EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000019925 (Gene tree)
Gene ID: 108232203
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 10839 bases
Position: chrLWHD01000015.1:2040508-2051346
Accession: 108232203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000026872	PAP_assoc	PF03828.19	6.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000027211	-	4789	XM_017409826	ENSKMAP00000026872	820 (aa)	XP_017265315	UPI0007F8B34C

Gene Model

Click here to download ENSKMAG00000019925's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000019925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000019925	-	78	50.430	ENSKMAG00000000725	tent4a	79	72.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000019925	-	52	67.742	ENSG00000112941	TENT4A	100	77.778	Homo_sapiens
ENSKMAG00000019925	-	61	64.544	ENSAPOG00000002178	tent4a	78	51.250	Acanthochromis_polyacanthus
ENSKMAG00000019925	-	100	74.789	ENSAPOG00000018106	-	99	74.306	Acanthochromis_polyacanthus
ENSKMAG00000019925	-	67	52.951	ENSAMEG00000002806	TENT4A	99	50.963	Ailuropoda_melanoleuca
ENSKMAG00000019925	-	76	64.469	ENSACIG00000014234	-	87	62.833	Amphilophus_citrinellus
ENSKMAG00000019925	-	53	58.969	ENSACIG00000013326	tent4a	69	67.485	Amphilophus_citrinellus
ENSKMAG00000019925	-	100	72.944	ENSAOCG00000013501	-	99	73.182	Amphiprion_ocellaris
ENSKMAG00000019925	-	100	72.889	ENSAPEG00000015522	-	99	73.365	Amphiprion_percula
ENSKMAG00000019925	-	100	73.325	ENSATEG00000024197	-	99	72.129	Anabas_testudineus
ENSKMAG00000019925	-	78	51.768	ENSATEG00000006898	tent4a	76	76.433	Anabas_testudineus
ENSKMAG00000019925	-	50	67.969	ENSANAG00000037806	TENT4A	54	68.170	Aotus_nancymaae
ENSKMAG00000019925	-	53	62.125	ENSACLG00000014408	tent4a	98	48.640	Astatotilapia_calliptera
ENSKMAG00000019925	-	100	67.849	ENSACLG00000016812	-	99	67.967	Astatotilapia_calliptera
ENSKMAG00000019925	-	64	50.549	ENSBTAG00000003381	TENT4A	61	75.082	Bos_taurus
ENSKMAG00000019925	-	52	67.742	ENSCJAG00000008742	TENT4A	56	68.170	Callithrix_jacchus
ENSKMAG00000019925	-	67	53.125	ENSCAFG00000010319	TENT4A	99	50.788	Canis_familiaris
ENSKMAG00000019925	-	67	53.125	ENSCAFG00020022835	TENT4A	99	50.788	Canis_lupus_dingo
ENSKMAG00000019925	-	67	53.147	ENSCHIG00000017328	TENT4A	56	75.082	Capra_hircus
ENSKMAG00000019925	-	67	51.045	ENSTSYG00000000631	TENT4A	56	75.082	Carlito_syrichta
ENSKMAG00000019925	-	77	49.396	ENSCPOG00000009006	TENT4A	56	75.578	Cavia_porcellus
ENSKMAG00000019925	-	52	67.742	ENSCCAG00000006730	TENT4A	56	75.410	Cebus_capucinus
ENSKMAG00000019925	-	80	63.636	ENSCPBG00000006514	TENT4A	99	44.444	Chrysemys_picta_bellii
ENSKMAG00000019925	-	82	67.742	ENSCGRG00001014344	Tent4a	51	67.905	Cricetulus_griseus_chok1gshd
ENSKMAG00000019925	-	100	74.078	ENSCSEG00000003887	-	99	73.722	Cynoglossus_semilaevis
ENSKMAG00000019925	-	61	70.000	ENSCSEG00000011470	tent4a	59	63.274	Cynoglossus_semilaevis
ENSKMAG00000019925	-	55	90.354	ENSCVAG00000008463	-	96	90.354	Cyprinodon_variegatus
ENSKMAG00000019925	-	76	50.234	ENSCVAG00000021741	tent4a	68	61.369	Cyprinodon_variegatus
ENSKMAG00000019925	-	64	59.854	ENSDARG00000062114	tent4a	98	52.960	Danio_rerio
ENSKMAG00000019925	-	67	52.962	ENSEASG00005018583	TENT4A	61	71.646	Equus_asinus_asinus
