EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000020038 (Gene tree)
Gene ID
108243817
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
10133 bases
Position
chrLWHD01000124.1:513052-523184
Accession
108243817
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000027008MMR_HSR1PF01926.236.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000027347-2292XM_017429508ENSKMAP00000027008220 (aa)XP_017284997UPI0007F90C50
Gene Model
Click here to download ENSKMAG00000020038's gene model file
Pathways
Pathway IDPathway NameSource
kmr04144EndocytosisKEGG
kmr04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000020038's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000020038rab5c8941.667ENSKMAG00000006170-7547.239
ENSKMAG00000020038rab5c7339.130ENSKMAG00000020392rab157639.130
ENSKMAG00000020038rab5c8831.034ENSKMAG00000019341rab34b6333.750
ENSKMAG00000020038rab5c7447.239ENSKMAG00000009033rab11bb7547.239
ENSKMAG00000020038rab5c7637.791ENSKMAG00000020056rab127237.791
ENSKMAG00000020038rab5c8942.347ENSKMAG00000006810rab1ba8146.626
ENSKMAG00000020038rab5c7843.750ENSKMAG00000006812RAB7A9939.806
ENSKMAG00000020038rab5c9539.423ENSKMAG00000015507rab6ba8442.857
ENSKMAG00000020038rab5c8038.418ENSKMAG00000001908rab138641.615
ENSKMAG00000020038rab5c8933.990ENSKMAG00000003646-9732.178
ENSKMAG00000020038rab5c7235.443ENSKMAG00000018270rab236837.500
ENSKMAG00000020038rab5c7437.195ENSKMAG00000007267rab42a7537.195
ENSKMAG00000020038rab5c7536.747ENSKMAG00000008625RAB39B7737.195
ENSKMAG00000020038rab5c7447.239ENSKMAG00000011905rab11a7647.239
ENSKMAG00000020038rab5c6637.748ENSKMAG00000020034-5137.748
ENSKMAG00000020038rab5c9883.796ENSKMAG00000005111rab5aa9982.870
ENSKMAG00000020038rab5c7942.529ENSKMAG00000002545-8242.529
ENSKMAG00000020038rab5c7341.975ENSKMAG00000012657-7341.975
ENSKMAG00000020038rab5c7032.468ENSKMAG00000020448rheb8332.468
ENSKMAG00000020038rab5c7643.713ENSKMAG00000004439rab308243.713
ENSKMAG00000020038rab5c5431.148ENSKMAG00000006196arl8ba6231.148
ENSKMAG00000020038rab5c8135.602ENSKMAG00000003105rab33ba8834.300
ENSKMAG00000020038rab5c9044.118ENSKMAG00000004945rab25a8049.112
ENSKMAG00000020038rab5c8942.564ENSKMAG00000017357rab1ab8047.239
ENSKMAG00000020038rab5c5431.967ENSKMAG00000020329arl8bb6231.967
ENSKMAG00000020038rab5c8634.197ENSKMAG00000018973-7036.364
ENSKMAG00000020038rab5c7833.146ENSKMAG00000001922Ha-ras8732.335
ENSKMAG00000020038rab5c8433.690ENSKMAG00000012723rabl27036.025
ENSKMAG00000020038rab5c7642.262ENSKMAG00000009799rab2a7643.478
ENSKMAG00000020038rab5c9991.781ENSKMAG00000017417-9991.781
ENSKMAG00000020038rab5c8939.614ENSKMAG00000020250rab4a7643.478
ENSKMAG00000020038rab5c6836.709ENSKMAG00000017662rab9a7636.709
ENSKMAG00000020038rab5c8634.500ENSKMAG00000012778si:dkey-34d22.57535.542
ENSKMAG00000020038rab5c7147.771ENSKMAG00000015516rab11al7347.771
ENSKMAG00000020038rab5c7335.976ENSKMAG00000021039si:dkey-13a21.46835.976
ENSKMAG00000020038rab5c7942.697ENSKMAG00000020013-8642.697
ENSKMAG00000020038rab5c8834.653ENSKMAG00000019964rab9b9734.158
ENSKMAG00000020038rab5c6632.877ENSKMAG00000003080si:cabz01085950.17232.877
