EuRBPDB

Description

Ensembl ID: ENSKMAG00000019855 (Gene tree)
Gene ID: 108236271
Gene Symbol: si:dkey-93h22.8
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8147 bases
Position: chrLWHD01000039.1:493069-501215
Accession: 108236271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026768	RRM_1	PF00076.22	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027107	-	3822	XM_025006076	ENSKMAP00000026768	1144 (aa)	XP_024861844	UPI0007F87518

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019855	si:dkey-93h22.8	70	75.969	ENSELUG00000018785	-	55	75.000	Esox_lucius
ENSKMAG00000019855	si:dkey-93h22.8	76	73.885	ENSORLG00000012355	si:dkey-93h22.8	79	79.104	Oryzias_latipes
ENSKMAG00000019855	si:dkey-93h22.8	73	74.522	ENSORLG00020004449	si:dkey-93h22.8	78	79.851	Oryzias_latipes_hni
ENSKMAG00000019855	si:dkey-93h22.8	77	38.471	ENSORLG00015002960	si:dkey-93h22.8	64	43.373	Oryzias_latipes_hsok
ENSKMAG00000019855	si:dkey-93h22.8	88	65.625	ENSOMEG00000012140	si:dkey-93h22.8	78	81.343	Oryzias_melastigma
ENSKMAG00000019855	si:dkey-93h22.8	83	72.832	ENSPFOG00000001320	si:dkey-93h22.8	59	87.407	Poecilia_formosa