smarca4	99	85.456	Mus_musculus
ENSKMAG00000019518	-	98	86.866	MGP_PahariEiJ_G0014745	Smarca4	100	85.063	Mus_pahari
ENSKMAG00000019518	-	98	87.151	MGP_SPRETEiJ_G0033003	Smarca4	100	85.456	Mus_spretus
ENSKMAG00000019518	-	98	87.476	ENSMPUG00000005711	SMARCA4	100	83.938	Mustela_putorius_furo
ENSKMAG00000019518	-	98	87.541	ENSMLUG00000004491	-	100	84.057	Myotis_lucifugus
ENSKMAG00000019518	-	98	87.378	ENSNGAG00000021852	Smarca4	100	83.581	Nannospalax_galili
ENSKMAG00000019518	-	98	85.919	ENSNBRG00000011457	smarca4a	96	85.947	Neolamprologus_brichardi
ENSKMAG00000019518	-	92	89.221	ENSNBRG00000018865	-	99	91.238	Neolamprologus_brichardi
ENSKMAG00000019518	-	98	83.549	ENSNLEG00000012389	SMARCA4	94	83.517	Nomascus_leucogenys
ENSKMAG00000019518	-	78	96.552	ENSOPRG00000000885	-	78	96.552	Ochotona_princeps
ENSKMAG00000019518	-	98	85.484	ENSODEG00000017127	SMARCA4	100	82.266	Octodon_degus
ENSKMAG00000019518	-	98	88.316	ENSONIG00000008196	smarca4a	100	85.185	Oreochromis_niloticus
ENSKMAG00000019518	-	99	94.428	ENSONIG00000018040	-	100	94.967	Oreochromis_niloticus
ENSKMAG00000019518	-	98	82.048	ENSOCUG00000001787	SMARCA4	95	81.522	Oryctolagus_cuniculus
ENSKMAG00000019518	-	94	86.595	ENSORLG00000015452	smarca4a	95	86.662	Oryzias_latipes
ENSKMAG00000019518	-	97	93.449	ENSORLG00000003955	-	97	93.519	Oryzias_latipes
ENSKMAG00000019518	-	96	95.740	ENSORLG00020009728	-	97	93.584	Oryzias_latipes_hni
ENSKMAG00000019518	-	94	86.327	ENSORLG00020004611	smarca4a	99	84.170	Oryzias_latipes_hni
ENSKMAG00000019518	-	100	92.712	ENSORLG00015007739	-	97	93.395	Oryzias_latipes_hsok
ENSKMAG00000019518	-	94	86.327	ENSORLG00015016560	smarca4a	98	86.319	Oryzias_latipes_hsok
ENSKMAG00000019518	-	97	93.939	ENSOMEG00000016626	-	97	94.070	Oryzias_melastigma
ENSKMAG00000019518	-	98	86.546	ENSOMEG00000007486	smarca4a	95	86.959	Oryzias_melastigma
ENSKMAG00000019518	-	92	85.724	ENSOGAG00000016148	SMARCA4	100	85.606	Otolemur_garnettii
ENSKMAG00000019518	-	98	87.199	ENSOARG00000017454	SMARCA4	97	82.873	Ovis_aries
ENSKMAG00000019518	-	98	87.346	ENSPPAG00000043191	SMARCA4	100	83.879	Pan_paniscus
ENSKMAG00000019518	-	98	87.435	ENSPPRG00000000064	SMARCA4	100	82.927	Panthera_pardus
ENSKMAG00000019518	-	99	76.268	ENSPTIG00000017447	SMARCA4	100	78.966	Panthera_tigris_altaica
ENSKMAG00000019518	-	98	87.346	ENSPTRG00000010488	SMARCA4	100	83.879	Pan_troglodytes
ENSKMAG00000019518	-	98	87.386	ENSPANG00000011042	SMARCA4	99	83.760	Papio_anubis
ENSKMAG00000019518	-	94	88.133	ENSPKIG00000007770	SMARCA4	99	86.005	Paramormyrops_kingsleyae
ENSKMAG00000019518	-	94	88.430	ENSPKIG00000010087	-	98	84.834	Paramormyrops_kingsleyae
ENSKMAG00000019518	-	98	80.432	ENSPSIG00000005547	SMARCA4	100	78.393	Pelodiscus_sinensis
ENSKMAG00000019518	-	98	87.047	ENSPEMG00000020389	Smarca4	100	82.629	Peromyscus_maniculatus_bairdii
ENSKMAG00000019518	-	98	87.532	ENSPCIG00000017138	SMARCA4	100	84.098	Phascolarctos_cinereus
ENSKMAG00000019518	-	98	85.183	ENSPFOG00000007892	smarca4a	95	85.623	Poecilia_formosa
ENSKMAG00000019518	-	100	96.463	ENSPFOG00000012930	-	100	96.463	Poecilia_formosa
ENSKMAG00000019518	-	99	95.892	ENSPLAG00000018616	-	96	95.892	Poecilia_latipinna
ENSKMAG00000019518	-	98	85.375	ENSPLAG00000014294	smarca4a	96	87.454	Poecilia_latipinna
ENSKMAG00000019518	-	99	94.553	ENSPMEG00000008929	-	98	96.089	Poecilia_mexicana
ENSKMAG00000019518	-	98	85.247	ENSPMEG00000003725	smarca4a	96	85.687	Poecilia_mexicana