ENSKMAG00000020038rab5c8231.183ENSKMAG00000020733rras8132.298
ENSKMAG00000020038rab5c8936.923ENSKMAG00000006854rab35b9636.923
ENSKMAG00000020038rab5c7447.239ENSKMAG00000006082-7447.826
ENSKMAG00000020038rab5c7240.373ENSKMAG00000001191RAB157638.994
ENSKMAG00000020038rab5c7752.353ENSKMAG00000014705rab22a8453.374
ENSKMAG00000020038rab5c7243.038ENSKMAG00000013146-8243.038
ENSKMAG00000020038rab5c9040.909ENSKMAG00000017487rab149240.909
ENSKMAG00000020038rab5c7332.934ENSKMAG00000017150-7432.934
ENSKMAG00000020038rab5c8832.039ENSKMAG00000019647rab34a6033.750
ENSKMAG00000020038rab5c7638.690ENSKMAG00000003494si:dkey-16l2.169634.826
ENSKMAG00000020038rab5c8943.590ENSKMAG00000014038-7747.239
ENSKMAG00000020038rab5c8942.157ENSKMAG00000015488rab25b7846.626
ENSKMAG00000020038rab5c8642.328ENSKMAG00000011301-8742.328
ENSKMAG00000020038rab5c7843.860ENSKMAG00000009856zgc:1719277545.342
ENSKMAG00000020038rab5c7338.554ENSKMAG00000006593rab33a7838.554
ENSKMAG00000020038rab5c7544.242ENSKMAG00000007364rab18b8044.242
ENSKMAG00000020038rab5c7533.735ENSKMAG00000003938kras9032.749
ENSKMAG00000020038rab5c7539.766ENSKMAG00000002862zgc:1015597339.766
ENSKMAG00000020038rab5c5431.148ENSKMAG00000002898arl8a6131.148
ENSKMAG00000020038rab5c8839.286ENSKMAG00000011278rab6bb8441.714
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000020038rab5c9890.741ENSG00000108774RAB5C10095.604Homo_sapiens
ENSKMAG00000020038rab5c10096.818ENSAPOG00000016864rab5c10096.818Acanthochromis_polyacanthus
ENSKMAG00000020038rab5c9890.741ENSAMEG00000006003RAB5C9988.889Ailuropoda_melanoleuca
ENSKMAG00000020038rab5c10096.818ENSACIG00000010896rab5c10096.818Amphilophus_citrinellus
ENSKMAG00000020038rab5c10096.818ENSAOCG00000016614rab5c10096.818Amphiprion_ocellaris
ENSKMAG00000020038rab5c9896.744ENSAPEG00000017868-9996.744Amphiprion_percula
ENSKMAG00000020038rab5c9998.618ENSATEG00000001937rab5c9998.618Anabas_testudineus
ENSKMAG00000020038rab5c9392.683ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSKMAG00000020038rab5c9689.623ENSACLG00000008615-10088.288Astatotilapia_calliptera
ENSKMAG00000020038rab5c10095.909ENSACLG00000002706rab5c10095.909Astatotilapia_calliptera
ENSKMAG00000020038rab5c9591.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSKMAG00000020038rab5c10097.285ENSAMXG00000043717rab5c10097.285Astyanax_mexicanus
ENSKMAG00000020038rab5c9890.741ENSBTAG00000006982RAB5C9988.426Bos_taurus
ENSKMAG00000020038rab5c9874.194WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSKMAG00000020038rab5c9890.741ENSCAFG00000015629RAB5C9988.889Canis_familiaris
ENSKMAG00000020038rab5c9890.741ENSCAFG00020013537RAB5C9988.889Canis_lupus_dingo
ENSKMAG00000020038rab5c9890.741ENSCHIG00000012960RAB5C9988.426Capra_hircus
ENSKMAG00000020038rab5c9891.204ENSTSYG00000030531RAB5C9988.889Carlito_syrichta
ENSKMAG00000020038rab5c9890.741ENSCCAG00000025940RAB5C9988.426Cebus_capucinus
ENSKMAG00000020038rab5c9890.741ENSCATG00000040873RAB5C9988.889Cercocebus_atys
ENSKMAG00000020038rab5c9890.278ENSCLAG00000016650RAB5C9987.963Chinchilla_lanigera
ENSKMAG00000020038rab5c8194.382ENSCHOG00000009886RAB5C10094.382Choloepus_hoffmanni