ENSKMAG00000019925	-	77	51.149	ENSECAG00000010134	TENT4A	50	65.500	Equus_caballus
ENSKMAG00000019925	-	55	64.693	ENSELUG00000024141	tent4a	72	71.069	Esox_lucius
ENSKMAG00000019925	-	100	72.892	ENSFHEG00000006086	-	99	72.771	Fundulus_heteroclitus
ENSKMAG00000019925	-	99	44.820	ENSFHEG00000017843	tent4a	55	68.435	Fundulus_heteroclitus
ENSKMAG00000019925	-	100	74.880	ENSGAFG00000000179	-	99	74.279	Gambusia_affinis
ENSKMAG00000019925	-	100	67.730	ENSHBUG00000001038	-	99	67.849	Haplochromis_burtoni
ENSKMAG00000019925	-	53	61.894	ENSHBUG00000022127	tent4a	55	69.597	Haplochromis_burtoni
ENSKMAG00000019925	-	50	67.742	ENSHGLG00000005593	TENT4A	56	75.082	Heterocephalus_glaber_female
ENSKMAG00000019925	-	52	88.782	ENSHCOG00000000915	-	89	88.782	Hippocampus_comes
ENSKMAG00000019925	-	67	51.399	ENSJJAG00000007205	Tent4a	56	75.082	Jaculus_jaculus
ENSKMAG00000019925	-	100	73.852	ENSLBEG00000021596	-	99	73.969	Labrus_bergylta
ENSKMAG00000019925	-	64	60.478	ENSLOCG00000008727	tent4a	77	54.193	Lepisosteus_oculatus
ENSKMAG00000019925	-	52	67.742	ENSMMUG00000013189	TENT4A	51	68.170	Macaca_mulatta
ENSKMAG00000019925	-	52	67.742	ENSMNEG00000029090	TENT4A	55	68.170	Macaca_nemestrina
ENSKMAG00000019925	-	99	71.905	ENSMAMG00000024030	-	99	71.190	Mastacembelus_armatus
ENSKMAG00000019925	-	59	67.529	ENSMAMG00000004931	tent4a	54	70.130	Mastacembelus_armatus
ENSKMAG00000019925	-	100	67.494	ENSMZEG00005001805	-	99	67.612	Maylandia_zebra
ENSKMAG00000019925	-	67	50.862	ENSMICG00000016562	TENT4A	56	75.082	Microcebus_murinus
ENSKMAG00000019925	-	79	48.260	ENSMMOG00000021181	tent4a	75	66.838	Mola_mola
ENSKMAG00000019925	-	55	84.227	ENSMMOG00000008539	-	98	84.227	Mola_mola
ENSKMAG00000019925	-	83	75.403	ENSMALG00000018694	-	98	75.403	Monopterus_albus
ENSKMAG00000019925	-	60	64.574	ENSMALG00000002692	tent4a	53	68.831	Monopterus_albus
ENSKMAG00000019925	-	68	67.742	MGP_CAROLIEiJ_G0018689	-	77	51.530	Mus_caroli
ENSKMAG00000019925	-	82	67.742	ENSMUSG00000034575	Tent4a	56	75.082	Mus_musculus
ENSKMAG00000019925	-	82	67.742	MGP_PahariEiJ_G0015770	-	58	67.905	Mus_pahari
ENSKMAG00000019925	-	82	67.742	MGP_SPRETEiJ_G0019573	-	56	59.682	Mus_spretus
ENSKMAG00000019925	-	67	52.778	ENSMPUG00000007530	TENT4A	61	71.341	Mustela_putorius_furo
ENSKMAG00000019925	-	67	51.916	ENSMLUG00000004424	TENT4A	56	75.082	Myotis_lucifugus
ENSKMAG00000019925	-	67	51.748	ENSNGAG00000006352	Tent4a	56	75.082	Nannospalax_galili
ENSKMAG00000019925	-	54	85.256	ENSNBRG00000009218	TENT4A	92	85.256	Neolamprologus_brichardi
ENSKMAG00000019925	-	58	41.785	ENSMEUG00000004007	TENT4A	64	51.148	Notamacropus_eugenii
ENSKMAG00000019925	-	67	51.394	ENSODEG00000018357	TENT4A	56	75.082	Octodon_degus
ENSKMAG00000019925	-	67	53.860	ENSOANG00000011579	-	56	76.393	Ornithorhynchus_anatinus
ENSKMAG00000019925	-	58	61.191	ENSORLG00000025175	tent4a	74	52.201	Oryzias_latipes
ENSKMAG00000019925	-	100	66.989	ENSORLG00000027691	-	99	66.747	Oryzias_latipes
ENSKMAG00000019925	-	58	61.191	ENSORLG00020019731	tent4a	74	52.201	Oryzias_latipes_hni
ENSKMAG00000019925	-	100	67.473	ENSORLG00020022661	-	99	67.231	Oryzias_latipes_hni
ENSKMAG00000019925	-	100	64.377	ENSORLG00015006327	-	99	64.144	Oryzias_latipes_hsok
ENSKMAG00000019925	-	76	52.147	ENSOMEG00000013540	tent4a	63	51.803	Oryzias_melastigma
