EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019657 (Gene tree)
Gene ID: 108247790
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7963 bases
Position: chrLWHD01000296.1:348493-356455
Accession: 108247790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026484	zf-C2H2	PF00096.26	5.6e-19	1	2
ENSKMAP00000026484	zf-C2H2	PF00096.26	5.6e-19	2	2
ENSKMAP00000026484	zf-met	PF12874.7	9.3e-11	1	2
ENSKMAP00000026484	zf-met	PF12874.7	9.3e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000026823	-	6186	XM_017436153	ENSKMAP00000026484	1218 (aa)	XP_017291642	UPI0007F8A91B

Gene Model

Click here to download ENSKMAG00000019657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019657	si:ch211-212k18.5	55	47.233	ENSKMAG00000020172	sall2	53	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019657	si:ch211-212k18.5	99	75.182	ENSAPOG00000013387	si:ch211-212k18.5	99	74.128	Acanthochromis_polyacanthus
ENSKMAG00000019657	si:ch211-212k18.5	68	48.067	ENSAPOG00000015347	sall2	54	47.348	Acanthochromis_polyacanthus
ENSKMAG00000019657	si:ch211-212k18.5	80	78.942	ENSACIG00000019922	si:ch211-212k18.5	99	80.366	Amphilophus_citrinellus
ENSKMAG00000019657	si:ch211-212k18.5	99	72.308	ENSAOCG00000010737	si:ch211-212k18.5	99	71.903	Amphiprion_ocellaris
ENSKMAG00000019657	si:ch211-212k18.5	54	48.659	ENSAPEG00000020215	sall2	84	46.839	Amphiprion_percula
ENSKMAG00000019657	si:ch211-212k18.5	99	72.551	ENSAPEG00000006751	si:ch211-212k18.5	99	72.146	Amphiprion_percula
ENSKMAG00000019657	si:ch211-212k18.5	77	79.977	ENSATEG00000001254	si:ch211-212k18.5	99	79.634	Anabas_testudineus
ENSKMAG00000019657	si:ch211-212k18.5	99	72.624	ENSACLG00000009709	si:ch211-212k18.5	99	73.431	Astatotilapia_calliptera
ENSKMAG00000019657	si:ch211-212k18.5	61	45.539	ENSACLG00000019867	sall2	65	44.965	Astatotilapia_calliptera
ENSKMAG00000019657	si:ch211-212k18.5	54	49.501	ENSAMXG00000020956	sall2	58	48.936	Astyanax_mexicanus
ENSKMAG00000019657	si:ch211-212k18.5	98	55.746	ENSAMXG00000010979	si:ch211-212k18.5	99	54.105	Astyanax_mexicanus
ENSKMAG00000019657	si:ch211-212k18.5	99	70.113	ENSCSEG00000004426	si:ch211-212k18.5	99	68.795	Cynoglossus_semilaevis
ENSKMAG00000019657	si:ch211-212k18.5	99	75.000	ENSCVAG00000007475	si:ch211-212k18.5	99	75.082	Cyprinodon_variegatus
ENSKMAG00000019657	si:ch211-212k18.5	95	55.745	ENSDARG00000103316	si:ch211-212k18.5	95	53.898	Danio_rerio
ENSKMAG00000019657	si:ch211-212k18.5	99	56.354	ENSELUG00000024534	si:ch211-212k18.5	100	54.739	Esox_lucius
ENSKMAG00000019657	si:ch211-212k18.5	99	74.755	ENSFHEG00000017264	si:ch211-212k18.5	99	74.101	Fundulus_heteroclitus
ENSKMAG00000019657	si:ch211-212k18.5	100	74.430	ENSGAFG00000003746	si:ch211-212k18.5	100	74.430	Gambusia_affinis
ENSKMAG00000019657	si:ch211-212k18.5	65	47.724	ENSGAFG00000015194	sall2	63	56.818	Gambusia_affinis
ENSKMAG00000019657	si:ch211-212k18.5	99	72.543	ENSHBUG00000019672	si:ch211-212k18.5	99	74.545	Haplochromis_burtoni
ENSKMAG00000019657	si:ch211-212k18.5	75	43.691	ENSHBUG00000002882	sall2	59	45.082	Haplochromis_burtoni
ENSKMAG00000019657	si:ch211-212k18.5	98	61.032	ENSHCOG00000002842	si:ch211-212k18.5	99	60.033	Hippocampus_comes
ENSKMAG00000019657	si:ch211-212k18.5	97	53.081	ENSIPUG00000002559	sall2	95	53.339	Ictalurus_punctatus
ENSKMAG00000019657	si:ch211-212k18.5	100	70.040	ENSLBEG00000020887	si:ch211-212k18.5	99	69.424	Labrus_bergylta