ENSKMAG00000020038rab5c9976.147ENSCING00000003340-9974.654Ciona_intestinalis
ENSKMAG00000020038rab5c9976.106ENSCSAVG00000000613-9984.568Ciona_savignyi
ENSKMAG00000020038rab5c9890.741ENSCGRG00001014226Rab5c9988.426Cricetulus_griseus_chok1gshd
ENSKMAG00000020038rab5c9890.741ENSCGRG00000007534Rab5c9988.426Cricetulus_griseus_crigri
ENSKMAG00000020038rab5c10095.909ENSCSEG00000017024rab5c10095.909Cynoglossus_semilaevis
ENSKMAG00000020038rab5c10097.273ENSCVAG00000009550rab5c10097.273Cyprinodon_variegatus
ENSKMAG00000020038rab5c9890.741ENSDNOG00000038853RAB5C9987.963Dasypus_novemcinctus
ENSKMAG00000020038rab5c9891.667ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSKMAG00000020038rab5c9077.273FBgn0014010Rab58481.081Drosophila_melanogaster
ENSKMAG00000020038rab5c8585.484ENSEBUG00000014794rab5c8885.484Eptatretus_burgeri
ENSKMAG00000020038rab5c9890.741ENSEASG00005009281RAB5C9988.889Equus_asinus_asinus
ENSKMAG00000020038rab5c9891.204ENSECAG00000025054RAB5C9988.889Equus_caballus
ENSKMAG00000020038rab5c9890.741ENSEEUG00000002790RAB5C9988.426Erinaceus_europaeus
ENSKMAG00000020038rab5c9894.907ENSELUG00000018516rab5c9994.907Esox_lucius
ENSKMAG00000020038rab5c10090.000ENSELUG00000010439-10090.000Esox_lucius
ENSKMAG00000020038rab5c9890.741ENSFCAG00000002148RAB5C9988.426Felis_catus
ENSKMAG00000020038rab5c9889.352ENSFDAG00000021541RAB5C9987.500Fukomys_damarensis
ENSKMAG00000020038rab5c9990.868ENSFHEG00000015268-9990.868Fundulus_heteroclitus
ENSKMAG00000020038rab5c10098.636ENSFHEG00000012117rab5c10098.636Fundulus_heteroclitus
ENSKMAG00000020038rab5c10097.273ENSGMOG00000015096rab5c10097.273Gadus_morhua
ENSKMAG00000020038rab5c7688.690ENSGMOG00000001876-9788.690Gadus_morhua
ENSKMAG00000020038rab5c10097.727ENSGAFG00000000884rab5c10097.727Gambusia_affinis
ENSKMAG00000020038rab5c9590.909ENSGAFG00000003642-9988.288Gambusia_affinis
ENSKMAG00000020038rab5c10092.273ENSGACG00000008659rab5c10092.273Gasterosteus_aculeatus
ENSKMAG00000020038rab5c9890.741ENSGGOG00000005472RAB5C9988.889Gorilla_gorilla
ENSKMAG00000020038rab5c10095.909ENSHBUG00000002014rab5c10095.909Haplochromis_burtoni
ENSKMAG00000020038rab5c9689.623ENSHBUG00000006823-10088.288Haplochromis_burtoni
ENSKMAG00000020038rab5c9889.352ENSHGLG00000012067RAB5C9987.037Heterocephalus_glaber_female
ENSKMAG00000020038rab5c9580.952ENSHCOG00000020238-10078.947Hippocampus_comes
ENSKMAG00000020038rab5c9997.717ENSHCOG00000004662rab5c9897.717Hippocampus_comes
ENSKMAG00000020038rab5c9593.780ENSIPUG00000020082rab5c10094.144Ictalurus_punctatus
ENSKMAG00000020038rab5c9890.278ENSSTOG00000006620RAB5C9988.426Ictidomys_tridecemlineatus
ENSKMAG00000020038rab5c9891.204ENSJJAG00000021181Rab5c9988.426Jaculus_jaculus
ENSKMAG00000020038rab5c10090.950ENSLBEG00000010408-10090.950Labrus_bergylta
ENSKMAG00000020038rab5c10097.727ENSLBEG00000004128rab5c10097.727Labrus_bergylta
ENSKMAG00000020038rab5c9892.593ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSKMAG00000020038rab5c9890.741ENSMFAG00000039627RAB5C9988.889Macaca_fascicularis
ENSKMAG00000020038rab5c9890.741ENSMNEG00000000355RAB5C9988.889Macaca_nemestrina
