EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019874 (Gene tree)
Gene ID: 108248431
Gene Symbol: zgc:112083
Alias: im:7144560|wu:fb73f06
Full Name: histone H4 transcription factor-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 11511 bases
Position: chrLWHD01000344.1:112451-123961
Accession: 108248431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026805	zf-C2H2	PF00096.26	8.1e-17	1	4
ENSKMAP00000026805	zf-C2H2	PF00096.26	8.1e-17	2	4
ENSKMAP00000026805	zf-C2H2	PF00096.26	8.1e-17	3	4
ENSKMAP00000026805	zf-C2H2	PF00096.26	8.1e-17	4	4
ENSKMAP00000026805	zf-met	PF12874.7	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027144	-	6351	XM_017437204	ENSKMAP00000026805	508 (aa)	XP_017292693	UPI0007F8A0F7

Gene Model

Click here to download ENSKMAG00000019874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019874	zgc:112083	56	32.857	ENSKMAG00000019130	-	76	32.857
ENSKMAG00000019874	zgc:112083	69	34.555	ENSKMAG00000011111	-	98	34.555
ENSKMAG00000019874	zgc:112083	54	31.319	ENSKMAG00000009015	-	79	31.319
ENSKMAG00000019874	zgc:112083	52	31.844	ENSKMAG00000021184	-	82	31.844
ENSKMAG00000019874	zgc:112083	63	31.868	ENSKMAG00000011031	-	64	30.366
ENSKMAG00000019874	zgc:112083	53	33.161	ENSKMAG00000021716	-	61	34.615
ENSKMAG00000019874	zgc:112083	66	30.151	ENSKMAG00000000597	-	95	31.884
ENSKMAG00000019874	zgc:112083	68	35.185	ENSKMAG00000006231	-	94	33.939
ENSKMAG00000019874	zgc:112083	50	30.653	ENSKMAG00000013843	-	62	31.746
ENSKMAG00000019874	zgc:112083	68	33.884	ENSKMAG00000006633	-	67	35.897
ENSKMAG00000019874	zgc:112083	73	30.978	ENSKMAG00000008316	-	82	30.978
ENSKMAG00000019874	zgc:112083	86	42.369	ENSKMAG00000008905	hinfp	80	44.388
ENSKMAG00000019874	zgc:112083	66	32.031	ENSKMAG00000003940	-	95	32.031
ENSKMAG00000019874	zgc:112083	52	30.939	ENSKMAG00000000689	-	82	32.824
ENSKMAG00000019874	zgc:112083	54	32.338	ENSKMAG00000000795	-	99	30.147
ENSKMAG00000019874	zgc:112083	63	31.690	ENSKMAG00000003186	-	80	31.690
ENSKMAG00000019874	zgc:112083	66	31.193	ENSKMAG00000003766	-	86	31.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019874	zgc:112083	82	42.518	ENSAPOG00000016594	hinfp	80	44.304	Acanthochromis_polyacanthus
ENSKMAG00000019874	zgc:112083	82	42.993	ENSAOCG00000014008	hinfp	79	45.361	Amphiprion_ocellaris
ENSKMAG00000019874	zgc:112083	82	42.891	ENSAPEG00000002011	hinfp	85	43.165	Amphiprion_percula
ENSKMAG00000019874	zgc:112083	83	42.453	ENSACLG00000014969	hinfp	79	45.103	Astatotilapia_calliptera
ENSKMAG00000019874	zgc:112083	99	40.354	ENSAMXG00000003514	hinfp	78	46.649	Astyanax_mexicanus
ENSKMAG00000019874	zgc:112083	98	44.334	ENSCPBG00000012908	-	97	44.334	Chrysemys_picta_bellii
ENSKMAG00000019874	zgc:112083	78	45.960	ENSCVAG00000012763	hinfp	80	46.717	Cyprinodon_variegatus
ENSKMAG00000019874	zgc:112083	98	40.637	ENSDARG00000004851	hinfp	78	46.373	Danio_rerio
ENSKMAG00000019874	zgc:112083	99	63.889	ENSDARG00000037405	zgc:112083	99	62.598	Danio_rerio
ENSKMAG00000019874	zgc:112083	83	41.124	ENSEBUG00000007941	hinfp	86	41.395	Eptatretus_burgeri
ENSKMAG00000019874	zgc:112083	79	43.672	ENSFHEG00000003465	hinfp	82	43.243	Fundulus_heteroclitus
ENSKMAG00000019874	zgc:112083	75	47.258	ENSGMOG00000005447	hinfp	95	47.258	Gadus_morhua
ENSKMAG00000019874	zgc:112083	77	44.416	ENSGAFG00000004250	hinfp	80	44.924	Gambusia_affinis
ENSKMAG00000019874	zgc:112083	75	43.557	ENSGACG00000020411	hinfp	96	43.223	Gasterosteus_aculeatus
ENSKMAG00000019874	zgc:112083	98	45.129	ENSGAGG00000009315	-	97	45.129	Gopherus_agassizii
ENSKMAG00000019874	zgc:112083	77	46.231	ENSGGOG00000008087	HINFP	78	46.420	Gorilla_gorilla