ENSKMAG00000019657	si:ch211-212k18.5	70	82.497	ENSMAMG00000015887	si:ch211-212k18.5	99	82.009	Mastacembelus_armatus
ENSKMAG00000019657	si:ch211-212k18.5	75	43.691	ENSMZEG00005012103	sall2	59	45.082	Maylandia_zebra
ENSKMAG00000019657	si:ch211-212k18.5	99	72.624	ENSMZEG00005021214	si:ch211-212k18.5	99	73.431	Maylandia_zebra
ENSKMAG00000019657	si:ch211-212k18.5	90	78.989	ENSMMOG00000012726	si:ch211-212k18.5	99	77.865	Mola_mola
ENSKMAG00000019657	si:ch211-212k18.5	92	73.224	ENSMALG00000000979	si:ch211-212k18.5	97	72.444	Monopterus_albus
ENSKMAG00000019657	si:ch211-212k18.5	69	45.314	ENSNBRG00000017645	sall2	60	48.584	Neolamprologus_brichardi
ENSKMAG00000019657	si:ch211-212k18.5	94	70.060	ENSNBRG00000023948	si:ch211-212k18.5	96	69.991	Neolamprologus_brichardi
ENSKMAG00000019657	si:ch211-212k18.5	99	70.779	ENSORLG00000030429	si:ch211-212k18.5	99	70.106	Oryzias_latipes
ENSKMAG00000019657	si:ch211-212k18.5	99	70.382	ENSORLG00020008145	si:ch211-212k18.5	99	70.138	Oryzias_latipes_hni
ENSKMAG00000019657	si:ch211-212k18.5	99	70.057	ENSORLG00015004982	si:ch211-212k18.5	99	69.650	Oryzias_latipes_hsok
ENSKMAG00000019657	si:ch211-212k18.5	99	69.622	ENSOMEG00000013949	si:ch211-212k18.5	99	69.869	Oryzias_melastigma
ENSKMAG00000019657	si:ch211-212k18.5	56	45.641	ENSOMEG00000012904	sall2	62	43.866	Oryzias_melastigma
ENSKMAG00000019657	si:ch211-212k18.5	71	50.743	ENSPKIG00000009207	sall2	67	49.309	Paramormyrops_kingsleyae
ENSKMAG00000019657	si:ch211-212k18.5	94	65.165	ENSPMGG00000018714	si:ch211-212k18.5	99	63.810	Periophthalmus_magnuspinnatus
ENSKMAG00000019657	si:ch211-212k18.5	99	75.185	ENSPFOG00000023705	si:ch211-212k18.5	99	76.277	Poecilia_formosa
ENSKMAG00000019657	si:ch211-212k18.5	99	75.268	ENSPLAG00000002577	si:ch211-212k18.5	100	74.572	Poecilia_latipinna
ENSKMAG00000019657	si:ch211-212k18.5	99	75.103	ENSPMEG00000016395	si:ch211-212k18.5	99	75.671	Poecilia_mexicana
ENSKMAG00000019657	si:ch211-212k18.5	65	46.641	ENSPREG00000021908	sall2	63	56.818	Poecilia_reticulata
ENSKMAG00000019657	si:ch211-212k18.5	100	74.328	ENSPREG00000005292	si:ch211-212k18.5	100	74.328	Poecilia_reticulata
ENSKMAG00000019657	si:ch211-212k18.5	99	69.212	ENSPNYG00000021576	si:ch211-212k18.5	99	70.008	Pundamilia_nyererei
ENSKMAG00000019657	si:ch211-212k18.5	95	56.292	ENSPNAG00000006123	si:ch211-212k18.5	94	55.462	Pygocentrus_nattereri
ENSKMAG00000019657	si:ch211-212k18.5	80	46.564	ENSSMAG00000014157	sall2	67	44.388	Scophthalmus_maximus
ENSKMAG00000019657	si:ch211-212k18.5	100	70.113	ENSSMAG00000006241	si:ch211-212k18.5	99	70.065	Scophthalmus_maximus
ENSKMAG00000019657	si:ch211-212k18.5	100	73.994	ENSSDUG00000006164	si:ch211-212k18.5	99	73.226	Seriola_dumerili
ENSKMAG00000019657	si:ch211-212k18.5	100	75.765	ENSSLDG00000003393	si:ch211-212k18.5	99	74.919	Seriola_lalandi_dorsalis
ENSKMAG00000019657	si:ch211-212k18.5	94	74.055	ENSSPAG00000013435	si:ch211-212k18.5	97	73.196	Stegastes_partitus
ENSKMAG00000019657	si:ch211-212k18.5	67	47.279	ENSSPAG00000023009	sall2	57	46.078	Stegastes_partitus
ENSKMAG00000019657	si:ch211-212k18.5	91	71.353	ENSTRUG00000025082	si:ch211-212k18.5	95	69.468	Takifugu_rubripes
ENSKMAG00000019657	si:ch211-212k18.5	98	73.924	ENSXCOG00000000762	si:ch211-212k18.5	100	73.697	Xiphophorus_couchianus
ENSKMAG00000019657	si:ch211-212k18.5	65	46.263	ENSXMAG00000000902	sall2	63	56.818	Xiphophorus_maculatus
ENSKMAG00000019657	si:ch211-212k18.5	98	75.745	ENSXMAG00000001461	si:ch211-212k18.5	100	75.000	Xiphophorus_maculatus