ENSKMAG00000020038rab5c10097.273ENSMAMG00000022322rab5c10097.273Mastacembelus_armatus
ENSKMAG00000020038rab5c9991.781ENSMAMG00000016207-9991.781Mastacembelus_armatus
ENSKMAG00000020038rab5c10095.909ENSMZEG00005022735rab5c10095.909Maylandia_zebra
ENSKMAG00000020038rab5c9689.623ENSMZEG00005021090-10088.288Maylandia_zebra
ENSKMAG00000020038rab5c9891.204ENSMAUG00000015005Rab5c9988.889Mesocricetus_auratus
ENSKMAG00000020038rab5c9891.204ENSMICG00000041608RAB5C9988.889Microcebus_murinus
ENSKMAG00000020038rab5c9891.204ENSMOCG00000018531-9988.426Microtus_ochrogaster
ENSKMAG00000020038rab5c10096.364ENSMMOG00000020621rab5c10096.364Mola_mola
ENSKMAG00000020038rab5c9988.128ENSMALG00000022348-9988.128Monopterus_albus
ENSKMAG00000020038rab5c9890.233ENSMALG00000006052rab5c9790.411Monopterus_albus
ENSKMAG00000020038rab5c9891.204MGP_CAROLIEiJ_G0017184Rab5c9988.889Mus_caroli
ENSKMAG00000020038rab5c9891.204ENSMUSG00000019173Rab5c9988.889Mus_musculus
ENSKMAG00000020038rab5c9891.204MGP_PahariEiJ_G0018314Rab5c9988.889Mus_pahari
ENSKMAG00000020038rab5c9891.204MGP_SPRETEiJ_G0018027Rab5c9988.889Mus_spretus
ENSKMAG00000020038rab5c9890.741ENSMPUG00000010554RAB5C9988.889Mustela_putorius_furo
ENSKMAG00000020038rab5c9890.741ENSNGAG00000010286Rab5c9988.426Nannospalax_galili
ENSKMAG00000020038rab5c9689.623ENSNBRG00000016922-10088.288Neolamprologus_brichardi
ENSKMAG00000020038rab5c10096.818ENSNBRG00000018165rab5c10096.818Neolamprologus_brichardi
ENSKMAG00000020038rab5c8187.640ENSOPRG00000008255RAB5C10087.640Ochotona_princeps
ENSKMAG00000020038rab5c9889.815ENSODEG00000017920RAB5C9987.500Octodon_degus
ENSKMAG00000020038rab5c10096.818ENSONIG00000001113rab5c10096.818Oreochromis_niloticus
ENSKMAG00000020038rab5c9998.618ENSORLG00000003882rab5c9998.618Oryzias_latipes
ENSKMAG00000020038rab5c9998.157ENSORLG00020008388rab5c9998.157Oryzias_latipes_hni
ENSKMAG00000020038rab5c9998.618ENSORLG00015021900rab5c9998.618Oryzias_latipes_hsok
ENSKMAG00000020038rab5c9998.618ENSOMEG00000023078rab5c9998.618Oryzias_melastigma
ENSKMAG00000020038rab5c9891.204ENSOGAG00000009456RAB5C9988.889Otolemur_garnettii
ENSKMAG00000020038rab5c9890.741ENSOARG00000018768RAB5C9988.426Ovis_aries
ENSKMAG00000020038rab5c9890.741ENSPPAG00000037206RAB5C9988.889Pan_paniscus
ENSKMAG00000020038rab5c9890.741ENSPPRG00000005745RAB5C9988.426Panthera_pardus
ENSKMAG00000020038rab5c9890.741ENSPTIG00000008177RAB5C9988.426Panthera_tigris_altaica
ENSKMAG00000020038rab5c9890.741ENSPTRG00000009194RAB5C9988.889Pan_troglodytes
ENSKMAG00000020038rab5c9888.889ENSPKIG00000020112-9988.889Paramormyrops_kingsleyae
ENSKMAG00000020038rab5c9888.889ENSPKIG00000001237-9987.037Paramormyrops_kingsleyae
ENSKMAG00000020038rab5c10092.727ENSPMGG00000010792rab5c9994.419Periophthalmus_magnuspinnatus
ENSKMAG00000020038rab5c9891.204ENSPEMG00000017971Rab5c9988.426Peromyscus_maniculatus_bairdii
ENSKMAG00000020038rab5c9874.654ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSKMAG00000020038rab5c9975.576ENSPMAG00000001399rab5c9975.926Petromyzon_marinus
ENSKMAG00000020038rab5c9877.828ENSPMAG00000000008rab5c8885.417Petromyzon_marinus