ENSKMAG00000019518	-	98	84.944	ENSPREG00000014608	smarca4a	96	84.584	Poecilia_reticulata
ENSKMAG00000019518	-	97	96.646	ENSPREG00000014823	-	98	96.646	Poecilia_reticulata
ENSKMAG00000019518	-	98	85.560	ENSPPYG00000009568	SMARCA4	100	82.649	Pongo_abelii
ENSKMAG00000019518	-	77	89.011	ENSPCAG00000014054	SMARCA4	73	88.764	Procavia_capensis
ENSKMAG00000019518	-	98	87.476	ENSPCOG00000023011	SMARCA4	99	83.938	Propithecus_coquereli
ENSKMAG00000019518	-	93	81.121	ENSPVAG00000007787	SMARCA4	96	74.915	Pteropus_vampyrus
ENSKMAG00000019518	-	98	90.693	ENSPNYG00000023995	-	99	92.746	Pundamilia_nyererei
ENSKMAG00000019518	-	98	87.010	ENSPNYG00000000717	smarca4a	96	86.355	Pundamilia_nyererei
ENSKMAG00000019518	-	98	88.968	ENSPNAG00000006636	-	97	88.645	Pygocentrus_nattereri
ENSKMAG00000019518	-	98	87.216	ENSRNOG00000009271	Smarca4	100	83.641	Rattus_norvegicus
ENSKMAG00000019518	-	98	87.281	ENSRBIG00000038696	SMARCA4	99	83.760	Rhinopithecus_bieti
ENSKMAG00000019518	-	98	87.346	ENSRROG00000045509	SMARCA4	100	83.819	Rhinopithecus_roxellana
ENSKMAG00000019518	-	98	87.346	ENSSBOG00000026896	SMARCA4	99	84.036	Saimiri_boliviensis_boliviensis
ENSKMAG00000019518	-	98	87.273	ENSSHAG00000001642	SMARCA4	100	83.979	Sarcophilus_harrisii
ENSKMAG00000019518	-	98	87.412	ENSSFOG00015013823	smarca4	99	85.364	Scleropages_formosus
ENSKMAG00000019518	-	100	91.393	ENSSMAG00000014082	-	100	91.622	Scophthalmus_maximus
ENSKMAG00000019518	-	98	87.475	ENSSMAG00000003200	smarca4a	97	84.131	Scophthalmus_maximus
ENSKMAG00000019518	-	98	84.255	ENSSDUG00000017298	smarca4a	95	84.255	Seriola_dumerili
ENSKMAG00000019518	-	99	94.656	ENSSDUG00000005388	-	100	95.623	Seriola_dumerili
ENSKMAG00000019518	-	99	95.935	ENSSLDG00000023663	-	99	95.935	Seriola_lalandi_dorsalis
ENSKMAG00000019518	-	98	86.078	ENSSLDG00000024486	smarca4a	100	85.685	Seriola_lalandi_dorsalis
ENSKMAG00000019518	-	61	98.137	ENSSARG00000013477	SMARCA4	81	98.137	Sorex_araneus
ENSKMAG00000019518	-	98	83.819	ENSSPUG00000004558	SMARCA4	98	83.484	Sphenodon_punctatus
ENSKMAG00000019518	-	100	95.544	ENSSPAG00000012533	-	100	95.544	Stegastes_partitus
ENSKMAG00000019518	-	98	85.696	ENSSPAG00000004248	smarca4a	100	84.693	Stegastes_partitus
ENSKMAG00000019518	-	98	87.500	ENSSSCG00000013629	SMARCA4	100	82.986	Sus_scrofa
ENSKMAG00000019518	-	54	85.242	ENSTGUG00000015488	-	99	85.159	Taeniopygia_guttata
ENSKMAG00000019518	-	92	80.874	ENSTRUG00000004885	smarca4a	96	80.636	Takifugu_rubripes
ENSKMAG00000019518	-	99	89.731	ENSTRUG00000001378	SMARCA4	99	91.620	Takifugu_rubripes
ENSKMAG00000019518	-	98	91.725	ENSTNIG00000004536	SMARCA4	100	89.175	Tetraodon_nigroviridis
ENSKMAG00000019518	-	75	84.752	ENSTNIG00000004859	-	100	84.752	Tetraodon_nigroviridis
ENSKMAG00000019518	-	98	84.576	ENSTTRG00000009519	SMARCA4	100	81.301	Tursiops_truncatus
ENSKMAG00000019518	-	98	87.541	ENSUAMG00000014661	SMARCA4	100	83.998	Ursus_americanus
ENSKMAG00000019518	-	94	89.214	ENSUMAG00000022005	SMARCA4	98	90.106	Ursus_maritimus
ENSKMAG00000019518	-	98	87.541	ENSVVUG00000017820	SMARCA4	97	83.998	Vulpes_vulpes
ENSKMAG00000019518	-	98	83.620	ENSXETG00000009355	smarca4	99	82.732	Xenopus_tropicalis
ENSKMAG00000019518	-	99	90.915	ENSXCOG00000013494	-	97	92.151	Xiphophorus_couchianus
ENSKMAG00000019518	-	98	85.071	ENSXMAG00000006321	smarca4a	100	84.269	Xiphophorus_maculatus
ENSKMAG00000019518	-	100	96.161	ENSXMAG00000007030	-	100	96.161	Xiphophorus_maculatus