ENSKMAG00000019874	zgc:112083	83	42.553	ENSHBUG00000023339	hinfp	79	44.961	Haplochromis_burtoni
ENSKMAG00000019874	zgc:112083	87	41.667	ENSHCOG00000002113	hinfp	83	44.500	Hippocampus_comes
ENSKMAG00000019874	zgc:112083	98	42.012	ENSIPUG00000008809	hinfp	97	40.514	Ictalurus_punctatus
ENSKMAG00000019874	zgc:112083	89	39.914	ENSLBEG00000024749	hinfp	83	43.750	Labrus_bergylta
ENSKMAG00000019874	zgc:112083	100	64.118	ENSLOCG00000004586	zgc:112083	98	63.922	Lepisosteus_oculatus
ENSKMAG00000019874	zgc:112083	99	42.240	ENSLOCG00000003801	hinfp	80	47.449	Lepisosteus_oculatus
ENSKMAG00000019874	zgc:112083	77	45.865	ENSMFAG00000035740	HINFP	78	46.173	Macaca_fascicularis
ENSKMAG00000019874	zgc:112083	83	42.553	ENSMZEG00005016624	hinfp	79	44.961	Maylandia_zebra
ENSKMAG00000019874	zgc:112083	90	42.308	ENSMGAG00000002682	HINFP	74	46.447	Meleagris_gallopavo
ENSKMAG00000019874	zgc:112083	76	45.641	ENSMMOG00000016620	hinfp	86	43.980	Mola_mola
ENSKMAG00000019874	zgc:112083	98	39.243	ENSMALG00000017304	hinfp	78	45.478	Monopterus_albus
ENSKMAG00000019874	zgc:112083	83	42.553	ENSNBRG00000020685	hinfp	79	44.961	Neolamprologus_brichardi
ENSKMAG00000019874	zgc:112083	77	46.366	ENSNLEG00000007387	HINFP	78	46.667	Nomascus_leucogenys
ENSKMAG00000019874	zgc:112083	76	44.961	ENSONIG00000005379	hinfp	79	44.961	Oreochromis_niloticus
ENSKMAG00000019874	zgc:112083	77	45.570	ENSOMEG00000000955	hinfp	81	45.570	Oryzias_melastigma
ENSKMAG00000019874	zgc:112083	77	46.617	ENSPPAG00000042389	HINFP	78	46.420	Pan_paniscus
ENSKMAG00000019874	zgc:112083	77	46.115	ENSPTRG00000004372	HINFP	78	46.420	Pan_troglodytes
ENSKMAG00000019874	zgc:112083	99	40.546	ENSPKIG00000018654	hinfp	77	45.758	Paramormyrops_kingsleyae
ENSKMAG00000019874	zgc:112083	100	64.510	ENSPKIG00000012562	zgc:112083	100	63.725	Paramormyrops_kingsleyae
ENSKMAG00000019874	zgc:112083	100	77.539	ENSPMGG00000011183	zgc:112083	100	77.432	Periophthalmus_magnuspinnatus
ENSKMAG00000019874	zgc:112083	77	44.416	ENSPFOG00000010093	hinfp	85	44.096	Poecilia_formosa
ENSKMAG00000019874	zgc:112083	77	44.670	ENSPLAG00000015218	hinfp	85	44.337	Poecilia_latipinna
ENSKMAG00000019874	zgc:112083	77	44.416	ENSPMEG00000008910	hinfp	86	43.885	Poecilia_mexicana
ENSKMAG00000019874	zgc:112083	77	44.416	ENSPREG00000022954	hinfp	86	42.925	Poecilia_reticulata
ENSKMAG00000019874	zgc:112083	83	42.553	ENSPNYG00000017332	hinfp	79	44.961	Pundamilia_nyererei
ENSKMAG00000019874	zgc:112083	99	63.834	ENSPNAG00000013245	zgc:112083	99	63.439	Pygocentrus_nattereri
ENSKMAG00000019874	zgc:112083	99	40.594	ENSPNAG00000012579	hinfp	78	46.512	Pygocentrus_nattereri
ENSKMAG00000019874	zgc:112083	99	40.541	ENSSFOG00015008241	hinfp	77	46.447	Scleropages_formosus
ENSKMAG00000019874	zgc:112083	100	65.490	ENSSFOG00015002582	zgc:112083	100	63.922	Scleropages_formosus
ENSKMAG00000019874	zgc:112083	83	42.326	ENSSMAG00000014076	hinfp	84	43.269	Scophthalmus_maximus
ENSKMAG00000019874	zgc:112083	83	43.590	ENSSDUG00000010783	hinfp	86	43.662	Seriola_dumerili
ENSKMAG00000019874	zgc:112083	83	43.590	ENSSLDG00000018686	hinfp	86	43.662	Seriola_lalandi_dorsalis
ENSKMAG00000019874	zgc:112083	98	36.310	ENSSPAG00000016177	hinfp	84	39.089	Stegastes_partitus
ENSKMAG00000019874	zgc:112083	82	43.972	ENSTRUG00000016621	hinfp	89	44.363	Takifugu_rubripes
ENSKMAG00000019874	zgc:112083	76	46.036	ENSTNIG00000011746	hinfp	96	46.292	Tetraodon_nigroviridis
ENSKMAG00000019874	zgc:112083	77	44.670	ENSXCOG00000006699	hinfp	79	45.431	Xiphophorus_couchianus
ENSKMAG00000019874	zgc:112083	77	44.670	ENSXMAG00000005943	hinfp	83	45.431	Xiphophorus_maculatus