ENSKMAG00000020038rab5c9890.741ENSPCIG00000020225-9988.889Phascolarctos_cinereus
ENSKMAG00000020038rab5c10097.727ENSPLAG00000004790rab5c10097.727Poecilia_latipinna
ENSKMAG00000020038rab5c9989.954ENSPLAG00000016333-10089.954Poecilia_latipinna
ENSKMAG00000020038rab5c9691.080ENSPMEG00000012614-10089.238Poecilia_mexicana
ENSKMAG00000020038rab5c10097.727ENSPMEG00000011336rab5c10097.727Poecilia_mexicana
ENSKMAG00000020038rab5c8591.005ENSPREG00000022167-8992.350Poecilia_reticulata
ENSKMAG00000020038rab5c10097.727ENSPREG00000010146rab5c10097.727Poecilia_reticulata
ENSKMAG00000020038rab5c9890.741ENSPPYG00000008398RAB5C9988.889Pongo_abelii
ENSKMAG00000020038rab5c9889.815ENSPCAG00000016412RAB5C9987.500Procavia_capensis
ENSKMAG00000020038rab5c9890.278ENSPCOG00000026327RAB5C9988.426Propithecus_coquereli
ENSKMAG00000020038rab5c9891.204ENSPVAG00000003867RAB5C9988.889Pteropus_vampyrus
ENSKMAG00000020038rab5c10095.909ENSPNYG00000010615rab5c10095.909Pundamilia_nyererei
ENSKMAG00000020038rab5c9689.623ENSPNYG00000015851-10088.288Pundamilia_nyererei
ENSKMAG00000020038rab5c10096.380ENSPNAG00000028138rab5c10096.380Pygocentrus_nattereri
ENSKMAG00000020038rab5c9589.474ENSPNAG00000002218-9889.474Pygocentrus_nattereri
ENSKMAG00000020038rab5c9891.204ENSRNOG00000018568Rab5c9988.889Rattus_norvegicus
ENSKMAG00000020038rab5c9890.741ENSRBIG00000031376RAB5C9988.889Rhinopithecus_bieti
ENSKMAG00000020038rab5c9890.741ENSRROG00000032895RAB5C9988.889Rhinopithecus_roxellana
ENSKMAG00000020038rab5c9890.741ENSSBOG00000032552-9988.426Saimiri_boliviensis_boliviensis
ENSKMAG00000020038rab5c9891.204ENSSHAG00000005267-9989.352Sarcophilus_harrisii
ENSKMAG00000020038rab5c10086.818ENSSFOG00015009988-10086.818Scleropages_formosus
ENSKMAG00000020038rab5c9597.129ENSSMAG00000007323rab5c10095.909Scophthalmus_maximus
ENSKMAG00000020038rab5c10096.818ENSSDUG00000023008rab5c10096.818Seriola_dumerili
ENSKMAG00000020038rab5c10095.909ENSSLDG00000017771rab5c10095.909Seriola_lalandi_dorsalis
ENSKMAG00000020038rab5c9890.741ENSSPUG00000012950-9988.889Sphenodon_punctatus
ENSKMAG00000020038rab5c10098.182ENSSPAG00000006436rab5c10098.182Stegastes_partitus
ENSKMAG00000020038rab5c9890.741ENSSSCG00000032467RAB5C9988.426Sus_scrofa
ENSKMAG00000020038rab5c10096.364ENSTRUG00000015590rab5c10096.364Takifugu_rubripes
ENSKMAG00000020038rab5c9697.156ENSTNIG00000011711rab5c9597.156Tetraodon_nigroviridis
ENSKMAG00000020038rab5c9890.741ENSTBEG00000007092RAB5C9988.889Tupaia_belangeri
ENSKMAG00000020038rab5c9890.278ENSTTRG00000006673RAB5C9987.963Tursiops_truncatus
ENSKMAG00000020038rab5c9890.741ENSUAMG00000024343RAB5C9988.889Ursus_americanus
ENSKMAG00000020038rab5c9890.741ENSUMAG00000023270RAB5C9988.889Ursus_maritimus
ENSKMAG00000020038rab5c10097.727ENSXCOG00000016788rab5c10097.727Xiphophorus_couchianus
ENSKMAG00000020038rab5c9591.388ENSXCOG00000006300-9988.739Xiphophorus_couchianus
ENSKMAG00000020038rab5c9989.498ENSXMAG00000022179-10089.498Xiphophorus_maculatus
ENSKMAG00000020038rab5c10097.727ENSXMAG00000003266rab5c10097.727Xiphophorus_maculatus

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