ENSKMAG00000019925	-	55	83.333	ENSOMEG00000014052	-	98	83.333	Oryzias_melastigma
ENSKMAG00000019925	-	67	53.054	ENSOARG00000014904	TENT4A	56	75.082	Ovis_aries
ENSKMAG00000019925	-	67	51.568	ENSPPRG00000002409	TENT4A	99	50.000	Panthera_pardus
ENSKMAG00000019925	-	59	62.222	ENSPKIG00000024130	tent4a	59	69.010	Paramormyrops_kingsleyae
ENSKMAG00000019925	-	99	46.021	ENSPKIG00000020499	-	74	52.997	Paramormyrops_kingsleyae
ENSKMAG00000019925	-	67	52.531	ENSPSIG00000015964	TENT4A	99	52.817	Pelodiscus_sinensis
ENSKMAG00000019925	-	55	64.381	ENSPMGG00000004132	tent4a	64	68.217	Periophthalmus_magnuspinnatus
ENSKMAG00000019925	-	75	71.292	ENSPMGG00000007999	TENT4A	97	88.462	Periophthalmus_magnuspinnatus
ENSKMAG00000019925	-	67	51.742	ENSPEMG00000024121	Tent4a	56	75.082	Peromyscus_maniculatus_bairdii
ENSKMAG00000019925	-	78	49.715	ENSPFOG00000003961	tent4a	60	67.532	Poecilia_formosa
ENSKMAG00000019925	-	100	75.540	ENSPFOG00000016762	-	99	74.940	Poecilia_formosa
ENSKMAG00000019925	-	87	45.912	ENSPLAG00000007134	tent4a	57	67.532	Poecilia_latipinna
ENSKMAG00000019925	-	73	78.869	ENSPLAG00000004468	TENT4A	98	92.780	Poecilia_latipinna
ENSKMAG00000019925	-	100	74.123	ENSPMEG00000009954	-	99	73.398	Poecilia_mexicana
ENSKMAG00000019925	-	54	64.792	ENSPREG00000017547	tent4a	72	64.461	Poecilia_reticulata
ENSKMAG00000019925	-	100	62.321	ENSPREG00000011257	TENT4A	98	78.227	Poecilia_reticulata
ENSKMAG00000019925	-	67	51.130	ENSPVAG00000000511	TENT4A	57	74.098	Pteropus_vampyrus
ENSKMAG00000019925	-	57	81.090	ENSPNYG00000008164	TENT4A	99	81.090	Pundamilia_nyererei
ENSKMAG00000019925	-	53	62.125	ENSPNYG00000010769	tent4a	55	69.597	Pundamilia_nyererei
ENSKMAG00000019925	-	99	46.403	ENSPNAG00000011603	TENT4A	99	44.205	Pygocentrus_nattereri
ENSKMAG00000019925	-	67	52.332	ENSSHAG00000012100	TENT4A	56	76.393	Sarcophilus_harrisii
ENSKMAG00000019925	-	52	67.431	ENSSFOG00015001756	tent4a	82	68.704	Scleropages_formosus
ENSKMAG00000019925	-	53	63.409	ENSSMAG00000020671	tent4a	98	50.157	Scophthalmus_maximus
ENSKMAG00000019925	-	56	91.667	ENSSMAG00000003989	-	98	91.667	Scophthalmus_maximus
ENSKMAG00000019925	-	100	76.379	ENSSDUG00000014825	-	99	76.019	Seriola_dumerili
ENSKMAG00000019925	-	62	64.592	ENSSDUG00000002157	tent4a	53	69.351	Seriola_dumerili
ENSKMAG00000019925	-	53	63.858	ENSSLDG00000004371	tent4a	67	68.217	Seriola_lalandi_dorsalis
ENSKMAG00000019925	-	100	76.859	ENSSLDG00000019746	-	99	76.499	Seriola_lalandi_dorsalis
ENSKMAG00000019925	-	99	75.060	ENSSPAG00000017401	-	99	74.217	Stegastes_partitus
ENSKMAG00000019925	-	93	75.714	ENSTRUG00000006698	-	98	74.286	Takifugu_rubripes
ENSKMAG00000019925	-	51	65.429	ENSTRUG00000012098	tent4a	72	76.038	Takifugu_rubripes
ENSKMAG00000019925	-	67	52.465	ENSTTRG00000012547	TENT4A	58	73.248	Tursiops_truncatus
ENSKMAG00000019925	-	69	53.322	ENSUAMG00000024711	TENT4A	58	71.091	Ursus_americanus
ENSKMAG00000019925	-	67	52.951	ENSUMAG00000021088	TENT4A	99	50.264	Ursus_maritimus
ENSKMAG00000019925	-	67	53.125	ENSVVUG00000017702	TENT4A	99	50.788	Vulpes_vulpes
ENSKMAG00000019925	-	56	85.852	ENSXMAG00000026228	TENT4A	99	87.179	Xiphophorus_maculatus
ENSKMAG00000019925	-	81	62.162	ENSXMAG00000013580	tent4a	80	72.755	Xiphophorus_maculatus